RNA–Protein interactions for RNA: ENST00000548946.1

UBE2N-202, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 3

Gene UBE2N, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-202ENST00000548946 PTK7Q13308 1070 aa9.3□□□□□ -0.92
UBE2N-202ENST00000548946 SH3PXD2AQ5TCZ1 1133 aa9.3□□□□□ -0.92
UBE2N-202ENST00000548946 C1orf229Q6ZS94 237 aaPredicted RBP9.3□□□□□ -0.92
UBE2N-202ENST00000548946 MARK1Q9P0L2 795 aa9.3□□□□□ -0.92
UBE2N-202ENST00000548946 HCN4Q9Y3Q4 1203 aa9.3□□□□□ -0.92
UBE2N-202ENST00000548946 ATAD2Q6PL18 1390 aa9.29□□□□□ -0.92
UBE2N-202ENST00000548946 FAM196BA6NMK8 535 aa9.29□□□□□ -0.92
UBE2N-202ENST00000548946 CRTC2Q53ET0 693 aaPredicted RBP9.29□□□□□ -0.92
UBE2N-202ENST00000548946 POTEAQ6S8J7 498 aa9.29□□□□□ -0.92
UBE2N-202ENST00000548946 KCTD17Q8N5Z5 321 aa9.29□□□□□ -0.92
UBE2N-202ENST00000548946 HINFPQ9BQA5 517 aa9.29□□□□□ -0.92
UBE2N-202ENST00000548946 AVENQ9NQS1 362 aaPredicted RBP9.29□□□□□ -0.92
UBE2N-202ENST00000548946 ANKIB1Q9P2G1 1089 aa9.29□□□□□ -0.92
UBE2N-202ENST00000548946 PRR12Q9ULL5 1215 aa9.29□□□□□ -0.92
UBE2N-202ENST00000548946 NEURL1BA8MQ27 555 aa9.28□□□□□ -0.92
UBE2N-202ENST00000548946 SHISA8B8ZZ34 492 aa9.28□□□□□ -0.92
UBE2N-202ENST00000548946 AMPD1P23109 780 aa9.28□□□□□ -0.92
UBE2N-202ENST00000548946 ADH6P28332 368 aa9.28□□□□□ -0.92
UBE2N-202ENST00000548946 DPYDQ12882 1025 aa9.28□□□□□ -0.92
UBE2N-202ENST00000548946 STAG2Q8N3U4 1231 aa9.28□□□□□ -0.92
UBE2N-202ENST00000548946 C7orf43Q8WVR3 580 aa9.28□□□□□ -0.92
UBE2N-202ENST00000548946 SCG3Q8WXD2 468 aaKnown RBP9.28□□□□□ -0.92
UBE2N-202ENST00000548946 PHACTR1Q9C0D0 580 aa9.28□□□□□ -0.92
UBE2N-202ENST00000548946 RRAGCQ9HB90 399 aa9.28□□□□□ -0.92
UBE2N-202ENST00000548946 USP17L15C9J2P7 530 aa9.27□□□□□ -0.93
UBE2N-202ENST00000548946 USP17L10C9JJH3 530 aa9.27□□□□□ -0.93
UBE2N-202ENST00000548946 USP17L13C9JLJ4 530 aa9.27□□□□□ -0.93
UBE2N-202ENST00000548946 USP17L12C9JPN9 530 aa9.27□□□□□ -0.93
UBE2N-202ENST00000548946 USP17L11C9JVI0 530 aa9.27□□□□□ -0.93
UBE2N-202ENST00000548946 USP17L21D6R901 530 aa9.27□□□□□ -0.93
UBE2N-202ENST00000548946 USP17L18D6R9N7 530 aa9.27□□□□□ -0.93
UBE2N-202ENST00000548946 USP17L22D6RA61 530 aa9.27□□□□□ -0.93
UBE2N-202ENST00000548946 USP17L17D6RBQ6 530 aa9.27□□□□□ -0.93
UBE2N-202ENST00000548946 USP17L19D6RCP7 530 aa9.27□□□□□ -0.93
UBE2N-202ENST00000548946 USP17L20D6RJB6 530 aa9.27□□□□□ -0.93
UBE2N-202ENST00000548946 EFSO43281 561 aa9.27□□□□□ -0.93
UBE2N-202ENST00000548946 USP17L24Q0WX57 530 aa9.27□□□□□ -0.93
UBE2N-202ENST00000548946 ANKMY2Q8IV38 441 aa9.27□□□□□ -0.93
UBE2N-202ENST00000548946 MKL2Q9ULH7 1088 aa9.27□□□□□ -0.93
UBE2N-202ENST00000548946 C21orf2O43822 256 aa9.26□□□□□ -0.93
UBE2N-202ENST00000548946 EPXP11678 715 aa9.26□□□□□ -0.93
UBE2N-202ENST00000548946 CHMP7Q8WUX9 453 aaPredicted RBP9.26□□□□□ -0.93
UBE2N-202ENST00000548946 C2orf49Q9BVC5 232 aaPredicted RBP9.26□□□□□ -0.93
UBE2N-202ENST00000548946 HCN2Q9UL51 889 aa9.26□□□□□ -0.93
UBE2N-202ENST00000548946 HIF1AQ16665 826 aa9.25□□□□□ -0.93
UBE2N-202ENST00000548946 SNRPNP63162 240 aaKnown RBP9.24□□□□□ -0.93
UBE2N-202ENST00000548946 CFAP70Q5T0N1 1121 aa9.24□□□□□ -0.93
UBE2N-202ENST00000548946 ZNF468Q5VIY5 522 aaPredicted RBP9.24□□□□□ -0.93
UBE2N-202ENST00000548946 ALDH16A1Q8IZ83 802 aa9.24□□□□□ -0.93
UBE2N-202ENST00000548946 BTBD6Q96KE9 485 aa9.24□□□□□ -0.93
UBE2N-202ENST00000548946 CEP63Q96MT8 703 aa9.24□□□□□ -0.93
UBE2N-202ENST00000548946 STRN4Q9NRL3 753 aa9.24□□□□□ -0.93
UBE2N-202ENST00000548946 PIK3R2O00459 728 aa9.23□□□□□ -0.93
UBE2N-202ENST00000548946 RFX1P22670 979 aa9.23□□□□□ -0.93
UBE2N-202ENST00000548946 PCBP4P57723 403 aaKnown RBP9.23□□□□□ -0.93
UBE2N-202ENST00000548946 IGFBP4P22692 258 aa9.22□□□□□ -0.93
UBE2N-202ENST00000548946 HSH2DQ96JZ2 352 aa9.22□□□□□ -0.93
UBE2N-202ENST00000548946 SUSD3Q96L08 255 aa9.22□□□□□ -0.93
UBE2N-202ENST00000548946 BRD7Q9NPI1 651 aa9.22□□□□□ -0.93
UBE2N-202ENST00000548946 KLF15Q9UIH9 416 aa9.22□□□□□ -0.93
UBE2N-202ENST00000548946 SFSWAPQ12872 951 aaKnown RBP9.21□□□□□ -0.94
UBE2N-202ENST00000548946 NEUROD1Q13562 356 aa9.21□□□□□ -0.94
UBE2N-202ENST00000548946 FCHSD1Q86WN1 690 aa9.21□□□□□ -0.94
UBE2N-202ENST00000548946 FAM200AQ8TCP9 573 aa9.21□□□□□ -0.94
UBE2N-202ENST00000548946 NGLY1Q96IV0 654 aa9.21□□□□□ -0.94
UBE2N-202ENST00000548946 IGHA1P01876 353 aa9.2□□□□□ -0.94
UBE2N-202ENST00000548946 DCAF5Q96JK2 942 aa9.2□□□□□ -0.94
UBE2N-202ENST00000548946 ARXQ96QS3 562 aa9.2□□□□□ -0.94
UBE2N-202ENST00000548946 ZMYND15Q9H091 742 aa9.2□□□□□ -0.94
UBE2N-202ENST00000548946 LGR5O75473 907 aa9.19□□□□□ -0.94
UBE2N-202ENST00000548946 ALAS2P22557 587 aa9.19□□□□□ -0.94
UBE2N-202ENST00000548946 RTN1Q16799 776 aa9.19□□□□□ -0.94
UBE2N-202ENST00000548946 CDCA8Q53HL2 280 aa9.19□□□□□ -0.94
UBE2N-202ENST00000548946 GPAT2Q6NUI2 795 aa9.19□□□□□ -0.94
UBE2N-202ENST00000548946 CHSY3Q70JA7 882 aa9.19□□□□□ -0.94
UBE2N-202ENST00000548946 SYT9Q86SS6 491 aa9.19□□□□□ -0.94
UBE2N-202ENST00000548946 ALYREFQ86V81 257 aaKnown RBP9.19□□□□□ -0.94
UBE2N-202ENST00000548946 ZNF280CQ8ND82 737 aa9.19□□□□□ -0.94
UBE2N-202ENST00000548946 SIN3BO75182 1162 aa9.18□□□□□ -0.94
UBE2N-202ENST00000548946 KCNQ4P56696 695 aa9.18□□□□□ -0.94
UBE2N-202ENST00000548946 TYRO3Q06418 890 aa9.18□□□□□ -0.94
UBE2N-202ENST00000548946 VTI1AQ96AJ9 217 aa9.18□□□□□ -0.94
UBE2N-202ENST00000548946 KCNH4Q9UQ05 1017 aa9.18□□□□□ -0.94
UBE2N-202ENST00000548946 ELOA3CA0A087WX78 387 aaPredicted RBP9.17□□□□□ -0.94
UBE2N-202ENST00000548946 ELOA3DA6NLF2 546 aaPredicted RBP9.17□□□□□ -0.94
UBE2N-202ENST00000548946 GNB5O14775 395 aa9.17□□□□□ -0.94
UBE2N-202ENST00000548946 SPEM2Q0P670 501 aa9.17□□□□□ -0.94
UBE2N-202ENST00000548946 ELOA3BQ3SY89 546 aa9.17□□□□□ -0.94
UBE2N-202ENST00000548946 LINC00114Q6XXX2 140 aa9.17□□□□□ -0.94
UBE2N-202ENST00000548946 BTLAQ7Z6A9 289 aa9.17□□□□□ -0.94
UBE2N-202ENST00000548946 ELOA3Q8NG57 546 aa9.17□□□□□ -0.94
UBE2N-202ENST00000548946 FOXO3O43524 673 aa9.16□□□□□ -0.94
UBE2N-202ENST00000548946 HOXB4P17483 251 aaPredicted RBP9.16□□□□□ -0.94
UBE2N-202ENST00000548946 WEE1P30291 646 aa9.16□□□□□ -0.94
UBE2N-202ENST00000548946 DGKGP49619 791 aa9.16□□□□□ -0.94
UBE2N-202ENST00000548946 GRIN2CQ14957 1233 aa9.16□□□□□ -0.94
UBE2N-202ENST00000548946 SLC30A3Q99726 388 aa9.16□□□□□ -0.94
UBE2N-202ENST00000548946 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.16□□□□□ -0.94
UBE2N-202ENST00000548946 NOP53Q9NZM5 478 aaKnown RBP9.16□□□□□ -0.94
UBE2N-202ENST00000548946 PLA2G4EQ3MJ16 856 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms