RNA–Protein interactions for RNA: ENST00000550647.5

RAB3IP-213, Transcript of RAB3A interacting protein, humanhuman

TSL 3

Gene RAB3IP, Length 742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-213ENST00000550647 ITPKCQ96DU7 683 aa8.16□□□□□ -1.1
RAB3IP-213ENST00000550647 FRMD6Q96NE9 622 aa8.16□□□□□ -1.1
RAB3IP-213ENST00000550647 DUSP9Q99956 384 aaKnown RBP8.16□□□□□ -1.1
RAB3IP-213ENST00000550647 GRIP2Q9C0E4 1043 aa8.16□□□□□ -1.1
RAB3IP-213ENST00000550647 FAM13BQ9NYF5 915 aa8.16□□□□□ -1.1
RAB3IP-213ENST00000550647 ZNF232Q9UNY5 417 aa8.16□□□□□ -1.1
RAB3IP-213ENST00000550647 V9GY48 417 aaPredicted RBP8.16□□□□□ -1.1
RAB3IP-213ENST00000550647 SORBS3O60504 671 aa8.15□□□□□ -1.1
RAB3IP-213ENST00000550647 ZIC2O95409 532 aaPredicted RBP8.15□□□□□ -1.1
RAB3IP-213ENST00000550647 TIMP2P16035 220 aa8.15□□□□□ -1.1
RAB3IP-213ENST00000550647 IER5Q5VY09 327 aa8.15□□□□□ -1.1
RAB3IP-213ENST00000550647 EDEM1Q92611 657 aa8.15□□□□□ -1.1
RAB3IP-213ENST00000550647 NGLY1Q96IV0 654 aa8.15□□□□□ -1.1
RAB3IP-213ENST00000550647 ZDHHC3Q9NYG2 299 aa8.15□□□□□ -1.1
RAB3IP-213ENST00000550647 HCN4Q9Y3Q4 1203 aa8.15□□□□□ -1.1
RAB3IP-213ENST00000550647 NEFLP07196 543 aa8.14□□□□□ -1.11
RAB3IP-213ENST00000550647 ZNF697Q5TEC3 545 aa8.14□□□□□ -1.11
RAB3IP-213ENST00000550647 METTL16Q86W50 562 aaKnown RBP8.14□□□□□ -1.11
RAB3IP-213ENST00000550647 DRC1Q96MC2 740 aa8.14□□□□□ -1.11
RAB3IP-213ENST00000550647 NIF3L1Q9GZT8 377 aa8.14□□□□□ -1.11
RAB3IP-213ENST00000550647 DNAJC25Q9H1X3 360 aa8.14□□□□□ -1.11
RAB3IP-213ENST00000550647 KLK14Q9P0G3 267 aa8.14□□□□□ -1.11
RAB3IP-213ENST00000550647 SPATA31C2B4DYI2 1134 aa8.13□□□□□ -1.11
RAB3IP-213ENST00000550647 TGFBR3LH3BV60 316 aa8.13□□□□□ -1.11
RAB3IP-213ENST00000550647 MEN1O00255 615 aa8.13□□□□□ -1.11
RAB3IP-213ENST00000550647 PCSK2P16519 638 aa8.13□□□□□ -1.11
RAB3IP-213ENST00000550647 GNA15P30679 374 aa8.13□□□□□ -1.11
RAB3IP-213ENST00000550647 RNF144AP50876 292 aaPredicted RBP8.13□□□□□ -1.11
RAB3IP-213ENST00000550647 TREML1Q86YW5 311 aa8.13□□□□□ -1.11
RAB3IP-213ENST00000550647 MEIOBQ8N635 442 aa8.13□□□□□ -1.11
RAB3IP-213ENST00000550647 CSRNP1Q96S65 589 aa8.13□□□□□ -1.11
RAB3IP-213ENST00000550647 CFHR5Q9BXR6 569 aa8.13□□□□□ -1.11
RAB3IP-213ENST00000550647 IRX2Q9BZI1 471 aaPredicted RBP8.13□□□□□ -1.11
RAB3IP-213ENST00000550647 MRS2Q9HD23 443 aa8.13□□□□□ -1.11
RAB3IP-213ENST00000550647 WWC3Q9ULE0 1092 aa8.13□□□□□ -1.11
RAB3IP-213ENST00000550647 BCS1LQ9Y276 419 aa8.13□□□□□ -1.11
RAB3IP-213ENST00000550647 PNMA6FA0A0J9YX94 578 aa8.12□□□□□ -1.11
RAB3IP-213ENST00000550647 ERCC5P28715 1186 aaPredicted RBP8.12□□□□□ -1.11
RAB3IP-213ENST00000550647 GTF2E1P29083 439 aaPredicted RBP8.12□□□□□ -1.11
RAB3IP-213ENST00000550647 WDR4P57081 412 aaKnown RBP8.12□□□□□ -1.11
RAB3IP-213ENST00000550647 DNM1Q05193 864 aaKnown RBP8.12□□□□□ -1.11
RAB3IP-213ENST00000550647 RAD51AP2Q09MP3 1159 aa8.12□□□□□ -1.11
RAB3IP-213ENST00000550647 PSMD2Q13200 908 aa8.12□□□□□ -1.11
RAB3IP-213ENST00000550647 SF3A1Q15459 793 aaKnown RBP8.12□□□□□ -1.11
RAB3IP-213ENST00000550647 NAALADL2Q58DX5 795 aa8.12□□□□□ -1.11
RAB3IP-213ENST00000550647 TMEM214Q6NUQ4 689 aaKnown RBP8.12□□□□□ -1.11
RAB3IP-213ENST00000550647 ZFAND3Q9H8U3 227 aa8.12□□□□□ -1.11
RAB3IP-213ENST00000550647 FANCCQ00597 558 aa8.11□□□□□ -1.11
RAB3IP-213ENST00000550647 GNASQ5JWF2 1037 aa8.11□□□□□ -1.11
RAB3IP-213ENST00000550647 XKR5Q6UX68 686 aa8.11□□□□□ -1.11
RAB3IP-213ENST00000550647 AGBL1Q96MI9 1066 aa8.11□□□□□ -1.11
RAB3IP-213ENST00000550647 DMGDHQ9UI17 866 aaKnown RBP8.11□□□□□ -1.11
RAB3IP-213ENST00000550647 GDF9O60383 454 aa8.1□□□□□ -1.11
RAB3IP-213ENST00000550647 TXLNAP40222 546 aa8.1□□□□□ -1.11
RAB3IP-213ENST00000550647 RELBQ01201 579 aa8.1□□□□□ -1.11
RAB3IP-213ENST00000550647 LAPTM4AQ15012 233 aa8.1□□□□□ -1.11
RAB3IP-213ENST00000550647 WDR44Q5JSH3 913 aa8.1□□□□□ -1.11
RAB3IP-213ENST00000550647 TMEM87AQ8NBN3 555 aa8.1□□□□□ -1.11
RAB3IP-213ENST00000550647 FAM161BQ96MY7 647 aa8.1□□□□□ -1.11
RAB3IP-213ENST00000550647 TOR4AQ9NXH8 423 aa8.1□□□□□ -1.11
RAB3IP-213ENST00000550647 PARP3Q9Y6F1 533 aa8.1□□□□□ -1.11
RAB3IP-213ENST00000550647 SPINT1O43278 529 aa8.09□□□□□ -1.11
RAB3IP-213ENST00000550647 NBPF1Q3BBV0 1214 aa8.09□□□□□ -1.11
RAB3IP-213ENST00000550647 C4orf17Q53FE4 359 aa8.09□□□□□ -1.11
RAB3IP-213ENST00000550647 PIK3R5Q8WYR1 880 aa8.09□□□□□ -1.11
RAB3IP-213ENST00000550647 NUDT16Q96DE0 195 aaKnown RBP8.09□□□□□ -1.11
RAB3IP-213ENST00000550647 CRELD1Q96HD1 420 aa8.09□□□□□ -1.11
RAB3IP-213ENST00000550647 SETDB2Q96T68 719 aa8.09□□□□□ -1.11
RAB3IP-213ENST00000550647 TSEN34Q9BSV6 310 aaKnown RBP8.09□□□□□ -1.11
RAB3IP-213ENST00000550647 TGIF2Q9GZN2 237 aa8.09□□□□□ -1.11
RAB3IP-213ENST00000550647 GGNBP2Q9H3C7 697 aa8.09□□□□□ -1.11
RAB3IP-213ENST00000550647 RNF19AQ9NV58 838 aa8.09□□□□□ -1.11
RAB3IP-213ENST00000550647 VTI1BQ9UEU0 232 aa8.09□□□□□ -1.11
RAB3IP-213ENST00000550647 AK5Q9Y6K8 562 aa8.09□□□□□ -1.11
RAB3IP-213ENST00000550647 EIF1AYO14602 144 aaKnown RBP8.08□□□□□ -1.12
RAB3IP-213ENST00000550647 MICAL2O94851 1124 aa8.08□□□□□ -1.12
RAB3IP-213ENST00000550647 RHPN1Q8TCX5 695 aa8.08□□□□□ -1.12
RAB3IP-213ENST00000550647 GPR152Q8TDT2 470 aa8.08□□□□□ -1.12
RAB3IP-213ENST00000550647 UBXN4Q92575 508 aa8.08□□□□□ -1.12
RAB3IP-213ENST00000550647 RNF34Q969K3 372 aa8.08□□□□□ -1.12
RAB3IP-213ENST00000550647 ZNF395Q9H8N7 513 aaPredicted RBP8.08□□□□□ -1.12
RAB3IP-213ENST00000550647 J3QL48 77 aa8.07□□□□□ -1.12
RAB3IP-213ENST00000550647 OPLAHO14841 1288 aa8.07□□□□□ -1.12
RAB3IP-213ENST00000550647 GIPC1O14908 333 aa8.07□□□□□ -1.12
RAB3IP-213ENST00000550647 SMPD1P17405 629 aa8.07□□□□□ -1.12
RAB3IP-213ENST00000550647 PLA2G4AP47712 749 aa8.07□□□□□ -1.12
RAB3IP-213ENST00000550647 PRR20EP86478 221 aa8.07□□□□□ -1.12
RAB3IP-213ENST00000550647 PRR20CP86479 221 aa8.07□□□□□ -1.12
RAB3IP-213ENST00000550647 PRR20DP86480 221 aa8.07□□□□□ -1.12
RAB3IP-213ENST00000550647 PRR20BP86481 221 aa8.07□□□□□ -1.12
RAB3IP-213ENST00000550647 PRR20AP86496 221 aa8.07□□□□□ -1.12
RAB3IP-213ENST00000550647 FOXC1Q12948 553 aa8.07□□□□□ -1.12
RAB3IP-213ENST00000550647 ORC1Q13415 861 aa8.07□□□□□ -1.12
RAB3IP-213ENST00000550647 NT5DC4Q86YG4 428 aa8.07□□□□□ -1.12
RAB3IP-213ENST00000550647 SLC43A3Q8NBI5 491 aa8.07□□□□□ -1.12
RAB3IP-213ENST00000550647 ANKIB1Q9P2G1 1089 aa8.07□□□□□ -1.12
RAB3IP-213ENST00000550647 CPNE3O75131 537 aaKnown RBP8.06□□□□□ -1.12
RAB3IP-213ENST00000550647 ZNF76P36508 570 aa8.06□□□□□ -1.12
RAB3IP-213ENST00000550647 SLC27A3Q5K4L6 730 aa8.06□□□□□ -1.12
RAB3IP-213ENST00000550647 NBPF10Q6P3W6 841 aaKnown RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms