RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 LGR6Q9HBX8 967 aa16.61■□□□□ 0.25
DDX54-206ENST00000549271 HACL1Q9UJ83 578 aa16.61■□□□□ 0.25
DDX54-206ENST00000549271 SRGNP10124 158 aa16.6■□□□□ 0.25
DDX54-206ENST00000549271 CANXP27824 592 aaKnown RBP16.6■□□□□ 0.25
DDX54-206ENST00000549271 SULT6B1Q6IMI4 303 aa16.6■□□□□ 0.25
DDX54-206ENST00000549271 CNTROBQ8N137 903 aa16.6■□□□□ 0.25
DDX54-206ENST00000549271 ZNF541Q9H0D2 1346 aa16.6■□□□□ 0.25
DDX54-206ENST00000549271 A0A087WZG4 1122 aa16.59■□□□□ 0.25
DDX54-206ENST00000549271 EPHX2P34913 555 aa16.59■□□□□ 0.25
DDX54-206ENST00000549271 MAP1SQ66K74 1059 aaPredicted RBP16.59■□□□□ 0.25
DDX54-206ENST00000549271 PNMA8AQ86V59 439 aaPredicted RBP16.59■□□□□ 0.25
DDX54-206ENST00000549271 C7orf43Q8WVR3 580 aa16.59■□□□□ 0.25
DDX54-206ENST00000549271 CLEC11AQ9Y240 323 aa16.59■□□□□ 0.25
DDX54-206ENST00000549271 PDE4DIPQ5VU43 2346 aa16.59■□□□□ 0.25
DDX54-206ENST00000549271 MORC1Q86VD1 984 aa16.58■□□□□ 0.24
DDX54-206ENST00000549271 LTBP1Q14766 1721 aa16.58■□□□□ 0.24
DDX54-206ENST00000549271 TRPM7Q96QT4 1865 aa16.57■□□□□ 0.24
DDX54-206ENST00000549271 RNMTO43148 476 aaKnown RBP16.57■□□□□ 0.24
DDX54-206ENST00000549271 MASTLQ96GX5 879 aa16.57■□□□□ 0.24
DDX54-206ENST00000549271 ABT1Q9ULW3 272 aaKnown RBP16.57■□□□□ 0.24
DDX54-206ENST00000549271 CNBD1Q8NA66 436 aa16.56■□□□□ 0.24
DDX54-206ENST00000549271 CAPNS2Q96L46 248 aa16.56■□□□□ 0.24
DDX54-206ENST00000549271 BCORQ6W2J9 1755 aa16.56■□□□□ 0.24
DDX54-206ENST00000549271 RNF123Q5XPI4 1314 aa16.55■□□□□ 0.24
DDX54-206ENST00000549271 FKBP4Q02790 459 aaKnown RBP eCLIP16.55■□□□□ 0.24
DDX54-206ENST00000549271 CCDC93Q567U6 631 aa16.55■□□□□ 0.24
DDX54-206ENST00000549271 DDX21Q9NR30 783 aaKnown RBP eCLIP16.55■□□□□ 0.24
DDX54-206ENST00000549271 KNSTRNQ9Y448 316 aa16.55■□□□□ 0.24
DDX54-206ENST00000549271 CASP8AP2Q9UKL3 1982 aa16.55■□□□□ 0.24
DDX54-206ENST00000549271 STARD3NLO95772 234 aa16.54■□□□□ 0.24
DDX54-206ENST00000549271 IL13P35225 146 aa16.54■□□□□ 0.24
DDX54-206ENST00000549271 BEGAINQ9BUH8 593 aa16.54■□□□□ 0.24
DDX54-206ENST00000549271 TBC1D2BQ9UPU7 963 aa16.54■□□□□ 0.24
DDX54-206ENST00000549271 FZD9O00144 591 aa16.53■□□□□ 0.24
DDX54-206ENST00000549271 ECE1P42892 770 aa16.53■□□□□ 0.24
DDX54-206ENST00000549271 ST5P78524 1137 aa16.53■□□□□ 0.24
DDX54-206ENST00000549271 AMER1Q5JTC6 1135 aaPredicted RBP16.53■□□□□ 0.24
DDX54-206ENST00000549271 GPR101Q96P66 508 aaPredicted RBP16.53■□□□□ 0.24
DDX54-206ENST00000549271 SETDB2Q96T68 719 aa16.53■□□□□ 0.24
DDX54-206ENST00000549271 ZNF277Q9NRM2 450 aaPredicted RBP16.53■□□□□ 0.24
DDX54-206ENST00000549271 IL6STP40189 918 aaPredicted RBP16.52■□□□□ 0.24
DDX54-206ENST00000549271 GPC2Q8N158 579 aa16.52■□□□□ 0.24
DDX54-206ENST00000549271 MCOLN1Q9GZU1 580 aa16.52■□□□□ 0.24
DDX54-206ENST00000549271 KIF7Q2M1P5 1343 aa16.51■□□□□ 0.23
DDX54-206ENST00000549271 CAMTA2O94983 1202 aa16.51■□□□□ 0.23
DDX54-206ENST00000549271 CYP4F22Q6NT55 531 aa16.51■□□□□ 0.23
DDX54-206ENST00000549271 TSKSQ9UJT2 592 aa16.51■□□□□ 0.23
DDX54-206ENST00000549271 KLRG2A4D1S0 409 aaPredicted RBP16.5■□□□□ 0.23
DDX54-206ENST00000549271 FMR1Q06787 632 aaKnown RBP eCLIP16.5■□□□□ 0.233e-6■■□□□ 12.6
DDX54-206ENST00000549271 SIPA1L3O60292 1781 aaPredicted RBP16.5■□□□□ 0.23
DDX54-206ENST00000549271 HEG1Q9ULI3 1381 aa16.5■□□□□ 0.23
DDX54-206ENST00000549271 NPHP1O15259 732 aa16.49■□□□□ 0.23
DDX54-206ENST00000549271 NPR1P16066 1061 aa16.49■□□□□ 0.23
DDX54-206ENST00000549271 MAP2K2P36507 400 aa16.49■□□□□ 0.23
DDX54-206ENST00000549271 IARSP41252 1262 aaKnown RBP16.49■□□□□ 0.23
DDX54-206ENST00000549271 CST9Q5W186 159 aa16.49■□□□□ 0.23
DDX54-206ENST00000549271 OLFM4Q6UX06 510 aa16.49■□□□□ 0.23
DDX54-206ENST00000549271 RTKN2Q8IZC4 609 aa16.49■□□□□ 0.23
DDX54-206ENST00000549271 SNED1Q8TER0 1413 aa16.49■□□□□ 0.23
DDX54-206ENST00000549271 MTHFSDQ2M296 383 aaKnown RBP16.48■□□□□ 0.23
DDX54-206ENST00000549271 PAXIP1Q6ZW49 1069 aaPredicted RBP16.48■□□□□ 0.23
DDX54-206ENST00000549271 TTC5Q8N0Z6 440 aa16.48■□□□□ 0.23
DDX54-206ENST00000549271 ZNF496Q96IT1 587 aaPredicted RBP16.48■□□□□ 0.23
DDX54-206ENST00000549271 CFAP44Q96MT7 982 aa16.48■□□□□ 0.23
DDX54-206ENST00000549271 TEX13AQ9BXU3 409 aaPredicted RBP16.48■□□□□ 0.23
DDX54-206ENST00000549271 ZNF330Q9Y3S2 320 aaPredicted RBP16.48■□□□□ 0.23
DDX54-206ENST00000549271 TLL2Q9Y6L7 1015 aa16.48■□□□□ 0.23
DDX54-206ENST00000549271 COL4A5P29400 1685 aa16.47■□□□□ 0.23
DDX54-206ENST00000549271 PER1O15534 1290 aaPredicted RBP16.47■□□□□ 0.23
DDX54-206ENST00000549271 CA12O43570 354 aa16.47■□□□□ 0.23
DDX54-206ENST00000549271 GRM1Q13255 1194 aa16.47■□□□□ 0.23
DDX54-206ENST00000549271 AOC2O75106 756 aa16.46■□□□□ 0.23
DDX54-206ENST00000549271 SYNE4Q8N205 404 aa16.46■□□□□ 0.23
DDX54-206ENST00000549271 TRAF5O00463 557 aa16.45■□□□□ 0.22
DDX54-206ENST00000549271 A1BGP04217 495 aa16.45■□□□□ 0.22
DDX54-206ENST00000549271 NBPF5PQ86XG9 351 aaPredicted RBP16.45■□□□□ 0.22
DDX54-206ENST00000549271 SCNN1DP51172 638 aa16.44■□□□□ 0.22
DDX54-206ENST00000549271 DGKZQ13574 1117 aa16.44■□□□□ 0.22
DDX54-206ENST00000549271 ZNF790Q6PG37 636 aa16.44■□□□□ 0.22
DDX54-206ENST00000549271 DZIP3Q86Y13 1208 aaKnown RBP16.44■□□□□ 0.22
DDX54-206ENST00000549271 PSMD1Q99460 953 aa16.44■□□□□ 0.22
DDX54-206ENST00000549271 HMOX1P09601 288 aa16.43■□□□□ 0.22
DDX54-206ENST00000549271 LMOD1P29536 600 aaPredicted RBP16.43■□□□□ 0.22
DDX54-206ENST00000549271 EPS15P42566 896 aa16.43■□□□□ 0.22
DDX54-206ENST00000549271 BRPF1P55201 1214 aaPredicted RBP16.43■□□□□ 0.22
DDX54-206ENST00000549271 CLEC4GQ6UXB4 293 aa16.43■□□□□ 0.22
DDX54-206ENST00000549271 USP50Q70EL3 339 aaPredicted RBP16.43■□□□□ 0.22
DDX54-206ENST00000549271 SAPCD2Q86UD0 394 aa16.43■□□□□ 0.22
DDX54-206ENST00000549271 JDP2Q8WYK2 163 aa16.43■□□□□ 0.22
DDX54-206ENST00000549271 NPC1L1Q9UHC9 1359 aa16.42■□□□□ 0.22
DDX54-206ENST00000549271 EIF6P56537 245 aaKnown RBP16.42■□□□□ 0.22
DDX54-206ENST00000549271 NPM2Q86SE8 214 aaKnown RBP16.42■□□□□ 0.22
DDX54-206ENST00000549271 HHIPL1Q96JK4 782 aa16.42■□□□□ 0.22
DDX54-206ENST00000549271 GJA3Q9Y6H8 435 aa16.42■□□□□ 0.22
DDX54-206ENST00000549271 DIAPH1O60610 1272 aaKnown RBP16.41■□□□□ 0.22
DDX54-206ENST00000549271 ALDH1B1P30837 517 aa16.41■□□□□ 0.22
DDX54-206ENST00000549271 TPTE2Q6XPS3 522 aa16.4■□□□□ 0.22
DDX54-206ENST00000549271 IL17REQ8NFR9 667 aa16.4■□□□□ 0.22
DDX54-206ENST00000549271 FMNL2Q96PY5 1086 aa16.4■□□□□ 0.22
DDX54-206ENST00000549271 RGL2O15211 777 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms