RNA–Protein interactions for RNA: ENST00000549461.1

PKP2-206, Transcript of plakophilin 2, humanhuman

TSL 2

Gene PKP2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-206ENST00000549461 ARFGEF2Q9Y6D5 1785 aa11.89□□□□□ -0.51
PKP2-206ENST00000549461 GNPATO15228 680 aa11.88□□□□□ -0.51
PKP2-206ENST00000549461 NEFLP07196 543 aa11.88□□□□□ -0.51
PKP2-206ENST00000549461 HLFQ16534 295 aa11.88□□□□□ -0.51
PKP2-206ENST00000549461 RC3H1Q5TC82 1133 aaKnown RBP11.88□□□□□ -0.51
PKP2-206ENST00000549461 KSR2Q6VAB6 950 aa11.88□□□□□ -0.51
PKP2-206ENST00000549461 ANKRD13DQ6ZTN6 518 aa11.88□□□□□ -0.51
PKP2-206ENST00000549461 ITPRIPQ8IWB1 547 aa11.88□□□□□ -0.51
PKP2-206ENST00000549461 DNAAF4Q8WXU2 420 aa11.88□□□□□ -0.51
PKP2-206ENST00000549461 ARXQ96QS3 562 aa11.88□□□□□ -0.51
PKP2-206ENST00000549461 COL15A1P39059 1388 aa11.88□□□□□ -0.51
PKP2-206ENST00000549461 PHF14O94880 888 aa11.87□□□□□ -0.51
PKP2-206ENST00000549461 IGKV5-2P06315 115 aa11.87□□□□□ -0.51
PKP2-206ENST00000549461 MVPQ14764 893 aaKnown RBP11.87□□□□□ -0.51
PKP2-206ENST00000549461 BEND3Q5T5X7 828 aa11.87□□□□□ -0.51
PKP2-206ENST00000549461 INTS3Q68E01 1043 aaKnown RBP11.87□□□□□ -0.51
PKP2-206ENST00000549461 RIC3Q7Z5B4 369 aa11.87□□□□□ -0.51
PKP2-206ENST00000549461 PLBD2Q8NHP8 589 aa11.87□□□□□ -0.51
PKP2-206ENST00000549461 ANO8Q9HCE9 1232 aaPredicted RBP11.87□□□□□ -0.51
PKP2-206ENST00000549461 ATP5J2-PTCD1G3V325 749 aa11.86□□□□□ -0.51
PKP2-206ENST00000549461 RPS6KA4O75676 772 aa11.86□□□□□ -0.51
PKP2-206ENST00000549461 DDX58O95786 925 aaKnown RBP11.86□□□□□ -0.51
PKP2-206ENST00000549461 CWF19L2Q2TBE0 894 aaKnown RBP11.86□□□□□ -0.51
PKP2-206ENST00000549461 DZIP3Q86Y13 1208 aaKnown RBP11.86□□□□□ -0.51
PKP2-206ENST00000549461 AKT1S1Q96B36 256 aa11.86□□□□□ -0.51
PKP2-206ENST00000549461 AK7Q96M32 723 aa11.86□□□□□ -0.51
PKP2-206ENST00000549461 MYD88Q99836 296 aa11.86□□□□□ -0.51
PKP2-206ENST00000549461 SRP68Q9UHB9 627 aaKnown RBP11.86□□□□□ -0.51
PKP2-206ENST00000549461 PXDNLA1KZ92 1463 aa11.86□□□□□ -0.51
PKP2-206ENST00000549461 N4BP2Q86UW6 1770 aaPredicted RBP11.86□□□□□ -0.51
PKP2-206ENST00000549461 UBR3Q6ZT12 1888 aa11.86□□□□□ -0.51
PKP2-206ENST00000549461 TUBGCP6Q96RT7 1819 aa11.86□□□□□ -0.51
PKP2-206ENST00000549461 C4AP0C0L4 1744 aa11.86□□□□□ -0.51
PKP2-206ENST00000549461 MAP3K15Q6ZN16 1313 aa11.86□□□□□ -0.51
PKP2-206ENST00000549461 CAMTA2O94983 1202 aa11.85□□□□□ -0.51
PKP2-206ENST00000549461 SF3B2Q13435 895 aaKnown RBP11.85□□□□□ -0.51
PKP2-206ENST00000549461 KIF6Q6ZMV9 814 aa11.85□□□□□ -0.51
PKP2-206ENST00000549461 ARHGEF1Q92888 912 aaKnown RBP11.85□□□□□ -0.51
PKP2-206ENST00000549461 UPF1Q92900 1129 aaKnown RBP eCLIP11.85□□□□□ -0.51
PKP2-206ENST00000549461 METTL22Q9BUU2 404 aaPredicted RBP11.85□□□□□ -0.51
PKP2-206ENST00000549461 ATP10DQ9P241 1426 aa11.85□□□□□ -0.51
PKP2-206ENST00000549461 ZBTB7BO15156 539 aaPredicted RBP11.84□□□□□ -0.51
PKP2-206ENST00000549461 MS4A1P11836 297 aa11.84□□□□□ -0.51
PKP2-206ENST00000549461 BAG6P46379 1132 aa11.84□□□□□ -0.51
PKP2-206ENST00000549461 MEIS3Q99687 375 aa11.84□□□□□ -0.51
PKP2-206ENST00000549461 BCL2L12Q9HB09 334 aa11.84□□□□□ -0.51
PKP2-206ENST00000549461 RTCBQ9Y3I0 505 aaKnown RBP11.84□□□□□ -0.51
PKP2-206ENST00000549461 BCORQ6W2J9 1755 aa11.84□□□□□ -0.51
PKP2-206ENST00000549461 SCN7AQ01118 1682 aa11.84□□□□□ -0.51
PKP2-206ENST00000549461 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.83□□□□□ -0.52
PKP2-206ENST00000549461 CCT4P50991 539 aaKnown RBP11.83□□□□□ -0.52
PKP2-206ENST00000549461 JARID2Q92833 1246 aaPredicted RBP11.83□□□□□ -0.52
PKP2-206ENST00000549461 SRCIN1Q9C0H9 1055 aa11.83□□□□□ -0.52
PKP2-206ENST00000549461 C1orf115Q9H7X2 142 aa11.83□□□□□ -0.52
PKP2-206ENST00000549461 NEURL1BA8MQ27 555 aa11.82□□□□□ -0.52
PKP2-206ENST00000549461 ERVV-1B6SEH8 477 aa11.82□□□□□ -0.52
PKP2-206ENST00000549461 GPTP24298 496 aa11.82□□□□□ -0.52
PKP2-206ENST00000549461 TCIRG1Q13488 830 aa11.82□□□□□ -0.52
PKP2-206ENST00000549461 USPL1Q5W0Q7 1092 aa11.82□□□□□ -0.52
PKP2-206ENST00000549461 GIGYF2Q6Y7W6 1299 aaKnown RBP11.82□□□□□ -0.52
PKP2-206ENST00000549461 LINS1Q8NG48 757 aa11.82□□□□□ -0.52
PKP2-206ENST00000549461 ISCA1Q9BUE6 129 aa11.82□□□□□ -0.52
PKP2-206ENST00000549461 USP44Q9H0E7 712 aa11.82□□□□□ -0.52
PKP2-206ENST00000549461 ZBTB40Q9NUA8 1239 aa11.82□□□□□ -0.52
PKP2-206ENST00000549461 DDX19BQ9UMR2 479 aa11.82□□□□□ -0.52
PKP2-206ENST00000549461 UBN2Q6ZU65 1347 aa11.82□□□□□ -0.52
PKP2-206ENST00000549461 NUP98P52948 1817 aa11.81□□□□□ -0.52
PKP2-206ENST00000549461 AFDNP55196 1824 aaKnown RBP11.81□□□□□ -0.52
PKP2-206ENST00000549461 A0A087WZG4 1122 aa11.81□□□□□ -0.52
PKP2-206ENST00000549461 NBPF7P0C2Y1 421 aaPredicted RBP11.81□□□□□ -0.52
PKP2-206ENST00000549461 TRAPPC3LQ5T215 181 aa11.81□□□□□ -0.52
PKP2-206ENST00000549461 COL23A1Q86Y22 540 aaPredicted RBP11.81□□□□□ -0.52
PKP2-206ENST00000549461 CCDC125Q86Z20 511 aa11.81□□□□□ -0.52
PKP2-206ENST00000549461 TFCP2L1Q9NZI6 479 aa11.81□□□□□ -0.52
PKP2-206ENST00000549461 NARFQ9UHQ1 456 aa11.81□□□□□ -0.52
PKP2-206ENST00000549461 PCDHB15Q9Y5E8 787 aa11.81□□□□□ -0.52
PKP2-206ENST00000549461 ANKRD36CQ5JPF3 1778 aa11.81□□□□□ -0.52
PKP2-206ENST00000549461 PNPLA7Q6ZV29 1317 aa11.81□□□□□ -0.52
PKP2-206ENST00000549461 USP42Q9H9J4 1324 aaKnown RBP11.81□□□□□ -0.52
PKP2-206ENST00000549461 ALDH1L1O75891 902 aa11.8□□□□□ -0.52
PKP2-206ENST00000549461 SSFA2P28290 1259 aa11.8□□□□□ -0.52
PKP2-206ENST00000549461 NEXNQ0ZGT2 675 aa11.8□□□□□ -0.52
PKP2-206ENST00000549461 GCKRQ14397 625 aa11.8□□□□□ -0.52
PKP2-206ENST00000549461 NPM2Q86SE8 214 aaKnown RBP11.8□□□□□ -0.52
PKP2-206ENST00000549461 ZNF34Q8IZ26 560 aa11.8□□□□□ -0.52
PKP2-206ENST00000549461 SYNE4Q8N205 404 aa11.8□□□□□ -0.52
PKP2-206ENST00000549461 PDGFDQ9GZP0 370 aaPredicted RBP11.8□□□□□ -0.52
PKP2-206ENST00000549461 ADRA2BP18089 450 aa11.79□□□□□ -0.52
PKP2-206ENST00000549461 RFC4P35249 363 aa11.79□□□□□ -0.52
PKP2-206ENST00000549461 SLC15A2Q16348 729 aa11.79□□□□□ -0.52
PKP2-206ENST00000549461 RTL5Q5HYW3 569 aaPredicted RBP11.79□□□□□ -0.52
PKP2-206ENST00000549461 TBC1D9BQ66K14 1250 aa11.79□□□□□ -0.52
PKP2-206ENST00000549461 B4GALNT3Q6L9W6 998 aa11.79□□□□□ -0.52
PKP2-206ENST00000549461 BICDL1Q6ZP65 573 aa11.79□□□□□ -0.52
PKP2-206ENST00000549461 NLRP10Q86W26 655 aa11.79□□□□□ -0.52
PKP2-206ENST00000549461 FAM177BA6PVY3 158 aa11.78□□□□□ -0.52
PKP2-206ENST00000549461 GRM8O00222 908 aa11.78□□□□□ -0.52
PKP2-206ENST00000549461 ZPR1O75312 459 aa11.78□□□□□ -0.52
PKP2-206ENST00000549461 GYS1P13807 737 aa11.78□□□□□ -0.52
PKP2-206ENST00000549461 CASP7P55210 303 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms