RNA–Protein interactions for RNA: ENST00000549770.1

NPAS3-207, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-207ENST00000549770 DDX10Q13206 875 aaKnown RBP8.57□□□□□ -1.04
NPAS3-207ENST00000549770 SMARCC1Q92922 1105 aaPredicted RBP8.57□□□□□ -1.04
NPAS3-207ENST00000549770 DCAF5Q96JK2 942 aa8.57□□□□□ -1.04
NPAS3-207ENST00000549770 EMILIN3Q9NT22 766 aa8.57□□□□□ -1.04
NPAS3-207ENST00000549770 SCN11AQ9UI33 1791 aa8.57□□□□□ -1.04
NPAS3-207ENST00000549770 C4BP0C0L5 1744 aa8.57□□□□□ -1.04
NPAS3-207ENST00000549770 QSER1Q2KHR3 1735 aa8.57□□□□□ -1.04
NPAS3-207ENST00000549770 ERVV-2B6SEH9 535 aa8.56□□□□□ -1.04
NPAS3-207ENST00000549770 HSP90AB1P08238 724 aaKnown RBP8.56□□□□□ -1.04
NPAS3-207ENST00000549770 PTGER2P43116 358 aa8.56□□□□□ -1.04
NPAS3-207ENST00000549770 MTHFSDQ2M296 383 aaKnown RBP8.56□□□□□ -1.04
NPAS3-207ENST00000549770 LINC00116Q8NCU8 138 aa8.56□□□□□ -1.04
NPAS3-207ENST00000549770 CFAP53Q96M91 514 aa8.56□□□□□ -1.04
NPAS3-207ENST00000549770 MTFR1LQ9H019 292 aa8.56□□□□□ -1.04
NPAS3-207ENST00000549770 LGR6Q9HBX8 967 aa8.56□□□□□ -1.04
NPAS3-207ENST00000549770 ATG3Q9NT62 314 aa8.56□□□□□ -1.04
NPAS3-207ENST00000549770 PLEKHG2Q9H7P9 1386 aa8.56□□□□□ -1.04
NPAS3-207ENST00000549770 UTRNP46939 3433 aa8.56□□□□□ -1.04
NPAS3-207ENST00000549770 LOC102724428A0A0B4J2F2 783 aa8.55□□□□□ -1.04
NPAS3-207ENST00000549770 EVI5O60447 810 aa8.55□□□□□ -1.04
NPAS3-207ENST00000549770 PHF14O94880 888 aa8.55□□□□□ -1.04
NPAS3-207ENST00000549770 ATP6V1AP38606 617 aa8.55□□□□□ -1.04
NPAS3-207ENST00000549770 SIK1P57059 783 aa8.55□□□□□ -1.04
NPAS3-207ENST00000549770 ITPK1Q13572 414 aa8.55□□□□□ -1.04
NPAS3-207ENST00000549770 AKAP4Q5JQC9 854 aa8.55□□□□□ -1.04
NPAS3-207ENST00000549770 MSL1Q68DK7 614 aa8.55□□□□□ -1.04
NPAS3-207ENST00000549770 AMIGO3Q86WK7 504 aa8.55□□□□□ -1.04
NPAS3-207ENST00000549770 COL23A1Q86Y22 540 aaPredicted RBP8.55□□□□□ -1.04
NPAS3-207ENST00000549770 NFATC2IPQ8NCF5 419 aa8.55□□□□□ -1.04
NPAS3-207ENST00000549770 WDR70Q9NW82 654 aa8.55□□□□□ -1.04
NPAS3-207ENST00000549770 UBR3Q6ZT12 1888 aa8.54□□□□□ -1.04
NPAS3-207ENST00000549770 PTCD1O75127 700 aaKnown RBP8.54□□□□□ -1.04
NPAS3-207ENST00000549770 U2AF1L5P0DN76 240 aaPredicted RBP8.54□□□□□ -1.04
NPAS3-207ENST00000549770 PRKAR2BP31323 418 aa8.54□□□□□ -1.04
NPAS3-207ENST00000549770 U2AF1Q01081 240 aaKnown RBP eCLIP8.54□□□□□ -1.04
NPAS3-207ENST00000549770 RNF166Q96A37 237 aaPredicted RBP8.54□□□□□ -1.04
NPAS3-207ENST00000549770 AK7Q96M32 723 aa8.54□□□□□ -1.04
NPAS3-207ENST00000549770 SLC4A9Q96Q91 983 aa8.54□□□□□ -1.04
NPAS3-207ENST00000549770 RNMTO43148 476 aaKnown RBP8.53□□□□□ -1.04
NPAS3-207ENST00000549770 PPP4R3BQ5MIZ7 849 aa8.53□□□□□ -1.04
NPAS3-207ENST00000549770 ERICH6BQ5W0A0 696 aa8.53□□□□□ -1.04
NPAS3-207ENST00000549770 PHACTR3Q96KR7 559 aa8.53□□□□□ -1.04
NPAS3-207ENST00000549770 RSPH6AQ9H0K4 717 aa8.53□□□□□ -1.04
NPAS3-207ENST00000549770 NUDCQ9Y266 331 aa8.53□□□□□ -1.04
NPAS3-207ENST00000549770 COL5A3P25940 1745 aaPredicted RBP8.52□□□□□ -1.05
NPAS3-207ENST00000549770 GNPATO15228 680 aa8.52□□□□□ -1.05
NPAS3-207ENST00000549770 SLC39A6Q13433 755 aa8.52□□□□□ -1.05
NPAS3-207ENST00000549770 CAMK2BQ13554 666 aa8.52□□□□□ -1.05
NPAS3-207ENST00000549770 ARXQ96QS3 562 aa8.52□□□□□ -1.05
NPAS3-207ENST00000549770 FHDC1Q9C0D6 1143 aaPredicted RBP8.52□□□□□ -1.05
NPAS3-207ENST00000549770 SLC52A2Q9HAB3 445 aa8.52□□□□□ -1.05
NPAS3-207ENST00000549770 TJP1Q07157 1748 aa8.51□□□□□ -1.05
NPAS3-207ENST00000549770 MAP3K5Q99683 1374 aa8.51□□□□□ -1.05
NPAS3-207ENST00000549770 ADAMTS7Q9UKP4 1686 aa8.51□□□□□ -1.05
NPAS3-207ENST00000549770 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.51□□□□□ -1.05
NPAS3-207ENST00000549770 POLD1P28340 1107 aa8.51□□□□□ -1.05
NPAS3-207ENST00000549770 ZNF454Q8N9F8 522 aa8.51□□□□□ -1.05
NPAS3-207ENST00000549770 SLC16A10Q8TF71 515 aa8.51□□□□□ -1.05
NPAS3-207ENST00000549770 COL24A1Q17RW2 1714 aa8.51□□□□□ -1.05
NPAS3-207ENST00000549770 MRC1P22897 1456 aa8.51□□□□□ -1.05
NPAS3-207ENST00000549770 MYH14Q7Z406 1995 aaKnown RBP8.5□□□□□ -1.05
NPAS3-207ENST00000549770 GNAT3A8MTJ3 354 aa8.5□□□□□ -1.05
NPAS3-207ENST00000549770 DPYSL4O14531 572 aa8.5□□□□□ -1.05
NPAS3-207ENST00000549770 PBX2P40425 430 aa8.5□□□□□ -1.05
NPAS3-207ENST00000549770 ANKRD13DQ6ZTN6 518 aa8.5□□□□□ -1.05
NPAS3-207ENST00000549770 IL17REQ8NFR9 667 aa8.5□□□□□ -1.05
NPAS3-207ENST00000549770 GAS2L2Q8NHY3 880 aa8.5□□□□□ -1.05
NPAS3-207ENST00000549770 SYT17Q9BSW7 474 aa8.5□□□□□ -1.05
NPAS3-207ENST00000549770 ZNF831Q5JPB2 1677 aa8.49□□□□□ -1.05
NPAS3-207ENST00000549770 SIPA1L3O60292 1781 aaPredicted RBP8.49□□□□□ -1.05
NPAS3-207ENST00000549770 SSFA2P28290 1259 aa8.49□□□□□ -1.05
NPAS3-207ENST00000549770 DCTN1Q14203 1278 aa8.49□□□□□ -1.05
NPAS3-207ENST00000549770 E2F4Q16254 413 aa8.49□□□□□ -1.05
NPAS3-207ENST00000549770 POTEEQ6S8J3 1075 aa8.49□□□□□ -1.05
NPAS3-207ENST00000549770 DNAJC10Q8IXB1 793 aa8.49□□□□□ -1.05
NPAS3-207ENST00000549770 FLAD1Q8NFF5 587 aa8.49□□□□□ -1.05
NPAS3-207ENST00000549770 KCPQ6ZWJ8 1503 aa8.49□□□□□ -1.05
NPAS3-207ENST00000549770 FCHSD2O94868 740 aa8.48□□□□□ -1.05
NPAS3-207ENST00000549770 CRKLP46109 303 aaKnown RBP8.48□□□□□ -1.05
NPAS3-207ENST00000549770 LSM11P83369 360 aaKnown RBP eCLIP8.48□□□□□ -1.05
NPAS3-207ENST00000549770 TEFQ10587 303 aa8.48□□□□□ -1.05
NPAS3-207ENST00000549770 RALBP1Q15311 655 aa8.48□□□□□ -1.05
NPAS3-207ENST00000549770 MCM10Q7L590 875 aa8.48□□□□□ -1.05
NPAS3-207ENST00000549770 NLGN2Q8NFZ4 835 aa8.48□□□□□ -1.05
NPAS3-207ENST00000549770 RTCBQ9Y3I0 505 aaKnown RBP8.48□□□□□ -1.05
NPAS3-207ENST00000549770 DLG5Q8TDM6 1919 aa8.48□□□□□ -1.05
NPAS3-207ENST00000549770 C4AP0C0L4 1744 aa8.48□□□□□ -1.05
NPAS3-207ENST00000549770 UBR2Q8IWV8 1755 aa8.48□□□□□ -1.05
NPAS3-207ENST00000549770 ARHGAP33O14559 1287 aa8.47□□□□□ -1.05
NPAS3-207ENST00000549770 KCNQ3O43525 872 aa8.47□□□□□ -1.05
NPAS3-207ENST00000549770 HMGB2P26583 209 aaKnown RBP8.47□□□□□ -1.05
NPAS3-207ENST00000549770 TRAPPC3LQ5T215 181 aa8.47□□□□□ -1.05
NPAS3-207ENST00000549770 RC3H1Q5TC82 1133 aaKnown RBP8.47□□□□□ -1.05
NPAS3-207ENST00000549770 TTC5Q8N0Z6 440 aa8.47□□□□□ -1.05
NPAS3-207ENST00000549770 ARHGEF1Q92888 912 aaKnown RBP8.47□□□□□ -1.05
NPAS3-207ENST00000549770 CNTNAP4Q9C0A0 1308 aa8.47□□□□□ -1.05
NPAS3-207ENST00000549770 CICQ96RK0 1608 aaPredicted RBP8.47□□□□□ -1.05
NPAS3-207ENST00000549770 RPS6KA4O75676 772 aa8.46□□□□□ -1.06
NPAS3-207ENST00000549770 PSEN2P49810 448 aa8.46□□□□□ -1.06
NPAS3-207ENST00000549770 FOSBP53539 338 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms