RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 COPS6Q7L5N1 327 aa17.75■□□□□ 0.43
TROAP-213ENST00000550709 LRP10Q7Z4F1 713 aa17.75■□□□□ 0.43
TROAP-213ENST00000550709 MYH16Q9H6N6 1097 aa17.75■□□□□ 0.43
TROAP-213ENST00000550709 DBF4Q9UBU7 674 aaPredicted RBP17.75■□□□□ 0.43
TROAP-213ENST00000550709 ZNF521Q96K83 1311 aa17.74■□□□□ 0.43
TROAP-213ENST00000550709 EXOSC9Q06265 439 aaKnown RBP17.74■□□□□ 0.43
TROAP-213ENST00000550709 TWISTNBQ3B726 338 aaPredicted RBP17.74■□□□□ 0.43
TROAP-213ENST00000550709 SETDB2Q96T68 719 aa17.74■□□□□ 0.43
TROAP-213ENST00000550709 WWC3Q9ULE0 1092 aa17.74■□□□□ 0.43
TROAP-213ENST00000550709 MAP3K15Q6ZN16 1313 aa17.73■□□□□ 0.43
TROAP-213ENST00000550709 FAM177BA6PVY3 158 aa17.73■□□□□ 0.43
TROAP-213ENST00000550709 CLEC4GQ6UXB4 293 aa17.73■□□□□ 0.43
TROAP-213ENST00000550709 PELP1Q8IZL8 1130 aaKnown RBP17.73■□□□□ 0.43
TROAP-213ENST00000550709 C4AP0C0L4 1744 aa17.72■□□□□ 0.43
TROAP-213ENST00000550709 ERVV-1B6SEH8 477 aa17.72■□□□□ 0.43
TROAP-213ENST00000550709 NPHP1O15259 732 aa17.72■□□□□ 0.43
TROAP-213ENST00000550709 CCDC30Q5VVM6 783 aa17.72■□□□□ 0.43
TROAP-213ENST00000550709 CCDC24Q8N4L8 307 aa17.72■□□□□ 0.43
TROAP-213ENST00000550709 NIP7Q9Y221 180 aaKnown RBP eCLIP17.72■□□□□ 0.43
TROAP-213ENST00000550709 GPTP24298 496 aa17.71■□□□□ 0.43
TROAP-213ENST00000550709 CDCA7LQ96GN5 454 aa17.71■□□□□ 0.43
TROAP-213ENST00000550709 HYPKQ9NX55 129 aa17.71■□□□□ 0.43
TROAP-213ENST00000550709 A0A0G2JLW4 131 aa17.7■□□□□ 0.42
TROAP-213ENST00000550709 DCAF8L1A6NGE4 600 aa17.7■□□□□ 0.42
TROAP-213ENST00000550709 NBPF5PQ86XG9 351 aaPredicted RBP17.7■□□□□ 0.42
TROAP-213ENST00000550709 CARMIL3Q8ND23 1372 aa17.69■□□□□ 0.42
TROAP-213ENST00000550709 E9PSI1 815 aa17.69■□□□□ 0.42
TROAP-213ENST00000550709 HNRNPUQ00839 825 aaKnown RBP eCLIP17.69■□□□□ 0.42
TROAP-213ENST00000550709 GPR162Q16538 588 aa17.69■□□□□ 0.42
TROAP-213ENST00000550709 STK31Q9BXU1 1019 aa17.69■□□□□ 0.42
TROAP-213ENST00000550709 CHMP4AQ9BY43 222 aa17.69■□□□□ 0.42
TROAP-213ENST00000550709 PHAXQ9H814 394 aaKnown RBP17.69■□□□□ 0.42
TROAP-213ENST00000550709 LAMB4A4D0S4 1761 aa17.68■□□□□ 0.42
TROAP-213ENST00000550709 VAMP4O75379 141 aa17.68■□□□□ 0.42
TROAP-213ENST00000550709 DPEP1P16444 411 aa17.68■□□□□ 0.42
TROAP-213ENST00000550709 COL24A1Q17RW2 1714 aa17.68■□□□□ 0.42
TROAP-213ENST00000550709 GIGYF2Q6Y7W6 1299 aaKnown RBP17.68■□□□□ 0.42
TROAP-213ENST00000550709 CNBD1Q8NA66 436 aa17.68■□□□□ 0.42
TROAP-213ENST00000550709 C10orf71Q711Q0 1435 aa17.67■□□□□ 0.42
TROAP-213ENST00000550709 RGL2O15211 777 aa17.67■□□□□ 0.42
TROAP-213ENST00000550709 SLFN5Q08AF3 891 aa17.67■□□□□ 0.42
TROAP-213ENST00000550709 PRR5LQ6MZQ0 368 aa17.67■□□□□ 0.42
TROAP-213ENST00000550709 ANKRD13DQ6ZTN6 518 aa17.67■□□□□ 0.42
TROAP-213ENST00000550709 ZNF428Q96B54 188 aa17.67■□□□□ 0.42
TROAP-213ENST00000550709 SLC4A2P04920 1241 aa17.66■□□□□ 0.42
TROAP-213ENST00000550709 GTF2E1P29083 439 aaPredicted RBP17.66■□□□□ 0.42
TROAP-213ENST00000550709 CHRNA5P30532 468 aa17.66■□□□□ 0.42
TROAP-213ENST00000550709 TGFB2P61812 414 aa17.66■□□□□ 0.42
TROAP-213ENST00000550709 PLBD2Q8NHP8 589 aa17.66■□□□□ 0.42
TROAP-213ENST00000550709 ST5P78524 1137 aa17.65■□□□□ 0.42
TROAP-213ENST00000550709 TPTE2Q6XPS3 522 aa17.65■□□□□ 0.42
TROAP-213ENST00000550709 RIC3Q7Z5B4 369 aa17.65■□□□□ 0.42
TROAP-213ENST00000550709 ZNF34Q8IZ26 560 aa17.65■□□□□ 0.42
TROAP-213ENST00000550709 TCIRG1Q13488 830 aa17.64■□□□□ 0.41
TROAP-213ENST00000550709 SUSD4Q5VX71 490 aa17.64■□□□□ 0.41
TROAP-213ENST00000550709 UBN2Q6ZU65 1347 aa17.64■□□□□ 0.41
TROAP-213ENST00000550709 ATP5J2-PTCD1G3V325 749 aa17.63■□□□□ 0.41
TROAP-213ENST00000550709 YBX3P16989 372 aaKnown RBP eCLIP17.63■□□□□ 0.417e-8■□□□□ 11.2
TROAP-213ENST00000550709 HSP90AB3PQ58FF7 597 aa17.63■□□□□ 0.41
TROAP-213ENST00000550709 G2E3Q7L622 706 aa17.63■□□□□ 0.41
TROAP-213ENST00000550709 NUTM1Q86Y26 1132 aa17.63■□□□□ 0.41
TROAP-213ENST00000550709 C2CD5Q86YS7 1000 aa17.63■□□□□ 0.41
TROAP-213ENST00000550709 BRIP1Q9BX63 1249 aa17.63■□□□□ 0.41
TROAP-213ENST00000550709 SCN7AQ01118 1682 aa17.63■□□□□ 0.41
TROAP-213ENST00000550709 ATP10DQ9P241 1426 aa17.63■□□□□ 0.41
TROAP-213ENST00000550709 PXDNLA1KZ92 1463 aa17.63■□□□□ 0.41
TROAP-213ENST00000550709 DDX58O95786 925 aaKnown RBP17.62■□□□□ 0.41
TROAP-213ENST00000550709 KCNA3P22001 575 aa17.62■□□□□ 0.41
TROAP-213ENST00000550709 GOLGB1Q14789 3259 aaKnown RBP17.61■□□□□ 0.41
TROAP-213ENST00000550709 H0YIN7 160 aa17.61■□□□□ 0.41
TROAP-213ENST00000550709 ERFEQ4G0M1 354 aa17.61■□□□□ 0.41
TROAP-213ENST00000550709 PARP10Q53GL7 1025 aa17.61■□□□□ 0.41
TROAP-213ENST00000550709 NLRP10Q86W26 655 aa17.61■□□□□ 0.41
TROAP-213ENST00000550709 NYXQ9GZU5 481 aa17.61■□□□□ 0.41
TROAP-213ENST00000550709 BCS1LQ9Y276 419 aa17.61■□□□□ 0.41
TROAP-213ENST00000550709 PDE6BP35913 854 aa17.6■□□□□ 0.41
TROAP-213ENST00000550709 PPP1R42Q7Z4L9 355 aa17.6■□□□□ 0.41
TROAP-213ENST00000550709 TRMT2AQ8IZ69 625 aaKnown RBP17.6■□□□□ 0.41
TROAP-213ENST00000550709 MYD88Q99836 296 aa17.6■□□□□ 0.41
TROAP-213ENST00000550709 UTP14AQ9BVJ6 771 aaKnown RBP17.6■□□□□ 0.41
TROAP-213ENST00000550709 PIM2Q9P1W9 311 aa17.6■□□□□ 0.41
TROAP-213ENST00000550709 MAP3K2Q9Y2U5 619 aa17.6■□□□□ 0.41
TROAP-213ENST00000550709 PI4KAP2A4QPH2 592 aa17.59■□□□□ 0.41
TROAP-213ENST00000550709 NTSR2O95665 410 aa17.59■□□□□ 0.41
TROAP-213ENST00000550709 FLIIQ13045 1269 aa17.59■□□□□ 0.41
TROAP-213ENST00000550709 PI4KAP1Q8N8J0 262 aa17.59■□□□□ 0.41
TROAP-213ENST00000550709 ZNF622Q969S3 477 aaKnown RBP eCLIP17.59■□□□□ 0.41
TROAP-213ENST00000550709 FKBP5Q13451 457 aaPredicted RBP17.58■□□□□ 0.4
TROAP-213ENST00000550709 DALRD3Q5D0E6 543 aaKnown RBP17.58■□□□□ 0.4
TROAP-213ENST00000550709 KSR2Q6VAB6 950 aa17.58■□□□□ 0.4
TROAP-213ENST00000550709 SYNE4Q8N205 404 aa17.58■□□□□ 0.4
TROAP-213ENST00000550709 ISCA1Q9BUE6 129 aa17.58■□□□□ 0.4
TROAP-213ENST00000550709 TRMT112Q9UI30 125 aaKnown RBP17.58■□□□□ 0.4
TROAP-213ENST00000550709 ABCC12Q96J65 1359 aa17.57■□□□□ 0.4
TROAP-213ENST00000550709 RTL5Q5HYW3 569 aaPredicted RBP17.57■□□□□ 0.4
TROAP-213ENST00000550709 METTL22Q9BUU2 404 aaPredicted RBP17.57■□□□□ 0.4
TROAP-213ENST00000550709 BCORQ6W2J9 1755 aa17.57■□□□□ 0.4
TROAP-213ENST00000550709 GRIN3BO60391 1043 aa17.56■□□□□ 0.4
TROAP-213ENST00000550709 BCL2L13Q9BXK5 485 aa17.56■□□□□ 0.4
TROAP-213ENST00000550709 ADCY9O60503 1353 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms