RNA–Protein interactions for RNA: ENST00000549421.1

TSPAN8-204, Transcript of tetraspanin 8, humanhuman

TSL 3

Gene TSPAN8, Length 246 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-204ENST00000549421 RNF34Q969K3 372 aa6.29□□□□□ -1.4
TSPAN8-204ENST00000549421 NGLY1Q96IV0 654 aa6.29□□□□□ -1.4
TSPAN8-204ENST00000549421 PHACTR1Q9C0D0 580 aa6.29□□□□□ -1.4
TSPAN8-204ENST00000549421 ZDHHC3Q9NYG2 299 aa6.29□□□□□ -1.4
TSPAN8-204ENST00000549421 POLIQ9UNA4 740 aa6.29□□□□□ -1.4
TSPAN8-204ENST00000549421 SPG7Q9UQ90 795 aa6.29□□□□□ -1.4
TSPAN8-204ENST00000549421 PNMA6FA0A0J9YX94 578 aa6.28□□□□□ -1.4
TSPAN8-204ENST00000549421 ALDH1A1P00352 501 aa6.28□□□□□ -1.4
TSPAN8-204ENST00000549421 HDLBPQ00341 1268 aaKnown RBP6.28□□□□□ -1.4
TSPAN8-204ENST00000549421 DNM1Q05193 864 aaKnown RBP6.28□□□□□ -1.4
TSPAN8-204ENST00000549421 NBPF10Q6P3W6 841 aaKnown RBP6.28□□□□□ -1.4
TSPAN8-204ENST00000549421 SNIP1Q8TAD8 396 aaKnown RBP6.28□□□□□ -1.4
TSPAN8-204ENST00000549421 PIK3R5Q8WYR1 880 aa6.28□□□□□ -1.4
TSPAN8-204ENST00000549421 RNF166Q96A37 237 aaPredicted RBP6.28□□□□□ -1.4
TSPAN8-204ENST00000549421 CRELD1Q96HD1 420 aa6.28□□□□□ -1.4
TSPAN8-204ENST00000549421 CSRNP1Q96S65 589 aa6.28□□□□□ -1.4
TSPAN8-204ENST00000549421 TGIF2Q9GZN2 237 aa6.28□□□□□ -1.4
TSPAN8-204ENST00000549421 NIF3L1Q9GZT8 377 aa6.28□□□□□ -1.4
TSPAN8-204ENST00000549421 ANKIB1Q9P2G1 1089 aa6.28□□□□□ -1.4
TSPAN8-204ENST00000549421 FNDC3AQ9Y2H6 1198 aaKnown RBP6.28□□□□□ -1.4
TSPAN8-204ENST00000549421 TGFBR3LH3BV60 316 aa6.27□□□□□ -1.41
TSPAN8-204ENST00000549421 MEN1O00255 615 aa6.27□□□□□ -1.41
TSPAN8-204ENST00000549421 ZNF76P36508 570 aa6.27□□□□□ -1.41
TSPAN8-204ENST00000549421 ETFBKMTQ8IXQ9 262 aa6.27□□□□□ -1.41
TSPAN8-204ENST00000549421 ZNF295-AS1Q8N0V1 137 aa6.27□□□□□ -1.41
TSPAN8-204ENST00000549421 SLC43A3Q8NBI5 491 aa6.27□□□□□ -1.41
TSPAN8-204ENST00000549421 ZDHHC1Q8WTX9 485 aa6.27□□□□□ -1.41
TSPAN8-204ENST00000549421 NLRP2Q9NX02 1062 aa6.27□□□□□ -1.41
TSPAN8-204ENST00000549421 TATP17735 454 aaPredicted RBP6.26□□□□□ -1.41
TSPAN8-204ENST00000549421 SPRYD7Q5W111 196 aa6.26□□□□□ -1.41
TSPAN8-204ENST00000549421 ZNF598Q86UK7 904 aaKnown RBP6.26□□□□□ -1.41
TSPAN8-204ENST00000549421 TREML1Q86YW5 311 aa6.26□□□□□ -1.41
TSPAN8-204ENST00000549421 RHPN1Q8TCX5 695 aa6.26□□□□□ -1.41
TSPAN8-204ENST00000549421 ARMC5Q96C12 935 aa6.26□□□□□ -1.41
TSPAN8-204ENST00000549421 CCSER2Q9H7U1 834 aa6.26□□□□□ -1.41
TSPAN8-204ENST00000549421 HCN4Q9Y3Q4 1203 aa6.26□□□□□ -1.41
TSPAN8-204ENST00000549421 AK5Q9Y6K8 562 aa6.26□□□□□ -1.41
TSPAN8-204ENST00000549421 ZBTB39O15060 712 aa6.25□□□□□ -1.41
TSPAN8-204ENST00000549421 CPNE3O75131 537 aaKnown RBP6.25□□□□□ -1.41
TSPAN8-204ENST00000549421 ZIC2O95409 532 aaPredicted RBP6.25□□□□□ -1.41
TSPAN8-204ENST00000549421 WDR44Q5JSH3 913 aa6.25□□□□□ -1.41
TSPAN8-204ENST00000549421 SLC27A3Q5K4L6 730 aa6.25□□□□□ -1.41
TSPAN8-204ENST00000549421 SRCIN1Q9C0H9 1055 aa6.25□□□□□ -1.41
TSPAN8-204ENST00000549421 C11orf16Q9NQ32 467 aa6.25□□□□□ -1.41
TSPAN8-204ENST00000549421 USP3Q9Y6I4 520 aa6.25□□□□□ -1.41
TSPAN8-204ENST00000549421 SPATA31C2B4DYI2 1134 aa6.24□□□□□ -1.41
TSPAN8-204ENST00000549421 EPB42P16452 691 aa6.24□□□□□ -1.41
TSPAN8-204ENST00000549421 EIF4BP23588 611 aaKnown RBP6.24□□□□□ -1.41
TSPAN8-204ENST00000549421 RNF144AP50876 292 aaPredicted RBP6.24□□□□□ -1.41
TSPAN8-204ENST00000549421 WDR4P57081 412 aaKnown RBP6.24□□□□□ -1.41
TSPAN8-204ENST00000549421 FANCCQ00597 558 aa6.24□□□□□ -1.41
TSPAN8-204ENST00000549421 ZNF697Q5TEC3 545 aa6.24□□□□□ -1.41
TSPAN8-204ENST00000549421 PDE12Q6L8Q7 609 aaKnown RBP6.24□□□□□ -1.41
TSPAN8-204ENST00000549421 XKR5Q6UX68 686 aa6.24□□□□□ -1.41
TSPAN8-204ENST00000549421 ATCAYQ86WG3 371 aa6.24□□□□□ -1.41
TSPAN8-204ENST00000549421 NT5DC4Q86YG4 428 aa6.24□□□□□ -1.41
TSPAN8-204ENST00000549421 KDF1Q8NAX2 398 aaPredicted RBP6.24□□□□□ -1.41
TSPAN8-204ENST00000549421 SNX29Q8TEQ0 813 aa6.24□□□□□ -1.41
TSPAN8-204ENST00000549421 NUDT16Q96DE0 195 aaKnown RBP6.24□□□□□ -1.41
TSPAN8-204ENST00000549421 TSEN34Q9BSV6 310 aaKnown RBP6.24□□□□□ -1.41
TSPAN8-204ENST00000549421 EIF1AYO14602 144 aaKnown RBP6.23□□□□□ -1.41
TSPAN8-204ENST00000549421 MICAL2O94851 1124 aa6.23□□□□□ -1.41
TSPAN8-204ENST00000549421 UPP2O95045 317 aa6.23□□□□□ -1.41
TSPAN8-204ENST00000549421 ARSDP51689 593 aa6.23□□□□□ -1.41
TSPAN8-204ENST00000549421 CBLBQ13191 982 aa6.23□□□□□ -1.41
TSPAN8-204ENST00000549421 LDLRAD1Q5T700 205 aa6.23□□□□□ -1.41
TSPAN8-204ENST00000549421 METTL16Q86W50 562 aaKnown RBP6.23□□□□□ -1.41
TSPAN8-204ENST00000549421 MEIOBQ8N635 442 aa6.23□□□□□ -1.41
TSPAN8-204ENST00000549421 ITPKCQ96DU7 683 aa6.23□□□□□ -1.41
TSPAN8-204ENST00000549421 KLF16Q9BXK1 252 aaPredicted RBP6.23□□□□□ -1.41
TSPAN8-204ENST00000549421 GRIP2Q9C0E4 1043 aa6.23□□□□□ -1.41
TSPAN8-204ENST00000549421 KLK14Q9P0G3 267 aa6.23□□□□□ -1.41
TSPAN8-204ENST00000549421 V9GY48 417 aaPredicted RBP6.23□□□□□ -1.41
TSPAN8-204ENST00000549421 TTC24A2A3L6 582 aaPredicted RBP6.22□□□□□ -1.41
TSPAN8-204ENST00000549421 HSP90B1P14625 803 aaKnown RBP6.22□□□□□ -1.41
TSPAN8-204ENST00000549421 RELBQ01201 579 aa6.22□□□□□ -1.41
TSPAN8-204ENST00000549421 RAD51AP2Q09MP3 1159 aa6.22□□□□□ -1.41
TSPAN8-204ENST00000549421 C8orf34Q49A92 452 aa6.22□□□□□ -1.41
TSPAN8-204ENST00000549421 GPR152Q8TDT2 470 aa6.22□□□□□ -1.41
TSPAN8-204ENST00000549421 NEUROD4Q9HD90 331 aa6.22□□□□□ -1.41
TSPAN8-204ENST00000549421 WWC3Q9ULE0 1092 aa6.22□□□□□ -1.41
TSPAN8-204ENST00000549421 TIMP2P16035 220 aa6.21□□□□□ -1.42
TSPAN8-204ENST00000549421 PLA2G4AP47712 749 aa6.21□□□□□ -1.42
TSPAN8-204ENST00000549421 SH3PXD2AQ5TCZ1 1133 aa6.21□□□□□ -1.42
TSPAN8-204ENST00000549421 POTEGQ6S5H5 508 aa6.21□□□□□ -1.42
TSPAN8-204ENST00000549421 HS2ST1Q7LGA3 356 aa6.21□□□□□ -1.42
TSPAN8-204ENST00000549421 ZNF654Q8IZM8 581 aa6.21□□□□□ -1.42
TSPAN8-204ENST00000549421 CYP4X1Q8N118 509 aa6.21□□□□□ -1.42
TSPAN8-204ENST00000549421 PMEPA1Q969W9 287 aa6.21□□□□□ -1.42
TSPAN8-204ENST00000549421 EMID1Q96A84 441 aaPredicted RBP6.21□□□□□ -1.42
TSPAN8-204ENST00000549421 PUS7Q96PZ0 661 aaKnown RBP6.21□□□□□ -1.42
TSPAN8-204ENST00000549421 SPINT1O43278 529 aa6.2□□□□□ -1.42
TSPAN8-204ENST00000549421 ST13P50502 369 aaKnown RBP6.2□□□□□ -1.42
TSPAN8-204ENST00000549421 PTPN12Q05209 780 aaKnown RBP6.2□□□□□ -1.42
TSPAN8-204ENST00000549421 C4orf17Q53FE4 359 aa6.2□□□□□ -1.42
TSPAN8-204ENST00000549421 FAM26DQ5JW98 314 aa6.2□□□□□ -1.42
TSPAN8-204ENST00000549421 SOGA3Q5TF21 947 aa6.2□□□□□ -1.42
TSPAN8-204ENST00000549421 VPS37DQ86XT2 251 aa6.2□□□□□ -1.42
TSPAN8-204ENST00000549421 SUSD3Q96L08 255 aa6.2□□□□□ -1.42
TSPAN8-204ENST00000549421 FAM161BQ96MY7 647 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms