RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 SH2B1Q9NRF2 756 aaPredicted RBP11.85□□□□□ -0.51
SMARCD1-205ENST00000548573 EID1Q9Y6B2 187 aa11.85□□□□□ -0.51
SMARCD1-205ENST00000548573 SLIT1O75093 1534 aa11.84□□□□□ -0.51
SMARCD1-205ENST00000548573 KDM4AO75164 1064 aa11.84□□□□□ -0.51
SMARCD1-205ENST00000548573 HCLS1P14317 486 aaPredicted RBP11.84□□□□□ -0.51
SMARCD1-205ENST00000548573 CASTP20810 708 aaKnown RBP11.84□□□□□ -0.51
SMARCD1-205ENST00000548573 EIF4A1P60842 406 aaKnown RBP11.84□□□□□ -0.51
SMARCD1-205ENST00000548573 HMGN5P82970 282 aaKnown RBP11.84□□□□□ -0.51
SMARCD1-205ENST00000548573 KDM3BQ7LBC6 1761 aa11.84□□□□□ -0.51
SMARCD1-205ENST00000548573 KIF13AQ9H1H9 1805 aa11.84□□□□□ -0.51
SMARCD1-205ENST00000548573 NOLC1Q14978 699 aaKnown RBP eCLIP11.83□□□□□ -0.51
SMARCD1-205ENST00000548573 ZSWIM6Q9HCJ5 1215 aa11.83□□□□□ -0.51
SMARCD1-205ENST00000548573 DIAPH3Q9NSV4 1193 aa11.83□□□□□ -0.51
SMARCD1-205ENST00000548573 ARHGAP23Q9P227 1491 aa11.83□□□□□ -0.52
SMARCD1-205ENST00000548573 GJB2P29033 226 aa11.83□□□□□ -0.52
SMARCD1-205ENST00000548573 SPTLC3Q9NUV7 552 aa11.83□□□□□ -0.52
SMARCD1-205ENST00000548573 SPG7Q9UQ90 795 aa11.83□□□□□ -0.52
SMARCD1-205ENST00000548573 MTMR6Q9Y217 621 aa11.83□□□□□ -0.52
SMARCD1-205ENST00000548573 PI4KAP2A4QPH2 592 aa11.82□□□□□ -0.52
SMARCD1-205ENST00000548573 FIBPO43427 364 aa11.82□□□□□ -0.52
SMARCD1-205ENST00000548573 GTF2F1P35269 517 aaKnown RBP eCLIP11.82□□□□□ -0.52
SMARCD1-205ENST00000548573 DNTTIP2Q5QJE6 756 aaKnown RBP11.82□□□□□ -0.52
SMARCD1-205ENST00000548573 CLASRPQ8N2M8 674 aaKnown RBP11.82□□□□□ -0.52
SMARCD1-205ENST00000548573 PI4KAP1Q8N8J0 262 aa11.82□□□□□ -0.52
SMARCD1-205ENST00000548573 ECHDC1Q9NTX5 307 aa11.82□□□□□ -0.52
SMARCD1-205ENST00000548573 PDRG1Q9NUG6 133 aa11.82□□□□□ -0.52
SMARCD1-205ENST00000548573 CYP46A1Q9Y6A2 500 aa11.82□□□□□ -0.52
SMARCD1-205ENST00000548573 LARGE1O95461 756 aa11.82□□□□□ -0.52
SMARCD1-205ENST00000548573 TPM3P06753 285 aa11.82□□□□□ -0.52
SMARCD1-205ENST00000548573 EIF2S2P20042 333 aaKnown RBP11.82□□□□□ -0.52
SMARCD1-205ENST00000548573 ERC1Q8IUD2 1116 aa11.82□□□□□ -0.52
SMARCD1-205ENST00000548573 GPATCH3Q96I76 525 aa11.82□□□□□ -0.52
SMARCD1-205ENST00000548573 CHPF2Q9P2E5 772 aa11.82□□□□□ -0.52
SMARCD1-205ENST00000548573 CHD2O14647 1828 aaKnown RBP11.81□□□□□ -0.52
SMARCD1-205ENST00000548573 OS9Q13438 667 aaPredicted RBP11.81□□□□□ -0.52
SMARCD1-205ENST00000548573 NECTIN1Q15223 517 aa11.81□□□□□ -0.52
SMARCD1-205ENST00000548573 CCDC83Q8IWF9 413 aa11.81□□□□□ -0.52
SMARCD1-205ENST00000548573 EVI5LQ96CN4 794 aa11.81□□□□□ -0.52
SMARCD1-205ENST00000548573 JAKMIP1Q96N16 626 aaKnown RBP11.81□□□□□ -0.52
SMARCD1-205ENST00000548573 LARP6Q9BRS8 491 aaKnown RBP11.81□□□□□ -0.52
SMARCD1-205ENST00000548573 HDAC5Q9UQL6 1122 aa11.81□□□□□ -0.52
SMARCD1-205ENST00000548573 ADCY9O60503 1353 aa11.81□□□□□ -0.52
SMARCD1-205ENST00000548573 ALDH1L1O75891 902 aa11.8□□□□□ -0.52
SMARCD1-205ENST00000548573 PTH1RQ03431 593 aa11.8□□□□□ -0.52
SMARCD1-205ENST00000548573 DNM1Q05193 864 aaKnown RBP11.8□□□□□ -0.52
SMARCD1-205ENST00000548573 PLPPR3Q6T4P5 718 aa11.8□□□□□ -0.52
SMARCD1-205ENST00000548573 ZNF830Q96NB3 372 aaPredicted RBP11.8□□□□□ -0.52
SMARCD1-205ENST00000548573 TTC12Q9H892 705 aaPredicted RBP11.8□□□□□ -0.52
SMARCD1-205ENST00000548573 HIP1O00291 1037 aa11.8□□□□□ -0.52
SMARCD1-205ENST00000548573 CPA1P15085 419 aa11.8□□□□□ -0.52
SMARCD1-205ENST00000548573 ZKSCAN1P17029 563 aaPredicted RBP11.8□□□□□ -0.52
SMARCD1-205ENST00000548573 ADCK5Q3MIX3 580 aa11.8□□□□□ -0.52
SMARCD1-205ENST00000548573 PRPF40BQ6NWY9 871 aaKnown RBP11.8□□□□□ -0.52
SMARCD1-205ENST00000548573 GIMAP6Q6P9H5 292 aa11.8□□□□□ -0.52
SMARCD1-205ENST00000548573 ABTB2Q8N961 1025 aa11.8□□□□□ -0.52
SMARCD1-205ENST00000548573 LTV1Q96GA3 475 aaPredicted RBP11.8□□□□□ -0.52
SMARCD1-205ENST00000548573 CCDC171Q6TFL3 1326 aa11.8□□□□□ -0.52
SMARCD1-205ENST00000548573 CCDC192P0DO97 292 aa11.79□□□□□ -0.52
SMARCD1-205ENST00000548573 SNRKQ9NRH2 765 aa11.79□□□□□ -0.52
SMARCD1-205ENST00000548573 ELP1O95163 1332 aa11.79□□□□□ -0.52
SMARCD1-205ENST00000548573 ADGRL3Q9HAR2 1447 aa11.79□□□□□ -0.52
SMARCD1-205ENST00000548573 LMO7Q8WWI1 1683 aa11.79□□□□□ -0.52
SMARCD1-205ENST00000548573 IFIT2P09913 472 aaKnown RBP11.79□□□□□ -0.52
SMARCD1-205ENST00000548573 ST3GAL1Q11201 340 aa11.79□□□□□ -0.52
SMARCD1-205ENST00000548573 ME3Q16798 604 aa11.79□□□□□ -0.52
SMARCD1-205ENST00000548573 IP6K1Q92551 441 aa11.79□□□□□ -0.52
SMARCD1-205ENST00000548573 DBF4Q9UBU7 674 aaPredicted RBP11.79□□□□□ -0.52
SMARCD1-205ENST00000548573 LTN1O94822 1766 aa11.78□□□□□ -0.52
SMARCD1-205ENST00000548573 PSMA5P28066 241 aa11.78□□□□□ -0.52
SMARCD1-205ENST00000548573 NUTM2GQ5VZR2 741 aa11.78□□□□□ -0.52
SMARCD1-205ENST00000548573 USHBP1Q8N6Y0 703 aa11.78□□□□□ -0.52
SMARCD1-205ENST00000548573 MAP4K1Q92918 833 aa11.78□□□□□ -0.52
SMARCD1-205ENST00000548573 LGR6Q9HBX8 967 aa11.78□□□□□ -0.52
SMARCD1-205ENST00000548573 GOLGA6L6A8MZA4 724 aa11.77□□□□□ -0.52
SMARCD1-205ENST00000548573 PDCP20941 246 aa11.77□□□□□ -0.52
SMARCD1-205ENST00000548573 KRT85P78386 507 aa11.77□□□□□ -0.52
SMARCD1-205ENST00000548573 AKAP4Q5JQC9 854 aa11.77□□□□□ -0.52
SMARCD1-205ENST00000548573 CREB3L3Q68CJ9 461 aa11.77□□□□□ -0.52
SMARCD1-205ENST00000548573 KIAA1524Q8TCG1 905 aa11.77□□□□□ -0.52
SMARCD1-205ENST00000548573 ALDH8A1Q9H2A2 487 aaPredicted RBP11.77□□□□□ -0.52
SMARCD1-205ENST00000548573 RBM8AQ9Y5S9 174 aaKnown RBP11.77□□□□□ -0.52
SMARCD1-205ENST00000548573 VPS37CA5D8V6 355 aaPredicted RBP11.77□□□□□ -0.53
SMARCD1-205ENST00000548573 BTBD11A6QL63 1104 aa11.77□□□□□ -0.53
SMARCD1-205ENST00000548573 ANKRD1Q15327 319 aa11.77□□□□□ -0.53
SMARCD1-205ENST00000548573 LARP1BQ659C4 914 aaKnown RBP11.77□□□□□ -0.53
SMARCD1-205ENST00000548573 SMAP1Q8IYB5 467 aaPredicted RBP11.77□□□□□ -0.53
SMARCD1-205ENST00000548573 MPNDQ8N594 471 aa11.77□□□□□ -0.53
SMARCD1-205ENST00000548573 CCDC94Q9BW85 323 aaPredicted RBP11.77□□□□□ -0.53
SMARCD1-205ENST00000548573 DNAJC5Q9H3Z4 198 aa11.77□□□□□ -0.53
SMARCD1-205ENST00000548573 C9orf78Q9NZ63 289 aaPredicted RBP11.77□□□□□ -0.53
SMARCD1-205ENST00000548573 TPCN1Q9ULQ1 816 aa11.77□□□□□ -0.53
SMARCD1-205ENST00000548573 OVOS2A0A0G2JMS6 1433 aa11.77□□□□□ -0.53
SMARCD1-205ENST00000548573 AP5Z1O43299 807 aa11.76□□□□□ -0.53
SMARCD1-205ENST00000548573 KCNQ3O43525 872 aa11.76□□□□□ -0.53
SMARCD1-205ENST00000548573 TEFQ10587 303 aa11.76□□□□□ -0.53
SMARCD1-205ENST00000548573 NBPF6Q5VWK0 638 aa11.76□□□□□ -0.53
SMARCD1-205ENST00000548573 KSR2Q6VAB6 950 aa11.76□□□□□ -0.53
SMARCD1-205ENST00000548573 FAM200AQ8TCP9 573 aa11.76□□□□□ -0.53
SMARCD1-205ENST00000548573 NBPF4Q96M43 638 aa11.76□□□□□ -0.53
SMARCD1-205ENST00000548573 NCAPD2Q15021 1401 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms