RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 SIN3BO75182 1162 aa8.18□□□□□ -1.1
SNRPF-202ENST00000549580 YBX3P16989 372 aaKnown RBP eCLIP8.18□□□□□ -1.1
SNRPF-202ENST00000549580 ZIC5Q96T25 663 aa8.18□□□□□ -1.1
SNRPF-202ENST00000549580 SSBP4Q9BWG4 385 aaPredicted RBP8.18□□□□□ -1.1
SNRPF-202ENST00000549580 NIFKQ9BYG3 293 aaKnown RBP8.18□□□□□ -1.1
SNRPF-202ENST00000549580 USP3Q9Y6I4 520 aa8.18□□□□□ -1.1
SNRPF-202ENST00000549580 ELNP15502 786 aa8.17□□□□□ -1.1
SNRPF-202ENST00000549580 USP4Q13107 963 aa8.17□□□□□ -1.1
SNRPF-202ENST00000549580 ARSJQ5FYB0 599 aaPredicted RBP8.17□□□□□ -1.1
SNRPF-202ENST00000549580 RNF112Q9ULX5 631 aa8.17□□□□□ -1.1
SNRPF-202ENST00000549580 PAX4O43316 350 aa8.16□□□□□ -1.1
SNRPF-202ENST00000549580 TXKP42681 527 aa8.16□□□□□ -1.1
SNRPF-202ENST00000549580 GDF10P55107 478 aa8.16□□□□□ -1.1
SNRPF-202ENST00000549580 TNFRSF25Q93038 417 aa8.16□□□□□ -1.1
SNRPF-202ENST00000549580 SERTAD1Q9UHV2 236 aa8.16□□□□□ -1.1
SNRPF-202ENST00000549580 SUPT5HO00267 1087 aaKnown RBP8.15□□□□□ -1.1
SNRPF-202ENST00000549580 INHAP05111 366 aa8.15□□□□□ -1.1
SNRPF-202ENST00000549580 TP53INP1Q96A56 240 aa8.15□□□□□ -1.1
SNRPF-202ENST00000549580 ZDHHC3Q9NYG2 299 aa8.15□□□□□ -1.1
SNRPF-202ENST00000549580 NBPF1Q3BBV0 1214 aa8.14□□□□□ -1.11
SNRPF-202ENST00000549580 C20orf204Q6ZNR8 217 aa8.14□□□□□ -1.11
SNRPF-202ENST00000549580 LENG1Q96BZ8 264 aaPredicted RBP8.14□□□□□ -1.11
SNRPF-202ENST00000549580 KRTAP4-9Q9BYQ8 210 aa8.14□□□□□ -1.11
SNRPF-202ENST00000549580 PARP3Q9Y6F1 533 aa8.14□□□□□ -1.11
SNRPF-202ENST00000549580 SMTNP53814 917 aa8.13□□□□□ -1.11
SNRPF-202ENST00000549580 SLFNL1Q499Z3 407 aa8.13□□□□□ -1.11
SNRPF-202ENST00000549580 BANK1Q8NDB2 785 aa8.13□□□□□ -1.11
SNRPF-202ENST00000549580 ZMYND15Q9H091 742 aa8.13□□□□□ -1.11
SNRPF-202ENST00000549580 TBC1D2BQ9UPU7 963 aa8.13□□□□□ -1.11
SNRPF-202ENST00000549580 TATP17735 454 aaPredicted RBP8.12□□□□□ -1.11
SNRPF-202ENST00000549580 HOMEZQ8IX15 550 aa8.12□□□□□ -1.11
SNRPF-202ENST00000549580 IQSEC3Q9UPP2 1182 aaPredicted RBP8.12□□□□□ -1.11
SNRPF-202ENST00000549580 A0A0A0MRY4 1105 aa8.11□□□□□ -1.11
SNRPF-202ENST00000549580 NRG1Q02297 640 aaPredicted RBP8.11□□□□□ -1.11
SNRPF-202ENST00000549580 SHISA2Q6UWI4 295 aa8.11□□□□□ -1.11
SNRPF-202ENST00000549580 TMEM229AB2RXF0 380 aa8.1□□□□□ -1.11
SNRPF-202ENST00000549580 IRF5Q13568 498 aa8.1□□□□□ -1.11
SNRPF-202ENST00000549580 SLC30A3Q99726 388 aa8.1□□□□□ -1.11
SNRPF-202ENST00000549580 CHIC2Q9UKJ5 165 aa8.1□□□□□ -1.11
SNRPF-202ENST00000549580 GJA3Q9Y6H8 435 aa8.1□□□□□ -1.11
SNRPF-202ENST00000549580 TXLNAP40222 546 aa8.09□□□□□ -1.11
SNRPF-202ENST00000549580 ADH7P40394 386 aa8.09□□□□□ -1.11
SNRPF-202ENST00000549580 TRAPPC3LQ5T215 181 aa8.09□□□□□ -1.11
SNRPF-202ENST00000549580 CABP1Q9NZU7 370 aa8.09□□□□□ -1.11
SNRPF-202ENST00000549580 VAC14Q08AM6 782 aa8.08□□□□□ -1.12
SNRPF-202ENST00000549580 SOCS7O14512 581 aa8.07□□□□□ -1.12
SNRPF-202ENST00000549580 EIF4G2P78344 907 aaKnown RBP eCLIP8.07□□□□□ -1.12
SNRPF-202ENST00000549580 MTFR1Q15390 333 aa8.07□□□□□ -1.12
SNRPF-202ENST00000549580 BICDL1Q6ZP65 573 aa8.07□□□□□ -1.12
SNRPF-202ENST00000549580 A6NJY4 79 aa8.06□□□□□ -1.12
SNRPF-202ENST00000549580 CDK2AP1O14519 115 aa8.06□□□□□ -1.12
SNRPF-202ENST00000549580 ILDR2Q71H61 639 aa8.06□□□□□ -1.12
SNRPF-202ENST00000549580 SLC4A9Q96Q91 983 aa8.06□□□□□ -1.12
SNRPF-202ENST00000549580 SFSWAPQ12872 951 aaKnown RBP8.05□□□□□ -1.12
SNRPF-202ENST00000549580 FLIIQ13045 1269 aa8.05□□□□□ -1.12
SNRPF-202ENST00000549580 LRRC69Q6ZNQ3 347 aa8.05□□□□□ -1.12
SNRPF-202ENST00000549580 ZDHHC1Q8WTX9 485 aa8.05□□□□□ -1.12
SNRPF-202ENST00000549580 SIRT1Q96EB6 747 aa8.05□□□□□ -1.12
SNRPF-202ENST00000549580 KRTAP4-2Q9BYR5 136 aa8.05□□□□□ -1.12
SNRPF-202ENST00000549580 LILRB5O75023 590 aa8.04□□□□□ -1.12
SNRPF-202ENST00000549580 FZD5Q13467 585 aa8.04□□□□□ -1.12
SNRPF-202ENST00000549580 RAB44Q7Z6P3 723 aaPredicted RBP8.04□□□□□ -1.12
SNRPF-202ENST00000549580 PLPP7Q8NBV4 271 aa8.04□□□□□ -1.12
SNRPF-202ENST00000549580 PCMTD2Q9NV79 361 aa8.04□□□□□ -1.12
SNRPF-202ENST00000549580 RAC1P63000 192 aa8.03□□□□□ -1.12
SNRPF-202ENST00000549580 SPEM2Q0P670 501 aa8.02□□□□□ -1.13
SNRPF-202ENST00000549580 TBCELQ5QJ74 424 aa8.02□□□□□ -1.13
SNRPF-202ENST00000549580 FMR1NBQ8N0W7 255 aaPredicted RBP8.02□□□□□ -1.13
SNRPF-202ENST00000549580 APBB1O00213 710 aa8.01□□□□□ -1.13
SNRPF-202ENST00000549580 PIK3CDO00329 1044 aa8.01□□□□□ -1.13
SNRPF-202ENST00000549580 C7orf43Q8WVR3 580 aa8.01□□□□□ -1.13
SNRPF-202ENST00000549580 USP21Q9UK80 565 aa8.01□□□□□ -1.13
SNRPF-202ENST00000549580 PCDHGA11Q9Y5H2 935 aa8.01□□□□□ -1.13
SNRPF-202ENST00000549580 EML1O00423 815 aa8□□□□□ -1.13
SNRPF-202ENST00000549580 CD97P48960 835 aa8□□□□□ -1.13
SNRPF-202ENST00000549580 IRAK1P51617 712 aa8□□□□□ -1.13
SNRPF-202ENST00000549580 SH3PXD2AQ5TCZ1 1133 aa8□□□□□ -1.13
SNRPF-202ENST00000549580 L3MBTL2Q969R5 705 aa8□□□□□ -1.13
SNRPF-202ENST00000549580 TAL1P17542 331 aaPredicted RBP7.99□□□□□ -1.13
SNRPF-202ENST00000549580 MAP7D1Q3KQU3 841 aa7.99□□□□□ -1.13
SNRPF-202ENST00000549580 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.99□□□□□ -1.13
SNRPF-202ENST00000549580 PRR23CQ6ZRP0 262 aa7.98□□□□□ -1.13
SNRPF-202ENST00000549580 WFDC12Q8WWY7 111 aa7.98□□□□□ -1.13
SNRPF-202ENST00000549580 GDPD2Q9HCC8 539 aa7.98□□□□□ -1.13
SNRPF-202ENST00000549580 NOS3P29474 1203 aa7.97□□□□□ -1.13
SNRPF-202ENST00000549580 SSTR4P31391 388 aa7.97□□□□□ -1.13
SNRPF-202ENST00000549580 NEUROD1Q13562 356 aa7.97□□□□□ -1.13
SNRPF-202ENST00000549580 MEGF10Q96KG7 1140 aa7.97□□□□□ -1.13
SNRPF-202ENST00000549580 JPH1Q9HDC5 661 aaPredicted RBP7.97□□□□□ -1.13
SNRPF-202ENST00000549580 SCHIP1Q9P0W5 487 aaPredicted RBP7.97□□□□□ -1.13
SNRPF-202ENST00000549580 RNF114Q9Y508 228 aa7.97□□□□□ -1.13
SNRPF-202ENST00000549580 GPC6Q9Y625 555 aaPredicted RBP7.97□□□□□ -1.13
SNRPF-202ENST00000549580 A6NJR5 290 aa7.96□□□□□ -1.14
SNRPF-202ENST00000549580 NOS2P35228 1153 aa7.96□□□□□ -1.14
SNRPF-202ENST00000549580 ABL2P42684 1182 aa7.96□□□□□ -1.14
SNRPF-202ENST00000549580 IREB2P48200 963 aaKnown RBP7.96□□□□□ -1.14
SNRPF-202ENST00000549580 AFF1P51825 1210 aaKnown RBP7.96□□□□□ -1.14
SNRPF-202ENST00000549580 KCNQ4P56696 695 aa7.96□□□□□ -1.14
SNRPF-202ENST00000549580 ZNF358Q9NW07 568 aa7.96□□□□□ -1.14
SNRPF-202ENST00000549580 OAS3Q9Y6K5 1087 aaKnown RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms