RNA–Protein interactions for RNA: ENST00000548821.1

GCN1-205, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 504 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-205ENST00000548821 DCTN1Q14203 1278 aa12.65□□□□□ -0.38
GCN1-205ENST00000548821 ERFEQ4G0M1 354 aa12.65□□□□□ -0.38
GCN1-205ENST00000548821 RTKN2Q8IZC4 609 aa12.65□□□□□ -0.38
GCN1-205ENST00000548821 CHMP4AQ9BY43 222 aa12.65□□□□□ -0.38
GCN1-205ENST00000548821 TAOK3Q9H2K8 898 aa12.65□□□□□ -0.38
GCN1-205ENST00000548821 NMRK2Q9NPI5 230 aa12.65□□□□□ -0.38
GCN1-205ENST00000548821 UBR2Q8IWV8 1755 aa12.65□□□□□ -0.38
GCN1-205ENST00000548821 LTBP3Q9NS15 1303 aa12.64□□□□□ -0.39
GCN1-205ENST00000548821 C21orf2O43822 256 aa12.64□□□□□ -0.39
GCN1-205ENST00000548821 WDR43Q15061 677 aaKnown RBP eCLIP12.64□□□□□ -0.39
GCN1-205ENST00000548821 CC2D2BQ6DHV5 1058 aa12.64□□□□□ -0.39
GCN1-205ENST00000548821 PLEKHF1Q96S99 279 aa12.64□□□□□ -0.39
GCN1-205ENST00000548821 ARFGEF1Q9Y6D6 1849 aa12.64□□□□□ -0.39
GCN1-205ENST00000548821 RIPK4P57078 832 aa12.63□□□□□ -0.39
GCN1-205ENST00000548821 CCDC93Q567U6 631 aa12.63□□□□□ -0.39
GCN1-205ENST00000548821 PPP1R42Q7Z4L9 355 aa12.63□□□□□ -0.39
GCN1-205ENST00000548821 TSPYL4Q9UJ04 414 aa12.63□□□□□ -0.39
GCN1-205ENST00000548821 IQCA1LA6NCM1 817 aa12.62□□□□□ -0.39
GCN1-205ENST00000548821 EIF4A1P60842 406 aaKnown RBP12.62□□□□□ -0.39
GCN1-205ENST00000548821 PRPF40BQ6NWY9 871 aaKnown RBP12.62□□□□□ -0.39
GCN1-205ENST00000548821 RRP7AQ9Y3A4 280 aaKnown RBP12.62□□□□□ -0.39
GCN1-205ENST00000548821 KIAA1551Q9HCM1 1747 aa12.62□□□□□ -0.39
GCN1-205ENST00000548821 MYBBP1AQ9BQG0 1328 aaKnown RBP12.62□□□□□ -0.39
GCN1-205ENST00000548821 KLRG2A4D1S0 409 aaPredicted RBP12.61□□□□□ -0.39
GCN1-205ENST00000548821 RASSF7Q02833 373 aa12.61□□□□□ -0.39
GCN1-205ENST00000548821 PARP10Q53GL7 1025 aa12.61□□□□□ -0.39
GCN1-205ENST00000548821 HSP90AB3PQ58FF7 597 aa12.61□□□□□ -0.39
GCN1-205ENST00000548821 MIS18AQ9NYP9 233 aa12.61□□□□□ -0.39
GCN1-205ENST00000548821 ZNF219Q9P2Y4 722 aaPredicted RBP12.61□□□□□ -0.39
GCN1-205ENST00000548821 NRXN2Q9P2S2 1712 aa12.61□□□□□ -0.39
GCN1-205ENST00000548821 MAP3K15Q6ZN16 1313 aa12.61□□□□□ -0.39
GCN1-205ENST00000548821 CALD1Q05682 793 aaKnown RBP12.6□□□□□ -0.39
GCN1-205ENST00000548821 NGEFQ8N5V2 710 aa12.6□□□□□ -0.39
GCN1-205ENST00000548821 RPGRQ92834 1020 aaKnown RBP12.6□□□□□ -0.39
GCN1-205ENST00000548821 SIPA1L3O60292 1781 aaPredicted RBP12.59□□□□□ -0.39
GCN1-205ENST00000548821 PRAMEF22A3QJZ6 481 aa12.59□□□□□ -0.39
GCN1-205ENST00000548821 NBPF26B4DH59 902 aa12.59□□□□□ -0.39
GCN1-205ENST00000548821 NFKBIEO00221 500 aa12.59□□□□□ -0.39
GCN1-205ENST00000548821 MYL6BP14649 208 aa12.59□□□□□ -0.39
GCN1-205ENST00000548821 DDX10Q13206 875 aaKnown RBP12.59□□□□□ -0.39
GCN1-205ENST00000548821 NBPF10Q6P3W6 841 aaKnown RBP12.59□□□□□ -0.39
GCN1-205ENST00000548821 NBPF15Q8N660 670 aa12.59□□□□□ -0.39
GCN1-205ENST00000548821 JDP2Q8WYK2 163 aa12.59□□□□□ -0.39
GCN1-205ENST00000548821 RUNDC1Q96C34 613 aa12.59□□□□□ -0.39
GCN1-205ENST00000548821 RBM17Q96I25 401 aaKnown RBP12.59□□□□□ -0.39
GCN1-205ENST00000548821 VIRMAQ69YN4 1812 aaKnown RBP12.59□□□□□ -0.39
GCN1-205ENST00000548821 BRCA1P38398 1863 aaKnown RBP12.59□□□□□ -0.39
GCN1-205ENST00000548821 RNF123Q5XPI4 1314 aa12.59□□□□□ -0.39
GCN1-205ENST00000548821 TMPOP42166 694 aaKnown RBP12.58□□□□□ -0.4
GCN1-205ENST00000548821 PIP4K2AP48426 406 aaPredicted RBP12.58□□□□□ -0.4
GCN1-205ENST00000548821 FKBP4Q02790 459 aaKnown RBP eCLIP12.58□□□□□ -0.4
GCN1-205ENST00000548821 CCDC24Q8N4L8 307 aa12.58□□□□□ -0.4
GCN1-205ENST00000548821 NLRP3Q96P20 1036 aa12.58□□□□□ -0.4
GCN1-205ENST00000548821 FAM177BA6PVY3 158 aa12.57□□□□□ -0.4
GCN1-205ENST00000548821 HSP90B1P14625 803 aaKnown RBP12.57□□□□□ -0.4
GCN1-205ENST00000548821 GIGYF2Q6Y7W6 1299 aaKnown RBP12.57□□□□□ -0.4
GCN1-205ENST00000548821 VPS33BQ9H267 617 aa12.57□□□□□ -0.4
GCN1-205ENST00000548821 IBTKQ9P2D0 1353 aaPredicted RBP12.56□□□□□ -0.4
GCN1-205ENST00000548821 AFDNP55196 1824 aaKnown RBP12.56□□□□□ -0.4
GCN1-205ENST00000548821 HOXB7P09629 217 aa12.56□□□□□ -0.4
GCN1-205ENST00000548821 EIF2S2P20042 333 aaKnown RBP12.56□□□□□ -0.4
GCN1-205ENST00000548821 HLFQ16534 295 aa12.56□□□□□ -0.4
GCN1-205ENST00000548821 PNMA8AQ86V59 439 aaPredicted RBP12.56□□□□□ -0.4
GCN1-205ENST00000548821 SCN7AQ01118 1682 aa12.56□□□□□ -0.4
GCN1-205ENST00000548821 HOXA10P31260 410 aaPredicted RBP12.55□□□□□ -0.4
GCN1-205ENST00000548821 EIF6P56537 245 aaKnown RBP12.55□□□□□ -0.4
GCN1-205ENST00000548821 CRY2Q49AN0 593 aa12.55□□□□□ -0.4
GCN1-205ENST00000548821 SUPT20HQ8NEM7 779 aa12.55□□□□□ -0.4
GCN1-205ENST00000548821 C7orf43Q8WVR3 580 aa12.55□□□□□ -0.4
GCN1-205ENST00000548821 KLRG1Q96E93 195 aa12.55□□□□□ -0.4
GCN1-205ENST00000548821 CRAMP1Q96RY5 1269 aa12.55□□□□□ -0.4
GCN1-205ENST00000548821 PSMD1Q99460 953 aa12.55□□□□□ -0.4
GCN1-205ENST00000548821 UTP14AQ9BVJ6 771 aaKnown RBP12.55□□□□□ -0.4
GCN1-205ENST00000548821 ZBTB3Q9H5J0 574 aa12.55□□□□□ -0.4
GCN1-205ENST00000548821 NEUROD2Q15784 382 aa12.54□□□□□ -0.4
GCN1-205ENST00000548821 IFFO2Q5TF58 517 aa12.54□□□□□ -0.4
GCN1-205ENST00000548821 CHADLQ6NUI6 762 aa12.54□□□□□ -0.4
GCN1-205ENST00000548821 ZNF34Q8IZ26 560 aa12.54□□□□□ -0.4
GCN1-205ENST00000548821 DNAJC5GQ8N7S2 189 aa12.54□□□□□ -0.4
GCN1-205ENST00000548821 TNRC6CQ9HCJ0 1690 aaKnown RBP12.54□□□□□ -0.4
GCN1-205ENST00000548821 DLEC1Q9Y238 1755 aa12.53□□□□□ -0.4
GCN1-205ENST00000548821 BBOX1O75936 387 aa12.53□□□□□ -0.4
GCN1-205ENST00000548821 ZEB1P37275 1124 aaPredicted RBP12.53□□□□□ -0.4
GCN1-205ENST00000548821 IARSP41252 1262 aaKnown RBP12.53□□□□□ -0.4
GCN1-205ENST00000548821 TMC4Q7Z404 712 aa12.53□□□□□ -0.4
GCN1-205ENST00000548821 SYNE4Q8N205 404 aa12.53□□□□□ -0.4
GCN1-205ENST00000548821 L3MBTL3Q96JM7 780 aaPredicted RBP12.53□□□□□ -0.4
GCN1-205ENST00000548821 THUMPD2Q9BTF0 503 aaKnown RBP12.53□□□□□ -0.4
GCN1-205ENST00000548821 DDX21Q9NR30 783 aaKnown RBP eCLIP12.53□□□□□ -0.4
GCN1-205ENST00000548821 DBF4Q9UBU7 674 aaPredicted RBP12.53□□□□□ -0.4
GCN1-205ENST00000548821 LAS1LQ9Y4W2 734 aaKnown RBP12.53□□□□□ -0.4
GCN1-205ENST00000548821 RIC1Q4ADV7 1423 aa12.53□□□□□ -0.4
GCN1-205ENST00000548821 CHL1O00533 1208 aa12.52□□□□□ -0.41
GCN1-205ENST00000548821 GPTP24298 496 aa12.52□□□□□ -0.41
GCN1-205ENST00000548821 LMOD1P29536 600 aaPredicted RBP12.52□□□□□ -0.41
GCN1-205ENST00000548821 SLC10A5Q5PT55 438 aa12.52□□□□□ -0.41
GCN1-205ENST00000548821 TTLL7Q6ZT98 887 aa12.52□□□□□ -0.41
GCN1-205ENST00000548821 LDHDQ86WU2 507 aa12.52□□□□□ -0.41
GCN1-205ENST00000548821 GPC2Q8N158 579 aa12.52□□□□□ -0.41
GCN1-205ENST00000548821 HYPKQ9NX55 129 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms