RNA–Protein interactions for RNA: ENST00000550274.1

LETMD1-222, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 809 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-222ENST00000550274 PIP4K2AP48426 406 aaPredicted RBP16.89■□□□□ 0.29
LETMD1-222ENST00000550274 PRAMEF22A3QJZ6 481 aa16.88■□□□□ 0.29
LETMD1-222ENST00000550274 POTECB2RU33 542 aa16.88■□□□□ 0.29
LETMD1-222ENST00000550274 PDZRN3Q9UPQ7 1066 aa16.88■□□□□ 0.29
LETMD1-222ENST00000550274 USP16Q9Y5T5 823 aa16.88■□□□□ 0.29
LETMD1-222ENST00000550274 NUP98P52948 1817 aa16.87■□□□□ 0.29
LETMD1-222ENST00000550274 HOXD11P31277 338 aaPredicted RBP16.87■□□□□ 0.29
LETMD1-222ENST00000550274 DZIP3Q86Y13 1208 aaKnown RBP16.87■□□□□ 0.29
LETMD1-222ENST00000550274 CNBD1Q8NA66 436 aa16.87■□□□□ 0.29
LETMD1-222ENST00000550274 SETDB2Q96T68 719 aa16.87■□□□□ 0.29
LETMD1-222ENST00000550274 KDM3BQ7LBC6 1761 aa16.87■□□□□ 0.29
LETMD1-222ENST00000550274 CFAP53Q96M91 514 aa16.86■□□□□ 0.29
LETMD1-222ENST00000550274 SCN4AP35499 1836 aa16.85■□□□□ 0.29
LETMD1-222ENST00000550274 SRGNP10124 158 aa16.85■□□□□ 0.29
LETMD1-222ENST00000550274 ERFEQ4G0M1 354 aa16.85■□□□□ 0.29
LETMD1-222ENST00000550274 MCM10Q7L590 875 aa16.85■□□□□ 0.29
LETMD1-222ENST00000550274 NPM2Q86SE8 214 aaKnown RBP16.85■□□□□ 0.29
LETMD1-222ENST00000550274 NPHP1O15259 732 aa16.84■□□□□ 0.29
LETMD1-222ENST00000550274 ST5P78524 1137 aa16.84■□□□□ 0.29
LETMD1-222ENST00000550274 STYK1Q6J9G0 422 aa16.84■□□□□ 0.29
LETMD1-222ENST00000550274 PRPF40BQ6NWY9 871 aaKnown RBP16.84■□□□□ 0.29
LETMD1-222ENST00000550274 TAOK3Q9H2K8 898 aa16.84■□□□□ 0.29
LETMD1-222ENST00000550274 LTBP3Q9NS15 1303 aa16.84■□□□□ 0.29
LETMD1-222ENST00000550274 U2AF1L5P0DN76 240 aaPredicted RBP16.83■□□□□ 0.28
LETMD1-222ENST00000550274 PPP2R1AP30153 589 aa16.83■□□□□ 0.28
LETMD1-222ENST00000550274 U2AF1Q01081 240 aaKnown RBP eCLIP16.83■□□□□ 0.28
LETMD1-222ENST00000550274 DCTN1Q14203 1278 aa16.83■□□□□ 0.28
LETMD1-222ENST00000550274 COL13A1Q5TAT6 717 aaPredicted RBP16.83■□□□□ 0.28
LETMD1-222ENST00000550274 DPY19L2Q6NUT2 758 aa16.83■□□□□ 0.28
LETMD1-222ENST00000550274 CNKSR1Q969H4 720 aa16.83■□□□□ 0.28
LETMD1-222ENST00000550274 MASTLQ96GX5 879 aa16.82■□□□□ 0.28
LETMD1-222ENST00000550274 NUDCQ9Y266 331 aa16.82■□□□□ 0.28
LETMD1-222ENST00000550274 NBPF26B4DH59 902 aa16.81■□□□□ 0.28
LETMD1-222ENST00000550274 SNRPA1P09661 255 aaKnown RBP16.81■□□□□ 0.28
LETMD1-222ENST00000550274 NBPF10Q6P3W6 841 aaKnown RBP16.81■□□□□ 0.28
LETMD1-222ENST00000550274 NBPF5PQ86XG9 351 aaPredicted RBP16.81■□□□□ 0.28
LETMD1-222ENST00000550274 NBPF15Q8N660 670 aa16.81■□□□□ 0.28
LETMD1-222ENST00000550274 RTF1Q92541 710 aaKnown RBP16.81■□□□□ 0.28
LETMD1-222ENST00000550274 DDNO94850 711 aaPredicted RBP16.8■□□□□ 0.28
LETMD1-222ENST00000550274 CLEC4GQ6UXB4 293 aa16.8■□□□□ 0.28
LETMD1-222ENST00000550274 POTEIP0CG38 1075 aa16.79■□□□□ 0.28
LETMD1-222ENST00000550274 POTEJP0CG39 1038 aa16.79■□□□□ 0.28
LETMD1-222ENST00000550274 C7orf43Q8WVR3 580 aa16.79■□□□□ 0.28
LETMD1-222ENST00000550274 ZNF652Q9Y2D9 606 aa16.79■□□□□ 0.28
LETMD1-222ENST00000550274 SOGA3Q5TF21 947 aa16.78■□□□□ 0.28
LETMD1-222ENST00000550274 ADAMTSL1Q8N6G6 1762 aa16.77■□□□□ 0.28
LETMD1-222ENST00000550274 KLRG2A4D1S0 409 aaPredicted RBP16.77■□□□□ 0.28
LETMD1-222ENST00000550274 OLFM4Q6UX06 510 aa16.77■□□□□ 0.28
LETMD1-222ENST00000550274 MIS18AQ9NYP9 233 aa16.77■□□□□ 0.28
LETMD1-222ENST00000550274 NIP7Q9Y221 180 aaKnown RBP eCLIP16.77■□□□□ 0.28
LETMD1-222ENST00000550274 FAM177BA6PVY3 158 aa16.76■□□□□ 0.27
LETMD1-222ENST00000550274 HTATSF1O43719 755 aaKnown RBP16.76■□□□□ 0.27
LETMD1-222ENST00000550274 NPR1P16066 1061 aa16.76■□□□□ 0.27
LETMD1-222ENST00000550274 HLFQ16534 295 aa16.76■□□□□ 0.27
LETMD1-222ENST00000550274 CCDC93Q567U6 631 aa16.76■□□□□ 0.27
LETMD1-222ENST00000550274 CHADLQ6NUI6 762 aa16.76■□□□□ 0.27
LETMD1-222ENST00000550274 RGL2O15211 777 aa16.75■□□□□ 0.27
LETMD1-222ENST00000550274 HSPA1AP0DMV8 641 aaKnown RBP16.75■□□□□ 0.27
LETMD1-222ENST00000550274 HSPA1BP0DMV9 641 aaKnown RBP16.75■□□□□ 0.27
LETMD1-222ENST00000550274 TAF7Q15545 349 aaPredicted RBP16.75■□□□□ 0.27
LETMD1-222ENST00000550274 TPTE2Q6XPS3 522 aa16.75■□□□□ 0.27
LETMD1-222ENST00000550274 ABCC12Q96J65 1359 aa16.74■□□□□ 0.27
LETMD1-222ENST00000550274 ZNF541Q9H0D2 1346 aa16.73■□□□□ 0.27
LETMD1-222ENST00000550274 SNED1Q8TER0 1413 aa16.73■□□□□ 0.27
LETMD1-222ENST00000550274 FKBP4Q02790 459 aaKnown RBP eCLIP16.73■□□□□ 0.27
LETMD1-222ENST00000550274 L3MBTL3Q96JM7 780 aaPredicted RBP16.73■□□□□ 0.27
LETMD1-222ENST00000550274 ZNF277Q9NRM2 450 aaPredicted RBP16.73■□□□□ 0.27
LETMD1-222ENST00000550274 TNS4Q8IZW8 715 aa16.72■□□□□ 0.27
LETMD1-222ENST00000550274 TAF1DQ9H5J8 278 aaPredicted RBP16.72■□□□□ 0.27
LETMD1-222ENST00000550274 CREBZFQ9NS37 354 aa16.72■□□□□ 0.27
LETMD1-222ENST00000550274 COL4A5P29400 1685 aa16.72■□□□□ 0.27
LETMD1-222ENST00000550274 LAMB2P55268 1798 aa16.72■□□□□ 0.27
LETMD1-222ENST00000550274 ANKRD36CQ5JPF3 1778 aa16.72■□□□□ 0.27
LETMD1-222ENST00000550274 IQCA1LA6NCM1 817 aa16.71■□□□□ 0.27
LETMD1-222ENST00000550274 NGEFQ8N5V2 710 aa16.71■□□□□ 0.27
LETMD1-222ENST00000550274 MKRN1Q9UHC7 482 aaKnown RBP16.71■□□□□ 0.27
LETMD1-222ENST00000550274 PASKQ96RG2 1323 aa16.7■□□□□ 0.26
LETMD1-222ENST00000550274 LTBP1Q14766 1721 aa16.7■□□□□ 0.26
LETMD1-222ENST00000550274 CAPN15O75808 1086 aa16.7■□□□□ 0.26
LETMD1-222ENST00000550274 LDHDQ86WU2 507 aa16.7■□□□□ 0.26
LETMD1-222ENST00000550274 NUTM1Q86Y26 1132 aa16.7■□□□□ 0.26
LETMD1-222ENST00000550274 PLEKHF1Q96S99 279 aa16.7■□□□□ 0.26
LETMD1-222ENST00000550274 THUMPD2Q9BTF0 503 aaKnown RBP16.7■□□□□ 0.26
LETMD1-222ENST00000550274 GTF2E1P29083 439 aaPredicted RBP16.69■□□□□ 0.26
LETMD1-222ENST00000550274 EIF4A1P60842 406 aaKnown RBP16.69■□□□□ 0.26
LETMD1-222ENST00000550274 CRY2Q49AN0 593 aa16.69■□□□□ 0.26
LETMD1-222ENST00000550274 TTLL7Q6ZT98 887 aa16.69■□□□□ 0.26
LETMD1-222ENST00000550274 RTKN2Q8IZC4 609 aa16.69■□□□□ 0.26
LETMD1-222ENST00000550274 MAP3K15Q6ZN16 1313 aa16.69■□□□□ 0.26
LETMD1-222ENST00000550274 ALDH1B1P30837 517 aa16.68■□□□□ 0.26
LETMD1-222ENST00000550274 IARSP41252 1262 aaKnown RBP16.68■□□□□ 0.26
LETMD1-222ENST00000550274 SYNE4Q8N205 404 aa16.68■□□□□ 0.26
LETMD1-222ENST00000550274 RRP7AQ9Y3A4 280 aaKnown RBP16.68■□□□□ 0.26
LETMD1-222ENST00000550274 UBN2Q6ZU65 1347 aa16.68■□□□□ 0.26
LETMD1-222ENST00000550274 TRPM7Q96QT4 1865 aa16.67■□□□□ 0.26
LETMD1-222ENST00000550274 CNTNAP1P78357 1384 aa16.67■□□□□ 0.26
LETMD1-222ENST00000550274 ERVV-1B6SEH8 477 aa16.67■□□□□ 0.26
LETMD1-222ENST00000550274 MYL6BP14649 208 aa16.67■□□□□ 0.26
LETMD1-222ENST00000550274 EAPPQ56P03 285 aaPredicted RBP16.67■□□□□ 0.26
LETMD1-222ENST00000550274 SLC51AQ86UW1 340 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms