RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 KIF6Q6ZMV9 814 aa20.55■□□□□ 0.88
DDX54-205ENST00000548786 ZBTB3Q9H5J0 574 aa20.55■□□□□ 0.88
DDX54-205ENST00000548786 CHD4Q14839 1912 aa20.55■□□□□ 0.88
DDX54-205ENST00000548786 KCNA3P22001 575 aa20.54■□□□□ 0.88
DDX54-205ENST00000548786 IFT57Q9NWB7 429 aa20.54■□□□□ 0.88
DDX54-205ENST00000548786 CALD1Q05682 793 aaKnown RBP20.53■□□□□ 0.88
DDX54-205ENST00000548786 PRR5LQ6MZQ0 368 aa20.53■□□□□ 0.88
DDX54-205ENST00000548786 CNBD1Q8NA66 436 aa20.53■□□□□ 0.88
DDX54-205ENST00000548786 NIP7Q9Y221 180 aaKnown RBP eCLIP20.53■□□□□ 0.88
DDX54-205ENST00000548786 ELL2O00472 640 aaPredicted RBP20.52■□□□□ 0.88
DDX54-205ENST00000548786 ZNF853P0CG23 659 aa20.52■□□□□ 0.88
DDX54-205ENST00000548786 GNAI1P63096 354 aa20.52■□□□□ 0.88
DDX54-205ENST00000548786 PDIA6Q15084 440 aa20.52■□□□□ 0.88
DDX54-205ENST00000548786 NBPF5PQ86XG9 351 aaPredicted RBP20.52■□□□□ 0.88
DDX54-205ENST00000548786 BRCA1P38398 1863 aaKnown RBP20.52■□□□□ 0.87
DDX54-205ENST00000548786 MAP3K15Q6ZN16 1313 aa20.52■□□□□ 0.87
DDX54-205ENST00000548786 AIMP1Q12904 312 aaKnown RBP20.51■□□□□ 0.87
DDX54-205ENST00000548786 HDGFL1Q5TGJ6 251 aa20.51■□□□□ 0.87
DDX54-205ENST00000548786 DUSP27Q5VZP5 1158 aa20.51■□□□□ 0.87
DDX54-205ENST00000548786 CLEC4GQ6UXB4 293 aa20.51■□□□□ 0.87
DDX54-205ENST00000548786 C2CD5Q86YS7 1000 aa20.51■□□□□ 0.87
DDX54-205ENST00000548786 TSR2Q969E8 191 aaKnown RBP20.51■□□□□ 0.87
DDX54-205ENST00000548786 PIM2Q9P1W9 311 aa20.51■□□□□ 0.87
DDX54-205ENST00000548786 CHPF2Q9P2E5 772 aa20.51■□□□□ 0.87
DDX54-205ENST00000548786 ERBB4Q15303 1308 aa20.51■□□□□ 0.87
DDX54-205ENST00000548786 ANKRD31Q8N7Z5 1873 aa20.5■□□□□ 0.87
DDX54-205ENST00000548786 GPTP24298 496 aa20.5■□□□□ 0.87
DDX54-205ENST00000548786 WWC1Q8IX03 1113 aa20.5■□□□□ 0.87
DDX54-205ENST00000548786 ST5P78524 1137 aa20.49■□□□□ 0.87
DDX54-205ENST00000548786 DALRD3Q5D0E6 543 aaKnown RBP20.49■□□□□ 0.87
DDX54-205ENST00000548786 LRP10Q7Z4F1 713 aa20.49■□□□□ 0.87
DDX54-205ENST00000548786 NUP98P52948 1817 aa20.48■□□□□ 0.87
DDX54-205ENST00000548786 XAGE3Q8WTP9 111 aa20.48■□□□□ 0.87
DDX54-205ENST00000548786 COL11A2P13942 1736 aaPredicted RBP20.47■□□□□ 0.87
DDX54-205ENST00000548786 ERVV-1B6SEH8 477 aa20.47■□□□□ 0.87
DDX54-205ENST00000548786 H0YIN7 160 aa20.47■□□□□ 0.87
DDX54-205ENST00000548786 ARHGAP27Q6ZUM4 889 aa20.47■□□□□ 0.87
DDX54-205ENST00000548786 COPS6Q7L5N1 327 aa20.47■□□□□ 0.87
DDX54-205ENST00000548786 C8orf58Q8NAV2 365 aa20.47■□□□□ 0.87
DDX54-205ENST00000548786 CCDC27Q2M243 656 aa20.46■□□□□ 0.87
DDX54-205ENST00000548786 ZNF622Q969S3 477 aaKnown RBP eCLIP20.46■□□□□ 0.872e-6■■□□□ 14
DDX54-205ENST00000548786 BRIP1Q9BX63 1249 aa20.46■□□□□ 0.87
DDX54-205ENST00000548786 DDX21Q9NR30 783 aaKnown RBP eCLIP20.46■□□□□ 0.87
DDX54-205ENST00000548786 DLEC1Q9Y238 1755 aa20.45■□□□□ 0.86
DDX54-205ENST00000548786 PDE6BP35913 854 aa20.45■□□□□ 0.86
DDX54-205ENST00000548786 ZNF784Q8NCA9 323 aaPredicted RBP20.45■□□□□ 0.86
DDX54-205ENST00000548786 ZNF428Q96B54 188 aa20.45■□□□□ 0.86
DDX54-205ENST00000548786 UBN2Q6ZU65 1347 aa20.45■□□□□ 0.86
DDX54-205ENST00000548786 HOXB7P09629 217 aa20.44■□□□□ 0.86
DDX54-205ENST00000548786 GTF2E1P29083 439 aaPredicted RBP20.44■□□□□ 0.86
DDX54-205ENST00000548786 NUTM1Q86Y26 1132 aa20.44■□□□□ 0.86
DDX54-205ENST00000548786 TSPYL6Q8N831 410 aa20.44■□□□□ 0.86
DDX54-205ENST00000548786 ZNF219Q9P2Y4 722 aaPredicted RBP20.44■□□□□ 0.86
DDX54-205ENST00000548786 ATP10DQ9P241 1426 aa20.44■□□□□ 0.86
DDX54-205ENST00000548786 ARFGEF1Q9Y6D6 1849 aa20.43■□□□□ 0.86
DDX54-205ENST00000548786 RGL2O15211 777 aa20.43■□□□□ 0.86
DDX54-205ENST00000548786 TPTE2Q6XPS3 522 aa20.43■□□□□ 0.86
DDX54-205ENST00000548786 GIGYF2Q6Y7W6 1299 aaKnown RBP20.43■□□□□ 0.86
DDX54-205ENST00000548786 DBF4Q9UBU7 674 aaPredicted RBP20.43■□□□□ 0.86
DDX54-205ENST00000548786 TTLL6Q8N841 843 aa20.42■□□□□ 0.86
DDX54-205ENST00000548786 ABCC12Q96J65 1359 aa20.42■□□□□ 0.86
DDX54-205ENST00000548786 TCERG1O14776 1098 aaKnown RBP20.41■□□□□ 0.86
DDX54-205ENST00000548786 ERFEQ4G0M1 354 aa20.41■□□□□ 0.86
DDX54-205ENST00000548786 SUSD4Q5VX71 490 aa20.41■□□□□ 0.86
DDX54-205ENST00000548786 TNRC6CQ9HCJ0 1690 aaKnown RBP20.41■□□□□ 0.86
DDX54-205ENST00000548786 CACNA1SQ13698 1873 aa20.41■□□□□ 0.86
DDX54-205ENST00000548786 ZNF34Q8IZ26 560 aa20.4■□□□□ 0.86
DDX54-205ENST00000548786 IL16Q14005 1332 aa20.39■□□□□ 0.85
DDX54-205ENST00000548786 FANCIQ9NVI1 1328 aa20.39■□□□□ 0.85
DDX54-205ENST00000548786 ZNF526Q8TF50 670 aaPredicted RBP20.39■□□□□ 0.85
DDX54-205ENST00000548786 NYXQ9GZU5 481 aa20.39■□□□□ 0.85
DDX54-205ENST00000548786 HYPKQ9NX55 129 aa20.39■□□□□ 0.85
DDX54-205ENST00000548786 SRGNP10124 158 aa20.38■□□□□ 0.85
DDX54-205ENST00000548786 RASSF7Q02833 373 aa20.38■□□□□ 0.85
DDX54-205ENST00000548786 PHAXQ9H814 394 aaKnown RBP20.38■□□□□ 0.85
DDX54-205ENST00000548786 ANKRD36CQ5JPF3 1778 aa20.38■□□□□ 0.85
DDX54-205ENST00000548786 C21orf2O43822 256 aa20.37■□□□□ 0.85
DDX54-205ENST00000548786 NTSR2O95665 410 aa20.37■□□□□ 0.85
DDX54-205ENST00000548786 SPINK5Q9NQ38 1064 aaPredicted RBP20.37■□□□□ 0.85
DDX54-205ENST00000548786 TWISTNBQ3B726 338 aaPredicted RBP20.36■□□□□ 0.85
DDX54-205ENST00000548786 CCDC30Q5VVM6 783 aa20.36■□□□□ 0.85
DDX54-205ENST00000548786 PRPF40BQ6NWY9 871 aaKnown RBP20.36■□□□□ 0.85
DDX54-205ENST00000548786 ANKRD13DQ6ZTN6 518 aa20.36■□□□□ 0.85
DDX54-205ENST00000548786 WDR63Q8IWG1 891 aa20.36■□□□□ 0.85
DDX54-205ENST00000548786 MASTLQ96GX5 879 aa20.36■□□□□ 0.85
DDX54-205ENST00000548786 PDZRN3Q9UPQ7 1066 aa20.36■□□□□ 0.85
DDX54-205ENST00000548786 SLX4Q8IY92 1834 aa20.35■□□□□ 0.85
DDX54-205ENST00000548786 NCBP3Q53F19 620 aaKnown RBP20.35■□□□□ 0.85
DDX54-205ENST00000548786 PARP10Q53GL7 1025 aa20.35■□□□□ 0.85
DDX54-205ENST00000548786 C9orf131Q5VYM1 1079 aa20.35■□□□□ 0.85
DDX54-205ENST00000548786 STYK1Q6J9G0 422 aa20.35■□□□□ 0.85
DDX54-205ENST00000548786 PPP1R42Q7Z4L9 355 aa20.35■□□□□ 0.85
DDX54-205ENST00000548786 PLBD2Q8NHP8 589 aa20.35■□□□□ 0.85
DDX54-205ENST00000548786 UTP14AQ9BVJ6 771 aaKnown RBP20.35■□□□□ 0.85
DDX54-205ENST00000548786 ADCY9O60503 1353 aa20.34■□□□□ 0.85
DDX54-205ENST00000548786 ARFGEF2Q9Y6D5 1785 aa20.34■□□□□ 0.85
DDX54-205ENST00000548786 ATP5J2-PTCD1G3V325 749 aa20.34■□□□□ 0.85
DDX54-205ENST00000548786 NPR1P16066 1061 aa20.34■□□□□ 0.85
DDX54-205ENST00000548786 GOLGA2Q08379 1002 aa20.34■□□□□ 0.85
DDX54-205ENST00000548786 TCIRG1Q13488 830 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms