RNA–Protein interactions for RNA: ENST00000549752.1

CCDC38-207, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 476 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-207ENST00000549752 CARMIL3Q8ND23 1372 aa13.72□□□□□ -0.21
CCDC38-207ENST00000549752 RGL2O15211 777 aa13.72□□□□□ -0.21
CCDC38-207ENST00000549752 A1BGP04217 495 aa13.72□□□□□ -0.21
CCDC38-207ENST00000549752 DALRD3Q5D0E6 543 aaKnown RBP13.72□□□□□ -0.21
CCDC38-207ENST00000549752 DZIP3Q86Y13 1208 aaKnown RBP13.72□□□□□ -0.21
CCDC38-207ENST00000549752 WWC3Q9ULE0 1092 aa13.72□□□□□ -0.21
CCDC38-207ENST00000549752 USP16Q9Y5T5 823 aa13.72□□□□□ -0.21
CCDC38-207ENST00000549752 NPHP1O15259 732 aa13.71□□□□□ -0.21
CCDC38-207ENST00000549752 RIPK4P57078 832 aa13.71□□□□□ -0.21
CCDC38-207ENST00000549752 CLEC4GQ6UXB4 293 aa13.71□□□□□ -0.21
CCDC38-207ENST00000549752 SETDB2Q96T68 719 aa13.71□□□□□ -0.21
CCDC38-207ENST00000549752 BCL2L12Q9HB09 334 aa13.71□□□□□ -0.21
CCDC38-207ENST00000549752 BABAM1Q9NWV8 329 aa13.71□□□□□ -0.21
CCDC38-207ENST00000549752 TBC1D2BQ9UPU7 963 aa13.71□□□□□ -0.21
CCDC38-207ENST00000549752 ARFGEF2Q9Y6D5 1785 aa13.71□□□□□ -0.22
CCDC38-207ENST00000549752 GIGYF1O75420 1035 aaPredicted RBP13.7□□□□□ -0.22
CCDC38-207ENST00000549752 BICDL1Q6ZP65 573 aa13.7□□□□□ -0.22
CCDC38-207ENST00000549752 ARHGAP27Q6ZUM4 889 aa13.7□□□□□ -0.22
CCDC38-207ENST00000549752 DICER1Q9UPY3 1922 aaKnown RBP13.69□□□□□ -0.22
CCDC38-207ENST00000549752 H0YIN7 160 aa13.69□□□□□ -0.22
CCDC38-207ENST00000549752 KCNA3P22001 575 aa13.69□□□□□ -0.22
CCDC38-207ENST00000549752 PDE6BP35913 854 aa13.69□□□□□ -0.22
CCDC38-207ENST00000549752 TMPOP42166 694 aaKnown RBP13.69□□□□□ -0.22
CCDC38-207ENST00000549752 TBC1D9BQ66K14 1250 aa13.69□□□□□ -0.22
CCDC38-207ENST00000549752 RUNDC1Q96C34 613 aa13.69□□□□□ -0.22
CCDC38-207ENST00000549752 PRKRIP1Q9H875 184 aaPredicted RBP13.69□□□□□ -0.22
CCDC38-207ENST00000549752 ATP10DQ9P241 1426 aa13.69□□□□□ -0.22
CCDC38-207ENST00000549752 ADCY9O60503 1353 aa13.69□□□□□ -0.22
CCDC38-207ENST00000549752 CAMTA2O94983 1202 aa13.68□□□□□ -0.22
CCDC38-207ENST00000549752 ST5P78524 1137 aa13.68□□□□□ -0.22
CCDC38-207ENST00000549752 GPBP1L1Q9HC44 474 aaPredicted RBP13.68□□□□□ -0.22
CCDC38-207ENST00000549752 MIS18AQ9NYP9 233 aa13.68□□□□□ -0.22
CCDC38-207ENST00000549752 CHRNA5P30532 468 aa13.67□□□□□ -0.22
CCDC38-207ENST00000549752 EIF4A1P60842 406 aaKnown RBP13.67□□□□□ -0.22
CCDC38-207ENST00000549752 TTLL6Q8N841 843 aa13.67□□□□□ -0.22
CCDC38-207ENST00000549752 CNBD1Q8NA66 436 aa13.67□□□□□ -0.22
CCDC38-207ENST00000549752 BRIP1Q9BX63 1249 aa13.67□□□□□ -0.22
CCDC38-207ENST00000549752 TSPYL4Q9UJ04 414 aa13.67□□□□□ -0.22
CCDC38-207ENST00000549752 COL11A2P13942 1736 aaPredicted RBP13.67□□□□□ -0.22
CCDC38-207ENST00000549752 ERBB4Q15303 1308 aa13.66□□□□□ -0.22
CCDC38-207ENST00000549752 ANKRD36CQ5JPF3 1778 aa13.66□□□□□ -0.22
CCDC38-207ENST00000549752 FER1L6Q2WGJ9 1857 aa13.66□□□□□ -0.22
CCDC38-207ENST00000549752 PRAMEF22A3QJZ6 481 aa13.66□□□□□ -0.22
CCDC38-207ENST00000549752 C2CD5Q86YS7 1000 aa13.66□□□□□ -0.22
CCDC38-207ENST00000549752 THUMPD2Q9BTF0 503 aaKnown RBP13.66□□□□□ -0.22
CCDC38-207ENST00000549752 C1QTNF8P60827 252 aa13.65□□□□□ -0.22
CCDC38-207ENST00000549752 KIF6Q6ZMV9 814 aa13.65□□□□□ -0.22
CCDC38-207ENST00000549752 CIZ1Q9ULV3 898 aaPredicted RBP13.65□□□□□ -0.22
CCDC38-207ENST00000549752 NBPF26B4DH59 902 aa13.64□□□□□ -0.23
CCDC38-207ENST00000549752 ERVV-1B6SEH8 477 aa13.64□□□□□ -0.23
CCDC38-207ENST00000549752 PIP4K2AP48426 406 aaPredicted RBP13.64□□□□□ -0.23
CCDC38-207ENST00000549752 PRR5LQ6MZQ0 368 aa13.64□□□□□ -0.23
CCDC38-207ENST00000549752 NBPF10Q6P3W6 841 aaKnown RBP13.64□□□□□ -0.23
CCDC38-207ENST00000549752 TPTE2Q6XPS3 522 aa13.64□□□□□ -0.23
CCDC38-207ENST00000549752 NBPF5PQ86XG9 351 aaPredicted RBP13.64□□□□□ -0.23
CCDC38-207ENST00000549752 CCDC146Q8IYE0 955 aa13.64□□□□□ -0.23
CCDC38-207ENST00000549752 NBPF15Q8N660 670 aa13.64□□□□□ -0.23
CCDC38-207ENST00000549752 ADAMTS8Q9UP79 889 aa13.64□□□□□ -0.23
CCDC38-207ENST00000549752 TNRC6CQ9HCJ0 1690 aaKnown RBP13.63□□□□□ -0.23
CCDC38-207ENST00000549752 SLX4Q8IY92 1834 aa13.63□□□□□ -0.23
CCDC38-207ENST00000549752 NEUROD2Q15784 382 aa13.63□□□□□ -0.23
CCDC38-207ENST00000549752 PAXIP1Q6ZW49 1069 aaPredicted RBP13.63□□□□□ -0.23
CCDC38-207ENST00000549752 NIP7Q9Y221 180 aaKnown RBP eCLIP13.63□□□□□ -0.23
CCDC38-207ENST00000549752 TIAM2Q8IVF5 1701 aa13.63□□□□□ -0.23
CCDC38-207ENST00000549752 CALD1Q05682 793 aaKnown RBP13.62□□□□□ -0.23
CCDC38-207ENST00000549752 CNKSR1Q969H4 720 aa13.62□□□□□ -0.23
CCDC38-207ENST00000549752 ZNF622Q969S3 477 aaKnown RBP eCLIP13.62□□□□□ -0.23
CCDC38-207ENST00000549752 NYXQ9GZU5 481 aa13.62□□□□□ -0.23
CCDC38-207ENST00000549752 RRP7AQ9Y3A4 280 aaKnown RBP13.62□□□□□ -0.23
CCDC38-207ENST00000549752 MAP3K15Q6ZN16 1313 aa13.62□□□□□ -0.23
CCDC38-207ENST00000549752 ZC3H4Q9UPT8 1303 aaKnown RBP13.62□□□□□ -0.23
CCDC38-207ENST00000549752 MYL6BP14649 208 aa13.61□□□□□ -0.23
CCDC38-207ENST00000549752 GTF2E1P29083 439 aaPredicted RBP13.61□□□□□ -0.23
CCDC38-207ENST00000549752 SOGA3Q5TF21 947 aa13.61□□□□□ -0.23
CCDC38-207ENST00000549752 C9orf131Q5VYM1 1079 aa13.61□□□□□ -0.23
CCDC38-207ENST00000549752 STYK1Q6J9G0 422 aa13.61□□□□□ -0.23
CCDC38-207ENST00000549752 ZNF526Q8TF50 670 aaPredicted RBP13.61□□□□□ -0.23
CCDC38-207ENST00000549752 CFAP44Q96MT7 982 aa13.61□□□□□ -0.23
CCDC38-207ENST00000549752 CACNA1FO60840 1977 aa13.61□□□□□ -0.23
CCDC38-207ENST00000549752 ZNF316A6NFI3 1004 aaPredicted RBP13.6□□□□□ -0.23
CCDC38-207ENST00000549752 NGEFQ8N5V2 710 aa13.6□□□□□ -0.23
CCDC38-207ENST00000549752 MASTLQ96GX5 879 aa13.6□□□□□ -0.23
CCDC38-207ENST00000549752 RNF181Q9P0P0 153 aa13.6□□□□□ -0.23
CCDC38-207ENST00000549752 KDM2BQ8NHM5 1336 aa13.6□□□□□ -0.23
CCDC38-207ENST00000549752 CHL1O00533 1208 aa13.59□□□□□ -0.23
CCDC38-207ENST00000549752 SRGNP10124 158 aa13.59□□□□□ -0.23
CCDC38-207ENST00000549752 EIF2S2P20042 333 aaKnown RBP13.59□□□□□ -0.23
CCDC38-207ENST00000549752 LMNB1P20700 586 aa13.59□□□□□ -0.23
CCDC38-207ENST00000549752 SPRYD3Q8NCJ5 442 aa13.59□□□□□ -0.23
CCDC38-207ENST00000549752 TRIM35Q9UPQ4 493 aa13.59□□□□□ -0.23
CCDC38-207ENST00000549752 LAS1LQ9Y4W2 734 aaKnown RBP13.59□□□□□ -0.23
CCDC38-207ENST00000549752 IBTKQ9P2D0 1353 aaPredicted RBP13.58□□□□□ -0.23
CCDC38-207ENST00000549752 HOXB7P09629 217 aa13.58□□□□□ -0.24
CCDC38-207ENST00000549752 NPR1P16066 1061 aa13.58□□□□□ -0.24
CCDC38-207ENST00000549752 CHMP4AQ9BY43 222 aa13.58□□□□□ -0.24
CCDC38-207ENST00000549752 ANP32CO43423 234 aa13.57□□□□□ -0.24
CCDC38-207ENST00000549752 HLFQ16534 295 aa13.57□□□□□ -0.24
CCDC38-207ENST00000549752 HSP90AB3PQ58FF7 597 aa13.57□□□□□ -0.24
CCDC38-207ENST00000549752 GIGYF2Q6Y7W6 1299 aaKnown RBP13.57□□□□□ -0.24
CCDC38-207ENST00000549752 CCDC24Q8N4L8 307 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms