RNA–Protein interactions for RNA: ENST00000550716.1

ATP2B1-207, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 1 (best)

Gene ATP2B1, Length 486 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-207ENST00000550716 OSBPP22059 807 aa12.13□□□□□ -0.47
ATP2B1-207ENST00000550716 MPRIPQ6WCQ1 1025 aa12.13□□□□□ -0.47
ATP2B1-207ENST00000550716 VPS9D1Q9Y2B5 631 aa12.13□□□□□ -0.47
ATP2B1-207ENST00000550716 KIF24Q5T7B8 1368 aa12.12□□□□□ -0.47
ATP2B1-207ENST00000550716 C5P01031 1676 aa12.12□□□□□ -0.47
ATP2B1-207ENST00000550716 RNF166Q96A37 237 aaPredicted RBP12.11□□□□□ -0.47
ATP2B1-207ENST00000550716 PKD1L3Q7Z443 1732 aa12.11□□□□□ -0.47
ATP2B1-207ENST00000550716 PPM1GO15355 546 aaPredicted RBP12.1□□□□□ -0.47
ATP2B1-207ENST00000550716 HRO43593 1189 aa12.1□□□□□ -0.47
ATP2B1-207ENST00000550716 PROX2Q3B8N5 592 aa12.1□□□□□ -0.47
ATP2B1-207ENST00000550716 PIGBQ92521 554 aa12.1□□□□□ -0.47
ATP2B1-207ENST00000550716 SLC4A5Q9BY07 1137 aa12.1□□□□□ -0.47
ATP2B1-207ENST00000550716 CDHR5Q9HBB8 845 aa12.1□□□□□ -0.47
ATP2B1-207ENST00000550716 ANKRD26Q9UPS8 1709 aa12.1□□□□□ -0.47
ATP2B1-207ENST00000550716 C1QTNF8P60827 252 aa12.09□□□□□ -0.47
ATP2B1-207ENST00000550716 EYA1Q99502 592 aa12.09□□□□□ -0.47
ATP2B1-207ENST00000550716 CHD4Q14839 1912 aa12.09□□□□□ -0.47
ATP2B1-207ENST00000550716 C4BP0C0L5 1744 aa12.08□□□□□ -0.47
ATP2B1-207ENST00000550716 SENP3-EIF4A1A0A087X0R7 540 aa12.08□□□□□ -0.48
ATP2B1-207ENST00000550716 CDCA8Q53HL2 280 aa12.08□□□□□ -0.48
ATP2B1-207ENST00000550716 LINC00116Q8NCU8 138 aa12.08□□□□□ -0.48
ATP2B1-207ENST00000550716 POLKQ9UBT6 870 aa12.08□□□□□ -0.48
ATP2B1-207ENST00000550716 WASHC2AQ641Q2 1341 aa12.08□□□□□ -0.48
ATP2B1-207ENST00000550716 CEP350Q5VT06 3117 aa12.07□□□□□ -0.48
ATP2B1-207ENST00000550716 TAF1LQ8IZX4 1826 aa12.07□□□□□ -0.48
ATP2B1-207ENST00000550716 TNNT2P45379 298 aaPredicted RBP12.06□□□□□ -0.48
ATP2B1-207ENST00000550716 ITPK1Q13572 414 aa12.06□□□□□ -0.48
ATP2B1-207ENST00000550716 CCER1Q8TC90 406 aaPredicted RBP12.06□□□□□ -0.48
ATP2B1-207ENST00000550716 AK7Q96M32 723 aa12.06□□□□□ -0.48
ATP2B1-207ENST00000550716 POLR3GLQ9BT43 218 aa12.06□□□□□ -0.48
ATP2B1-207ENST00000550716 WWC3Q9ULE0 1092 aa12.06□□□□□ -0.48
ATP2B1-207ENST00000550716 ASAP1Q9ULH1 1129 aa12.06□□□□□ -0.48
ATP2B1-207ENST00000550716 MAP2P11137 1827 aaKnown RBP12.06□□□□□ -0.48
ATP2B1-207ENST00000550716 ITGB4P16144 1822 aa12.06□□□□□ -0.48
ATP2B1-207ENST00000550716 CLSPNQ9HAW4 1339 aa12.06□□□□□ -0.48
ATP2B1-207ENST00000550716 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.05□□□□□ -0.48
ATP2B1-207ENST00000550716 LOC102724428A0A0B4J2F2 783 aa12.05□□□□□ -0.48
ATP2B1-207ENST00000550716 PHKG2P15735 406 aa12.05□□□□□ -0.48
ATP2B1-207ENST00000550716 SIK1P57059 783 aa12.05□□□□□ -0.48
ATP2B1-207ENST00000550716 EIF4A2Q14240 407 aaKnown RBP12.05□□□□□ -0.48
ATP2B1-207ENST00000550716 SMARCC1Q92922 1105 aaPredicted RBP12.05□□□□□ -0.48
ATP2B1-207ENST00000550716 ATP10DQ9P241 1426 aa12.04□□□□□ -0.48
ATP2B1-207ENST00000550716 GIGYF1O75420 1035 aaPredicted RBP12.04□□□□□ -0.48
ATP2B1-207ENST00000550716 SPG7Q9UQ90 795 aa12.04□□□□□ -0.48
ATP2B1-207ENST00000550716 KDRP35968 1356 aa12.04□□□□□ -0.48
ATP2B1-207ENST00000550716 UBR3Q6ZT12 1888 aa12.04□□□□□ -0.48
ATP2B1-207ENST00000550716 TESPA1A2RU30 521 aaPredicted RBP12.03□□□□□ -0.48
ATP2B1-207ENST00000550716 FLAD1Q8NFF5 587 aa12.03□□□□□ -0.48
ATP2B1-207ENST00000550716 SLC4A9Q96Q91 983 aa12.03□□□□□ -0.48
ATP2B1-207ENST00000550716 NBPF3Q9H094 633 aa12.03□□□□□ -0.48
ATP2B1-207ENST00000550716 ATG3Q9NT62 314 aa12.03□□□□□ -0.48
ATP2B1-207ENST00000550716 TMOD3Q9NYL9 352 aa12.03□□□□□ -0.48
ATP2B1-207ENST00000550716 CD2APQ9Y5K6 639 aa12.03□□□□□ -0.48
ATP2B1-207ENST00000550716 TRIM6-TRIM34B2RNG4 842 aa12.02□□□□□ -0.49
ATP2B1-207ENST00000550716 GNPATO15228 680 aa12.02□□□□□ -0.49
ATP2B1-207ENST00000550716 GRIN3BO60391 1043 aa12.02□□□□□ -0.49
ATP2B1-207ENST00000550716 ZEB1P37275 1124 aaPredicted RBP12.02□□□□□ -0.49
ATP2B1-207ENST00000550716 RABGEF1Q9UJ41 708 aa12.02□□□□□ -0.49
ATP2B1-207ENST00000550716 IGSF1Q8N6C5 1336 aa12.02□□□□□ -0.49
ATP2B1-207ENST00000550716 ADCY9O60503 1353 aa12.02□□□□□ -0.49
ATP2B1-207ENST00000550716 BHMG1C9JSJ3 638 aaPredicted RBP12.01□□□□□ -0.49
ATP2B1-207ENST00000550716 SSFA2P28290 1259 aa12.01□□□□□ -0.49
ATP2B1-207ENST00000550716 IFNL2Q8IZJ0 200 aa12.01□□□□□ -0.49
ATP2B1-207ENST00000550716 MRPL50Q8N5N7 158 aaKnown RBP12.01□□□□□ -0.49
ATP2B1-207ENST00000550716 KDM6AO15550 1401 aaPredicted RBP12.01□□□□□ -0.49
ATP2B1-207ENST00000550716 HSPA5P11021 654 aaKnown RBP12□□□□□ -0.49
ATP2B1-207ENST00000550716 ATP6V1AP38606 617 aa12□□□□□ -0.49
ATP2B1-207ENST00000550716 AEBP1Q8IUX7 1158 aa12□□□□□ -0.49
ATP2B1-207ENST00000550716 TIMELESSQ9UNS1 1208 aa12□□□□□ -0.49
ATP2B1-207ENST00000550716 PANK3Q9H999 370 aa11.99□□□□□ -0.49
ATP2B1-207ENST00000550716 KIAA1468Q9P260 1216 aa11.99□□□□□ -0.49
ATP2B1-207ENST00000550716 PXDNLA1KZ92 1463 aa11.98□□□□□ -0.49
ATP2B1-207ENST00000550716 PRSS12P56730 875 aa11.98□□□□□ -0.49
ATP2B1-207ENST00000550716 ZNF526Q8TF50 670 aaPredicted RBP11.98□□□□□ -0.49
ATP2B1-207ENST00000550716 CDCA7LQ96GN5 454 aa11.98□□□□□ -0.49
ATP2B1-207ENST00000550716 TSKSQ9UJT2 592 aa11.98□□□□□ -0.49
ATP2B1-207ENST00000550716 MMP10P09238 476 aa11.97□□□□□ -0.49
ATP2B1-207ENST00000550716 SMYD5Q6GMV2 418 aa11.97□□□□□ -0.49
ATP2B1-207ENST00000550716 KCTD12Q96CX2 325 aaKnown RBP11.97□□□□□ -0.49
ATP2B1-207ENST00000550716 KIAA1551Q9HCM1 1747 aa11.97□□□□□ -0.49
ATP2B1-207ENST00000550716 CICQ96RK0 1608 aaPredicted RBP11.97□□□□□ -0.49
ATP2B1-207ENST00000550716 GOLGA8CPA6NN73 597 aa11.96□□□□□ -0.49
ATP2B1-207ENST00000550716 ZNF530Q6P9A1 599 aaPredicted RBP11.96□□□□□ -0.49
ATP2B1-207ENST00000550716 SEPT9Q9UHD8 586 aaPredicted RBP11.96□□□□□ -0.49
ATP2B1-207ENST00000550716 C10orf71Q711Q0 1435 aa11.95□□□□□ -0.5
ATP2B1-207ENST00000550716 PLEKHG2Q9H7P9 1386 aa11.95□□□□□ -0.5
ATP2B1-207ENST00000550716 ERVV-2B6SEH9 535 aa11.95□□□□□ -0.5
ATP2B1-207ENST00000550716 EIF4G2P78344 907 aaKnown RBP eCLIP11.95□□□□□ -0.5
ATP2B1-207ENST00000550716 NPDC1Q9NQX5 325 aaPredicted RBP11.95□□□□□ -0.5
ATP2B1-207ENST00000550716 GYS1P13807 737 aa11.94□□□□□ -0.5
ATP2B1-207ENST00000550716 HMGB2P26583 209 aaKnown RBP11.94□□□□□ -0.5
ATP2B1-207ENST00000550716 RBM26Q5T8P6 1007 aaKnown RBP11.94□□□□□ -0.5
ATP2B1-207ENST00000550716 DCAF5Q96JK2 942 aa11.94□□□□□ -0.5
ATP2B1-207ENST00000550716 GPBP1L1Q9HC44 474 aaPredicted RBP11.94□□□□□ -0.5
ATP2B1-207ENST00000550716 FAM198AQ9UFP1 575 aa11.94□□□□□ -0.5
ATP2B1-207ENST00000550716 COL5A3P25940 1745 aaPredicted RBP11.94□□□□□ -0.5
ATP2B1-207ENST00000550716 CNTNAP4Q9C0A0 1308 aa11.93□□□□□ -0.5
ATP2B1-207ENST00000550716 PTCD1O75127 700 aaKnown RBP11.93□□□□□ -0.5
ATP2B1-207ENST00000550716 PLEKHO1Q53GL0 409 aaPredicted RBP11.93□□□□□ -0.5
ATP2B1-207ENST00000550716 TRAPPC3LQ5T215 181 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms