RNA–Protein interactions for RNA: ENST00000548434.1

RAPGEF3-217, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 695 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-217ENST00000548434 HLFQ16534 295 aa21.26■□□□□ 0.99
RAPGEF3-217ENST00000548434 TOMM70O94826 608 aa21.25■□□□□ 0.99
RAPGEF3-217ENST00000548434 CACNA1SQ13698 1873 aa21.25■□□□□ 0.99
RAPGEF3-217ENST00000548434 LRP10Q7Z4F1 713 aa21.25■□□□□ 0.99
RAPGEF3-217ENST00000548434 PNISRQ8TF01 805 aaKnown RBP21.25■□□□□ 0.99
RAPGEF3-217ENST00000548434 C7orf43Q8WVR3 580 aa21.25■□□□□ 0.99
RAPGEF3-217ENST00000548434 LMNB1P20700 586 aa21.24■□□□□ 0.99
RAPGEF3-217ENST00000548434 ZC3H4Q9UPT8 1303 aaKnown RBP21.24■□□□□ 0.99
RAPGEF3-217ENST00000548434 CNBD1Q8NA66 436 aa21.23■□□□□ 0.99
RAPGEF3-217ENST00000548434 TNRC6CQ9HCJ0 1690 aaKnown RBP21.23■□□□□ 0.99
RAPGEF3-217ENST00000548434 TIAM2Q8IVF5 1701 aa21.22■□□□□ 0.99
RAPGEF3-217ENST00000548434 TMPOP42166 694 aaKnown RBP21.22■□□□□ 0.99
RAPGEF3-217ENST00000548434 STYK1Q6J9G0 422 aa21.22■□□□□ 0.99
RAPGEF3-217ENST00000548434 PNNQ9H307 717 aaKnown RBP21.22■□□□□ 0.99
RAPGEF3-217ENST00000548434 POTECB2RU33 542 aa21.2■□□□□ 0.98
RAPGEF3-217ENST00000548434 ERVV-1B6SEH8 477 aa21.2■□□□□ 0.98
RAPGEF3-217ENST00000548434 C21orf2O43822 256 aa21.2■□□□□ 0.98
RAPGEF3-217ENST00000548434 PDIA6Q15084 440 aa21.2■□□□□ 0.98
RAPGEF3-217ENST00000548434 TTLL7Q6ZT98 887 aa21.2■□□□□ 0.98
RAPGEF3-217ENST00000548434 ZNF622Q969S3 477 aaKnown RBP eCLIP21.2■□□□□ 0.98
RAPGEF3-217ENST00000548434 MYBBP1AQ9BQG0 1328 aaKnown RBP21.2■□□□□ 0.98
RAPGEF3-217ENST00000548434 LTBP3Q9NS15 1303 aa21.2■□□□□ 0.98
RAPGEF3-217ENST00000548434 RIPK4P57078 832 aa21.19■□□□□ 0.98
RAPGEF3-217ENST00000548434 DNAJC5GQ8N7S2 189 aa21.19■□□□□ 0.98
RAPGEF3-217ENST00000548434 RBM46Q8TBY0 533 aaKnown RBP21.19■□□□□ 0.98
RAPGEF3-217ENST00000548434 BABAM1Q9NWV8 329 aa21.19■□□□□ 0.98
RAPGEF3-217ENST00000548434 GLTPD2A6NH11 291 aa21.18■□□□□ 0.98
RAPGEF3-217ENST00000548434 NEFMP07197 916 aa21.18■□□□□ 0.98
RAPGEF3-217ENST00000548434 NPM2Q86SE8 214 aaKnown RBP21.18■□□□□ 0.98
RAPGEF3-217ENST00000548434 NBPF5PQ86XG9 351 aaPredicted RBP21.18■□□□□ 0.98
RAPGEF3-217ENST00000548434 CNKSR1Q969H4 720 aa21.18■□□□□ 0.98
RAPGEF3-217ENST00000548434 MASTLQ96GX5 879 aa21.18■□□□□ 0.98
RAPGEF3-217ENST00000548434 RRAGCQ9HB90 399 aa21.18■□□□□ 0.98
RAPGEF3-217ENST00000548434 NIP7Q9Y221 180 aaKnown RBP eCLIP21.18■□□□□ 0.98
RAPGEF3-217ENST00000548434 ZNF652Q9Y2D9 606 aa21.18■□□□□ 0.98
RAPGEF3-217ENST00000548434 SNED1Q8TER0 1413 aa21.18■□□□□ 0.98
RAPGEF3-217ENST00000548434 ST5P78524 1137 aa21.17■□□□□ 0.98
RAPGEF3-217ENST00000548434 PRPF40BQ6NWY9 871 aaKnown RBP21.17■□□□□ 0.98
RAPGEF3-217ENST00000548434 TRIM35Q9UPQ4 493 aa21.17■□□□□ 0.98
RAPGEF3-217ENST00000548434 MAP3K15Q6ZN16 1313 aa21.17■□□□□ 0.98
RAPGEF3-217ENST00000548434 KDM2BQ8NHM5 1336 aa21.17■□□□□ 0.98
RAPGEF3-217ENST00000548434 MAPK8IP3Q9UPT6 1336 aa21.17■□□□□ 0.98
RAPGEF3-217ENST00000548434 WDR90Q96KV7 1748 aa21.17■□□□□ 0.98
RAPGEF3-217ENST00000548434 TPTE2Q6XPS3 522 aa21.16■□□□□ 0.98
RAPGEF3-217ENST00000548434 PCNTO95613 3336 aa21.16■□□□□ 0.98
RAPGEF3-217ENST00000548434 ERBB4Q15303 1308 aa21.15■□□□□ 0.98
RAPGEF3-217ENST00000548434 UBN2Q6ZU65 1347 aa21.15■□□□□ 0.98
RAPGEF3-217ENST00000548434 ZNF34Q8IZ26 560 aa21.15■□□□□ 0.98
RAPGEF3-217ENST00000548434 CHL1O00533 1208 aa21.14■□□□□ 0.97
RAPGEF3-217ENST00000548434 NPR1P16066 1061 aa21.14■□□□□ 0.97
RAPGEF3-217ENST00000548434 CRY2Q49AN0 593 aa21.14■□□□□ 0.97
RAPGEF3-217ENST00000548434 PRKRIP1Q9H875 184 aaPredicted RBP21.14■□□□□ 0.97
RAPGEF3-217ENST00000548434 RRP7AQ9Y3A4 280 aaKnown RBP21.14■□□□□ 0.97
RAPGEF3-217ENST00000548434 ABCC12Q96J65 1359 aa21.13■□□□□ 0.97
RAPGEF3-217ENST00000548434 PROSER3Q2NL68 480 aa21.13■□□□□ 0.97
RAPGEF3-217ENST00000548434 ZNF219Q9P2Y4 722 aaPredicted RBP21.13■□□□□ 0.97
RAPGEF3-217ENST00000548434 TSPYL4Q9UJ04 414 aa21.13■□□□□ 0.97
RAPGEF3-217ENST00000548434 ADAMTS8Q9UP79 889 aa21.13■□□□□ 0.97
RAPGEF3-217ENST00000548434 RIC1Q4ADV7 1423 aa21.12■□□□□ 0.97
RAPGEF3-217ENST00000548434 IBTKQ9P2D0 1353 aaPredicted RBP21.12■□□□□ 0.97
RAPGEF3-217ENST00000548434 FSTL1Q12841 308 aa21.12■□□□□ 0.97
RAPGEF3-217ENST00000548434 NGEFQ8N5V2 710 aa21.12■□□□□ 0.97
RAPGEF3-217ENST00000548434 MYL6BP14649 208 aa21.11■□□□□ 0.97
RAPGEF3-217ENST00000548434 APLP1P51693 650 aa21.11■□□□□ 0.97
RAPGEF3-217ENST00000548434 GIGYF2Q6Y7W6 1299 aaKnown RBP21.11■□□□□ 0.97
RAPGEF3-217ENST00000548434 CCDC146Q8IYE0 955 aa21.11■□□□□ 0.97
RAPGEF3-217ENST00000548434 SUSD4Q5VX71 490 aa21.1■□□□□ 0.97
RAPGEF3-217ENST00000548434 OLFM4Q6UX06 510 aa21.1■□□□□ 0.97
RAPGEF3-217ENST00000548434 RUNDC1Q96C34 613 aa21.1■□□□□ 0.97
RAPGEF3-217ENST00000548434 NTSR2O95665 410 aa21.09■□□□□ 0.97
RAPGEF3-217ENST00000548434 HOXA10P31260 410 aaPredicted RBP21.09■□□□□ 0.97
RAPGEF3-217ENST00000548434 KRT24Q2M2I5 525 aa21.09■□□□□ 0.97
RAPGEF3-217ENST00000548434 ERFEQ4G0M1 354 aa21.09■□□□□ 0.97
RAPGEF3-217ENST00000548434 NUTM1Q86Y26 1132 aa21.09■□□□□ 0.97
RAPGEF3-217ENST00000548434 TAOK3Q9H2K8 898 aa21.09■□□□□ 0.97
RAPGEF3-217ENST00000548434 FAM177BA6PVY3 158 aa21.08■□□□□ 0.97
RAPGEF3-217ENST00000548434 VEGFAP15692 232 aaPredicted RBP21.08■□□□□ 0.97
RAPGEF3-217ENST00000548434 SOGA3Q5TF21 947 aa21.08■□□□□ 0.97
RAPGEF3-217ENST00000548434 ZBTB3Q9H5J0 574 aa21.08■□□□□ 0.97
RAPGEF3-217ENST00000548434 ANKRD36CQ5JPF3 1778 aa21.08■□□□□ 0.96
RAPGEF3-217ENST00000548434 ANXA1P04083 346 aa21.07■□□□□ 0.96
RAPGEF3-217ENST00000548434 LMOD3Q0VAK6 560 aa21.07■□□□□ 0.96
RAPGEF3-217ENST00000548434 C3orf67Q6ZVT6 689 aa21.07■□□□□ 0.96
RAPGEF3-217ENST00000548434 NYXQ9GZU5 481 aa21.07■□□□□ 0.96
RAPGEF3-217ENST00000548434 NPHP1O15259 732 aa21.06■□□□□ 0.96
RAPGEF3-217ENST00000548434 ZNF853P0CG23 659 aa21.05■□□□□ 0.96
RAPGEF3-217ENST00000548434 EIF2S2P20042 333 aaKnown RBP21.05■□□□□ 0.96
RAPGEF3-217ENST00000548434 GPTP24298 496 aa21.05■□□□□ 0.96
RAPGEF3-217ENST00000548434 FKBP4Q02790 459 aaKnown RBP eCLIP21.05■□□□□ 0.96
RAPGEF3-217ENST00000548434 CCDC93Q567U6 631 aa21.05■□□□□ 0.96
RAPGEF3-217ENST00000548434 SLC10A5Q5PT55 438 aa21.05■□□□□ 0.96
RAPGEF3-217ENST00000548434 KIF6Q6ZMV9 814 aa21.05■□□□□ 0.96
RAPGEF3-217ENST00000548434 SLC51AQ86UW1 340 aa21.05■□□□□ 0.96
RAPGEF3-217ENST00000548434 LAMB2P55268 1798 aa21.05■□□□□ 0.96
RAPGEF3-217ENST00000548434 ALDH1B1P30837 517 aa21.04■□□□□ 0.96
RAPGEF3-217ENST00000548434 HTRA3P83110 453 aa21.04■□□□□ 0.96
RAPGEF3-217ENST00000548434 NEUROD2Q15784 382 aa21.04■□□□□ 0.96
RAPGEF3-217ENST00000548434 COL4A5P29400 1685 aa21.04■□□□□ 0.96
RAPGEF3-217ENST00000548434 DDNO94850 711 aaPredicted RBP21.03■□□□□ 0.96
RAPGEF3-217ENST00000548434 C16orf71Q8IYS4 520 aaPredicted RBP21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms