RNA–Protein interactions for RNA: ENST00000550718.1

GNPTAB-208, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 3

Gene GNPTAB, Length 598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-208ENST00000550718 SNRPNP63162 240 aaKnown RBP10.73□□□□□ -0.69
GNPTAB-208ENST00000550718 ZNF468Q5VIY5 522 aaPredicted RBP10.73□□□□□ -0.69
GNPTAB-208ENST00000550718 CALR3Q96L12 384 aaKnown RBP10.73□□□□□ -0.69
GNPTAB-208ENST00000550718 PPP1R12CQ9BZL4 782 aa10.73□□□□□ -0.69
GNPTAB-208ENST00000550718 HOXB4P17483 251 aaPredicted RBP10.72□□□□□ -0.69
GNPTAB-208ENST00000550718 CD33P20138 364 aa10.72□□□□□ -0.69
GNPTAB-208ENST00000550718 RASA1P20936 1047 aa10.72□□□□□ -0.69
GNPTAB-208ENST00000550718 NEURL1BA8MQ27 555 aa10.71□□□□□ -0.69
GNPTAB-208ENST00000550718 SEC13P55735 322 aa10.71□□□□□ -0.69
GNPTAB-208ENST00000550718 TBCELQ5QJ74 424 aa10.71□□□□□ -0.69
GNPTAB-208ENST00000550718 ZNF594Q96JF6 807 aaPredicted RBP10.71□□□□□ -0.69
GNPTAB-208ENST00000550718 BTBD6Q96KE9 485 aa10.71□□□□□ -0.69
GNPTAB-208ENST00000550718 ANKIB1Q9P2G1 1089 aa10.71□□□□□ -0.69
GNPTAB-208ENST00000550718 LINC00114Q6XXX2 140 aa10.7□□□□□ -0.7
GNPTAB-208ENST00000550718 TSEN2Q8NCE0 465 aaKnown RBP10.7□□□□□ -0.7
GNPTAB-208ENST00000550718 NEUROD4Q9HD90 331 aa10.7□□□□□ -0.7
GNPTAB-208ENST00000550718 AMPD1P23109 780 aa10.69□□□□□ -0.7
GNPTAB-208ENST00000550718 SH3PXD2AQ5TCZ1 1133 aa10.69□□□□□ -0.7
GNPTAB-208ENST00000550718 GPAT2Q6NUI2 795 aa10.69□□□□□ -0.7
GNPTAB-208ENST00000550718 LARP1Q6PKG0 1096 aaKnown RBP10.69□□□□□ -0.7
GNPTAB-208ENST00000550718 LRRC69Q6ZNQ3 347 aa10.69□□□□□ -0.7
GNPTAB-208ENST00000550718 RHPN1Q8TCX5 695 aa10.69□□□□□ -0.7
GNPTAB-208ENST00000550718 KLF15Q9UIH9 416 aa10.69□□□□□ -0.7
GNPTAB-208ENST00000550718 FAM196BA6NMK8 535 aa10.68□□□□□ -0.7
GNPTAB-208ENST00000550718 SFI1A8K8P3 1242 aa10.68□□□□□ -0.7
GNPTAB-208ENST00000550718 C21orf2O43822 256 aa10.68□□□□□ -0.7
GNPTAB-208ENST00000550718 DGKGP49619 791 aa10.68□□□□□ -0.7
GNPTAB-208ENST00000550718 KANK4Q5T7N3 995 aaPredicted RBP10.68□□□□□ -0.7
GNPTAB-208ENST00000550718 FCHSD1Q86WN1 690 aa10.68□□□□□ -0.7
GNPTAB-208ENST00000550718 RRAGCQ9HB90 399 aa10.68□□□□□ -0.7
GNPTAB-208ENST00000550718 PRR12Q9ULL5 1215 aa10.68□□□□□ -0.7
GNPTAB-208ENST00000550718 GNB5O14775 395 aa10.67□□□□□ -0.7
GNPTAB-208ENST00000550718 PTK7Q13308 1070 aa10.67□□□□□ -0.7
GNPTAB-208ENST00000550718 PLA2G4EQ3MJ16 856 aa10.67□□□□□ -0.7
GNPTAB-208ENST00000550718 C2orf49Q9BVC5 232 aaPredicted RBP10.67□□□□□ -0.7
GNPTAB-208ENST00000550718 STRN4Q9NRL3 753 aa10.67□□□□□ -0.7
GNPTAB-208ENST00000550718 ATAD2Q6PL18 1390 aa10.66□□□□□ -0.7
GNPTAB-208ENST00000550718 PPP1R12BO60237 982 aaPredicted RBP10.66□□□□□ -0.7
GNPTAB-208ENST00000550718 KCNQ4P56696 695 aa10.66□□□□□ -0.7
GNPTAB-208ENST00000550718 HIF1AQ16665 826 aa10.66□□□□□ -0.7
GNPTAB-208ENST00000550718 PHACTR1Q9C0D0 580 aa10.66□□□□□ -0.7
GNPTAB-208ENST00000550718 SIN3BO75182 1162 aa10.65□□□□□ -0.7
GNPTAB-208ENST00000550718 CHSY3Q70JA7 882 aa10.65□□□□□ -0.7
GNPTAB-208ENST00000550718 MDFIQ99750 246 aa10.65□□□□□ -0.7
GNPTAB-208ENST00000550718 CRTC2Q53ET0 693 aaPredicted RBP10.64□□□□□ -0.71
GNPTAB-208ENST00000550718 VRTNQ9H8Y1 702 aa10.64□□□□□ -0.71
GNPTAB-208ENST00000550718 NOP53Q9NZM5 478 aaKnown RBP10.64□□□□□ -0.71
GNPTAB-208ENST00000550718 HCN4Q9Y3Q4 1203 aa10.64□□□□□ -0.71
GNPTAB-208ENST00000550718 MSTNO14793 375 aa10.63□□□□□ -0.71
GNPTAB-208ENST00000550718 ITGB2P05107 769 aa10.63□□□□□ -0.71
GNPTAB-208ENST00000550718 PCBP4P57723 403 aaKnown RBP10.63□□□□□ -0.71
GNPTAB-208ENST00000550718 ALDH16A1Q8IZ83 802 aa10.63□□□□□ -0.71
GNPTAB-208ENST00000550718 ELOA3CA0A087WX78 387 aaPredicted RBP10.62□□□□□ -0.71
GNPTAB-208ENST00000550718 ELOA3DA6NLF2 546 aaPredicted RBP10.62□□□□□ -0.71
GNPTAB-208ENST00000550718 ADARB2-AS1A8MUL3 147 aa10.62□□□□□ -0.71
GNPTAB-208ENST00000550718 USP17L15C9J2P7 530 aa10.62□□□□□ -0.71
GNPTAB-208ENST00000550718 USP17L10C9JJH3 530 aa10.62□□□□□ -0.71
GNPTAB-208ENST00000550718 USP17L13C9JLJ4 530 aa10.62□□□□□ -0.71
GNPTAB-208ENST00000550718 USP17L12C9JPN9 530 aa10.62□□□□□ -0.71
GNPTAB-208ENST00000550718 USP17L11C9JVI0 530 aa10.62□□□□□ -0.71
GNPTAB-208ENST00000550718 USP17L21D6R901 530 aa10.62□□□□□ -0.71
GNPTAB-208ENST00000550718 USP17L18D6R9N7 530 aa10.62□□□□□ -0.71
GNPTAB-208ENST00000550718 USP17L22D6RA61 530 aa10.62□□□□□ -0.71
GNPTAB-208ENST00000550718 USP17L17D6RBQ6 530 aa10.62□□□□□ -0.71
GNPTAB-208ENST00000550718 USP17L19D6RCP7 530 aa10.62□□□□□ -0.71
GNPTAB-208ENST00000550718 USP17L20D6RJB6 530 aa10.62□□□□□ -0.71
GNPTAB-208ENST00000550718 COL8A1P27658 744 aa10.62□□□□□ -0.71
GNPTAB-208ENST00000550718 USP17L24Q0WX57 530 aa10.62□□□□□ -0.71
GNPTAB-208ENST00000550718 DPYDQ12882 1025 aa10.62□□□□□ -0.71
GNPTAB-208ENST00000550718 ELOA3BQ3SY89 546 aa10.62□□□□□ -0.71
GNPTAB-208ENST00000550718 SYT9Q86SS6 491 aa10.62□□□□□ -0.71
GNPTAB-208ENST00000550718 ANKMY2Q8IV38 441 aa10.62□□□□□ -0.71
GNPTAB-208ENST00000550718 ELOA3Q8NG57 546 aa10.62□□□□□ -0.71
GNPTAB-208ENST00000550718 SUSD3Q96L08 255 aa10.62□□□□□ -0.71
GNPTAB-208ENST00000550718 IGFBP4P22692 258 aa10.61□□□□□ -0.71
GNPTAB-208ENST00000550718 LMOD1P29536 600 aaPredicted RBP10.61□□□□□ -0.71
GNPTAB-208ENST00000550718 SFSWAPQ12872 951 aaKnown RBP10.61□□□□□ -0.71
GNPTAB-208ENST00000550718 NEUROD1Q13562 356 aa10.61□□□□□ -0.71
GNPTAB-208ENST00000550718 IER5Q5VY09 327 aa10.61□□□□□ -0.71
GNPTAB-208ENST00000550718 SCG3Q8WXD2 468 aaKnown RBP10.61□□□□□ -0.71
GNPTAB-208ENST00000550718 TNFRSF25Q93038 417 aa10.61□□□□□ -0.71
GNPTAB-208ENST00000550718 EFCC1Q9HA90 598 aa10.61□□□□□ -0.71
GNPTAB-208ENST00000550718 BRD7Q9NPI1 651 aa10.61□□□□□ -0.71
GNPTAB-208ENST00000550718 ALAS2P22557 587 aa10.6□□□□□ -0.71
GNPTAB-208ENST00000550718 TYRO3Q06418 890 aa10.6□□□□□ -0.71
GNPTAB-208ENST00000550718 SUZ12Q15022 739 aaKnown RBP10.6□□□□□ -0.71
GNPTAB-208ENST00000550718 CEP63Q96MT8 703 aa10.6□□□□□ -0.71
GNPTAB-208ENST00000550718 SPOCK3Q9BQ16 436 aa10.6□□□□□ -0.71
GNPTAB-208ENST00000550718 KRBA1A5PL33 1030 aa10.59□□□□□ -0.71
GNPTAB-208ENST00000550718 SPEM2Q0P670 501 aa10.59□□□□□ -0.71
GNPTAB-208ENST00000550718 RTN1Q16799 776 aa10.59□□□□□ -0.71
GNPTAB-208ENST00000550718 PROCP04070 461 aa10.58□□□□□ -0.72
GNPTAB-208ENST00000550718 CFAP70Q5T0N1 1121 aa10.58□□□□□ -0.72
GNPTAB-208ENST00000550718 ZNF280CQ8ND82 737 aa10.58□□□□□ -0.72
GNPTAB-208ENST00000550718 HSH2DQ96JZ2 352 aa10.58□□□□□ -0.72
GNPTAB-208ENST00000550718 ARXQ96QS3 562 aa10.58□□□□□ -0.72
GNPTAB-208ENST00000550718 HINFPQ9BQA5 517 aa10.58□□□□□ -0.72
GNPTAB-208ENST00000550718 KCNH4Q9UQ05 1017 aa10.58□□□□□ -0.72
GNPTAB-208ENST00000550718 SLC30A3Q99726 388 aa10.57□□□□□ -0.72
GNPTAB-208ENST00000550718 SUV39H2Q9H5I1 410 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms