RNA–Protein interactions for RNA: ENST00000550582.2

NR4A1-216, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 5

Gene NR4A1, Length 607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-216ENST00000550582 NPM2Q86SE8 214 aaKnown RBP19.46■□□□□ 0.71
NR4A1-216ENST00000550582 FMNL2Q96PY5 1086 aa19.46■□□□□ 0.71
NR4A1-216ENST00000550582 PIP4K2AP48426 406 aaPredicted RBP19.45■□□□□ 0.7
NR4A1-216ENST00000550582 ST5P78524 1137 aa19.45■□□□□ 0.7
NR4A1-216ENST00000550582 GAS2L2Q8NHY3 880 aa19.45■□□□□ 0.7
NR4A1-216ENST00000550582 MASTLQ96GX5 879 aa19.45■□□□□ 0.7
NR4A1-216ENST00000550582 SIPA1L3O60292 1781 aaPredicted RBP19.44■□□□□ 0.7
NR4A1-216ENST00000550582 CACNA1SQ13698 1873 aa19.44■□□□□ 0.7
NR4A1-216ENST00000550582 COL3A1P02461 1466 aaPredicted RBP19.44■□□□□ 0.7
NR4A1-216ENST00000550582 DZIP3Q86Y13 1208 aaKnown RBP19.44■□□□□ 0.7
NR4A1-216ENST00000550582 BTBD11A6QL63 1104 aa19.42■□□□□ 0.7
NR4A1-216ENST00000550582 SOGA3Q5TF21 947 aa19.42■□□□□ 0.7
NR4A1-216ENST00000550582 USP16Q9Y5T5 823 aa19.42■□□□□ 0.7
NR4A1-216ENST00000550582 PRAMEF22A3QJZ6 481 aa19.41■□□□□ 0.7
NR4A1-216ENST00000550582 C7orf43Q8WVR3 580 aa19.41■□□□□ 0.7
NR4A1-216ENST00000550582 PHACTR3Q96KR7 559 aa19.41■□□□□ 0.7
NR4A1-216ENST00000550582 IQCA1LA6NCM1 817 aa19.4■□□□□ 0.7
NR4A1-216ENST00000550582 FOXN1O15353 648 aa19.4■□□□□ 0.7
NR4A1-216ENST00000550582 LDHDQ86WU2 507 aa19.4■□□□□ 0.7
NR4A1-216ENST00000550582 NBPF5PQ86XG9 351 aaPredicted RBP19.4■□□□□ 0.7
NR4A1-216ENST00000550582 TAF1DQ9H5J8 278 aaPredicted RBP19.4■□□□□ 0.7
NR4A1-216ENST00000550582 PASKQ96RG2 1323 aa19.4■□□□□ 0.7
NR4A1-216ENST00000550582 CNTNAP1P78357 1384 aa19.4■□□□□ 0.7
NR4A1-216ENST00000550582 CEMIPQ8WUJ3 1361 aa19.4■□□□□ 0.7
NR4A1-216ENST00000550582 BCORQ6W2J9 1755 aa19.39■□□□□ 0.7
NR4A1-216ENST00000550582 OLFM4Q6UX06 510 aa19.39■□□□□ 0.69
NR4A1-216ENST00000550582 L3MBTL3Q96JM7 780 aaPredicted RBP19.39■□□□□ 0.69
NR4A1-216ENST00000550582 ARFGEF2Q9Y6D5 1785 aa19.39■□□□□ 0.69
NR4A1-216ENST00000550582 CCDC93Q567U6 631 aa19.38■□□□□ 0.69
NR4A1-216ENST00000550582 EAPPQ56P03 285 aaPredicted RBP19.38■□□□□ 0.69
NR4A1-216ENST00000550582 CCER1Q8TC90 406 aaPredicted RBP19.38■□□□□ 0.69
NR4A1-216ENST00000550582 ZNF277Q9NRM2 450 aaPredicted RBP19.38■□□□□ 0.69
NR4A1-216ENST00000550582 ZNF541Q9H0D2 1346 aa19.37■□□□□ 0.69
NR4A1-216ENST00000550582 ITGBL1O95965 494 aaPredicted RBP19.37■□□□□ 0.69
NR4A1-216ENST00000550582 NPR1P16066 1061 aa19.37■□□□□ 0.69
NR4A1-216ENST00000550582 CLEC4GQ6UXB4 293 aa19.37■□□□□ 0.69
NR4A1-216ENST00000550582 FAM177BA6PVY3 158 aa19.36■□□□□ 0.69
NR4A1-216ENST00000550582 PRKAR2BP31323 418 aa19.36■□□□□ 0.69
NR4A1-216ENST00000550582 VEGFBP49765 207 aa19.36■□□□□ 0.69
NR4A1-216ENST00000550582 FKBP4Q02790 459 aaKnown RBP eCLIP19.36■□□□□ 0.69
NR4A1-216ENST00000550582 CLEC11AQ9Y240 323 aa19.36■□□□□ 0.69
NR4A1-216ENST00000550582 SCN4AP35499 1836 aa19.35■□□□□ 0.69
NR4A1-216ENST00000550582 KLRG2A4D1S0 409 aaPredicted RBP19.35■□□□□ 0.69
NR4A1-216ENST00000550582 TMEM88BA6NKF7 163 aa19.35■□□□□ 0.69
NR4A1-216ENST00000550582 RSPH6AQ9H0K4 717 aa19.35■□□□□ 0.69
NR4A1-216ENST00000550582 ZNF652Q9Y2D9 606 aa19.35■□□□□ 0.69
NR4A1-216ENST00000550582 TPTE2Q6XPS3 522 aa19.34■□□□□ 0.69
NR4A1-216ENST00000550582 MCM10Q7L590 875 aa19.34■□□□□ 0.69
NR4A1-216ENST00000550582 HACL1Q9UJ83 578 aa19.34■□□□□ 0.69
NR4A1-216ENST00000550582 NIP7Q9Y221 180 aaKnown RBP eCLIP19.34■□□□□ 0.69
NR4A1-216ENST00000550582 NBPF26B4DH59 902 aa19.33■□□□□ 0.68
NR4A1-216ENST00000550582 SNRPA1P09661 255 aaKnown RBP19.33■□□□□ 0.68
NR4A1-216ENST00000550582 EPHX2P34913 555 aa19.33■□□□□ 0.68
NR4A1-216ENST00000550582 NBPF10Q6P3W6 841 aaKnown RBP19.33■□□□□ 0.68
NR4A1-216ENST00000550582 NBPF15Q8N660 670 aa19.33■□□□□ 0.68
NR4A1-216ENST00000550582 AIDAQ96BJ3 306 aa19.33■□□□□ 0.68
NR4A1-216ENST00000550582 PRDM10Q9NQV6 1147 aa19.33■□□□□ 0.68
NR4A1-216ENST00000550582 NPC1L1Q9UHC9 1359 aa19.32■□□□□ 0.68
NR4A1-216ENST00000550582 CTCFP49711 727 aaPredicted RBP19.32■□□□□ 0.68
NR4A1-216ENST00000550582 RNF123Q5XPI4 1314 aa19.31■□□□□ 0.68
NR4A1-216ENST00000550582 MAP1SQ66K74 1059 aaPredicted RBP19.31■□□□□ 0.68
NR4A1-216ENST00000550582 RTKN2Q8IZC4 609 aa19.31■□□□□ 0.68
NR4A1-216ENST00000550582 SYNE4Q8N205 404 aa19.31■□□□□ 0.68
NR4A1-216ENST00000550582 FZD9O00144 591 aa19.3■□□□□ 0.68
NR4A1-216ENST00000550582 IARSP41252 1262 aaKnown RBP19.3■□□□□ 0.68
NR4A1-216ENST00000550582 DCTN1Q14203 1278 aa19.3■□□□□ 0.68
NR4A1-216ENST00000550582 HLFQ16534 295 aa19.3■□□□□ 0.68
NR4A1-216ENST00000550582 RTF1Q92541 710 aaKnown RBP19.3■□□□□ 0.68
NR4A1-216ENST00000550582 WBP1LQ9NX94 342 aa19.3■□□□□ 0.68
NR4A1-216ENST00000550582 ADAMTSL1Q8N6G6 1762 aa19.29■□□□□ 0.68
NR4A1-216ENST00000550582 ALDH1B1P30837 517 aa19.29■□□□□ 0.68
NR4A1-216ENST00000550582 LBX1P52954 281 aa19.29■□□□□ 0.68
NR4A1-216ENST00000550582 CNTROBQ8N137 903 aa19.29■□□□□ 0.68
NR4A1-216ENST00000550582 GTF2E1P29083 439 aaPredicted RBP19.28■□□□□ 0.68
NR4A1-216ENST00000550582 DEFB115Q30KQ5 88 aa19.28■□□□□ 0.68
NR4A1-216ENST00000550582 PNMA8AQ86V59 439 aaPredicted RBP19.28■□□□□ 0.68
NR4A1-216ENST00000550582 CFAP53Q96M91 514 aa19.28■□□□□ 0.68
NR4A1-216ENST00000550582 U2AF1L5P0DN76 240 aaPredicted RBP19.27■□□□□ 0.68
NR4A1-216ENST00000550582 U2AF1Q01081 240 aaKnown RBP eCLIP19.27■□□□□ 0.68
NR4A1-216ENST00000550582 GPC2Q8N158 579 aa19.27■□□□□ 0.68
NR4A1-216ENST00000550582 RASSF10A6NK89 507 aa19.26■□□□□ 0.67
NR4A1-216ENST00000550582 RGL2O15211 777 aa19.26■□□□□ 0.67
NR4A1-216ENST00000550582 NUTM1Q86Y26 1132 aa19.26■□□□□ 0.67
NR4A1-216ENST00000550582 NGEFQ8N5V2 710 aa19.26■□□□□ 0.67
NR4A1-216ENST00000550582 MIS18AQ9NYP9 233 aa19.26■□□□□ 0.67
NR4A1-216ENST00000550582 NUDCQ9Y266 331 aa19.26■□□□□ 0.67
NR4A1-216ENST00000550582 GJA3Q9Y6H8 435 aa19.26■□□□□ 0.67
NR4A1-216ENST00000550582 JDP2Q8WYK2 163 aa19.25■□□□□ 0.67
NR4A1-216ENST00000550582 SNED1Q8TER0 1413 aa19.25■□□□□ 0.67
NR4A1-216ENST00000550582 WDR33Q9C0J8 1336 aaKnown RBP19.25■□□□□ 0.67
NR4A1-216ENST00000550582 ABCC12Q96J65 1359 aa19.24■□□□□ 0.67
NR4A1-216ENST00000550582 HSPA8P11142 646 aaKnown RBP19.24■□□□□ 0.67
NR4A1-216ENST00000550582 PSMD1Q99460 953 aa19.24■□□□□ 0.67
NR4A1-216ENST00000550582 ABT1Q9ULW3 272 aaKnown RBP19.24■□□□□ 0.67
NR4A1-216ENST00000550582 COL4A5P29400 1685 aa19.24■□□□□ 0.67
NR4A1-216ENST00000550582 FMR1Q06787 632 aaKnown RBP eCLIP19.23■□□□□ 0.67
NR4A1-216ENST00000550582 TAF7Q15545 349 aaPredicted RBP19.23■□□□□ 0.67
NR4A1-216ENST00000550582 CRY2Q49AN0 593 aa19.23■□□□□ 0.67
NR4A1-216ENST00000550582 DDX21Q9NR30 783 aaKnown RBP eCLIP19.23■□□□□ 0.67
NR4A1-216ENST00000550582 EIF6P56537 245 aaKnown RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms