RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 ZNF277Q9NRM2 450 aaPredicted RBP19.39■□□□□ 0.69
PTCH1-217ENST00000548420 FXR1P51114 621 aaKnown RBP eCLIP19.38■□□□□ 0.69
PTCH1-217ENST00000548420 ARFGEF2Q9Y6D5 1785 aa19.37■□□□□ 0.69
PTCH1-217ENST00000548420 COL15A1P39059 1388 aa19.37■□□□□ 0.69
PTCH1-217ENST00000548420 FZD9O00144 591 aa19.37■□□□□ 0.69
PTCH1-217ENST00000548420 PDE6BP35913 854 aa19.37■□□□□ 0.69
PTCH1-217ENST00000548420 PRR5LQ6MZQ0 368 aa19.37■□□□□ 0.69
PTCH1-217ENST00000548420 OLFM4Q6UX06 510 aa19.36■□□□□ 0.69
PTCH1-217ENST00000548420 NFATC2IPQ8NCF5 419 aa19.36■□□□□ 0.69
PTCH1-217ENST00000548420 CYP19A1P11511 503 aaPredicted RBP19.35■□□□□ 0.69
PTCH1-217ENST00000548420 CNKSR1Q969H4 720 aa19.35■□□□□ 0.69
PTCH1-217ENST00000548420 PDZRN3Q9UPQ7 1066 aa19.35■□□□□ 0.69
PTCH1-217ENST00000548420 ZBTB1Q9Y2K1 713 aa19.35■□□□□ 0.69
PTCH1-217ENST00000548420 DLL1O00548 723 aa19.34■□□□□ 0.69
PTCH1-217ENST00000548420 SRGNP10124 158 aa19.34■□□□□ 0.69
PTCH1-217ENST00000548420 EPS15P42566 896 aa19.34■□□□□ 0.69
PTCH1-217ENST00000548420 TBC1D9BQ66K14 1250 aa19.34■□□□□ 0.69
PTCH1-217ENST00000548420 NBPF15Q8N660 670 aa19.34■□□□□ 0.69
PTCH1-217ENST00000548420 FKBP4Q02790 459 aaKnown RBP eCLIP19.33■□□□□ 0.68
PTCH1-217ENST00000548420 STYK1Q6J9G0 422 aa19.33■□□□□ 0.68
PTCH1-217ENST00000548420 GPC2Q8N158 579 aa19.33■□□□□ 0.68
PTCH1-217ENST00000548420 WASHC2AQ641Q2 1341 aa19.32■□□□□ 0.68
PTCH1-217ENST00000548420 PPM1GO15355 546 aaPredicted RBP19.32■□□□□ 0.68
PTCH1-217ENST00000548420 SOGA3Q5TF21 947 aa19.32■□□□□ 0.68
PTCH1-217ENST00000548420 HHIPL1Q96JK4 782 aa19.32■□□□□ 0.68
PTCH1-217ENST00000548420 ANKRD26Q9UPS8 1709 aa19.31■□□□□ 0.68
PTCH1-217ENST00000548420 HSP90AB1P08238 724 aaKnown RBP19.31■□□□□ 0.68
PTCH1-217ENST00000548420 SCNN1DP51172 638 aa19.31■□□□□ 0.68
PTCH1-217ENST00000548420 COL4A5P29400 1685 aa19.3■□□□□ 0.68
PTCH1-217ENST00000548420 CELF2O95319 508 aaKnown RBP19.3■□□□□ 0.68
PTCH1-217ENST00000548420 CCDC93Q567U6 631 aa19.3■□□□□ 0.68
PTCH1-217ENST00000548420 HPS5Q9UPZ3 1129 aa19.3■□□□□ 0.68
PTCH1-217ENST00000548420 MKI67P46013 3256 aaKnown RBP19.3■□□□□ 0.68
PTCH1-217ENST00000548420 KIF20BQ96Q89 1820 aa19.3■□□□□ 0.68
PTCH1-217ENST00000548420 MASTLQ96GX5 879 aa19.28■□□□□ 0.68
PTCH1-217ENST00000548420 IARSP41252 1262 aaKnown RBP19.27■□□□□ 0.68
PTCH1-217ENST00000548420 MTHFSP49914 203 aa19.27■□□□□ 0.68
PTCH1-217ENST00000548420 CDCA8Q53HL2 280 aa19.27■□□□□ 0.68
PTCH1-217ENST00000548420 ZNF530Q6P9A1 599 aaPredicted RBP19.27■□□□□ 0.68
PTCH1-217ENST00000548420 GJA3Q9Y6H8 435 aa19.27■□□□□ 0.68
PTCH1-217ENST00000548420 SZT2Q5T011 3432 aa19.26■□□□□ 0.67
PTCH1-217ENST00000548420 CTU1Q7Z7A3 348 aaKnown RBP19.26■□□□□ 0.67
PTCH1-217ENST00000548420 SCN11AQ9UI33 1791 aa19.26■□□□□ 0.67
PTCH1-217ENST00000548420 EIF4G2P78344 907 aaKnown RBP eCLIP19.25■□□□□ 0.67
PTCH1-217ENST00000548420 NOGQ13253 232 aa19.25■□□□□ 0.67
PTCH1-217ENST00000548420 EIF4A2Q14240 407 aaKnown RBP19.25■□□□□ 0.67
PTCH1-217ENST00000548420 USP50Q70EL3 339 aaPredicted RBP19.25■□□□□ 0.67
PTCH1-217ENST00000548420 SYNE4Q8N205 404 aa19.25■□□□□ 0.67
PTCH1-217ENST00000548420 GLIS2Q9BZE0 524 aaPredicted RBP19.25■□□□□ 0.67
PTCH1-217ENST00000548420 BCORQ6W2J9 1755 aa19.24■□□□□ 0.67
PTCH1-217ENST00000548420 CANXP27824 592 aaKnown RBP19.24■□□□□ 0.67
PTCH1-217ENST00000548420 RNF186Q9NXI6 227 aa19.24■□□□□ 0.67
PTCH1-217ENST00000548420 CUL9Q8IWT3 2517 aa19.23■□□□□ 0.67
PTCH1-217ENST00000548420 FAM155AB1AL88 458 aaPredicted RBP19.23■□□□□ 0.67
PTCH1-217ENST00000548420 TRPA1O75762 1119 aa19.23■□□□□ 0.67
PTCH1-217ENST00000548420 LMOD1P29536 600 aaPredicted RBP19.23■□□□□ 0.67
PTCH1-217ENST00000548420 EIF5P55010 431 aaKnown RBP19.23■□□□□ 0.67
PTCH1-217ENST00000548420 PLEKHO1Q53GL0 409 aaPredicted RBP19.23■□□□□ 0.67
PTCH1-217ENST00000548420 SAGE1Q9NXZ1 904 aa19.23■□□□□ 0.67
PTCH1-217ENST00000548420 SNED1Q8TER0 1413 aa19.23■□□□□ 0.67
PTCH1-217ENST00000548420 A0A0C4DFX4 3053 aa19.22■□□□□ 0.67
PTCH1-217ENST00000548420 HSPA5P11021 654 aaKnown RBP19.22■□□□□ 0.67
PTCH1-217ENST00000548420 SLC39A6Q13433 755 aa19.22■□□□□ 0.67
PTCH1-217ENST00000548420 SCN7AQ01118 1682 aa19.2■□□□□ 0.66
PTCH1-217ENST00000548420 CNBD1Q8NA66 436 aa19.2■□□□□ 0.66
PTCH1-217ENST00000548420 ZNF408Q9H9D4 720 aa19.2■□□□□ 0.66
PTCH1-217ENST00000548420 POLKQ9UBT6 870 aa19.2■□□□□ 0.66
PTCH1-217ENST00000548420 KIF23Q02241 960 aaPredicted RBP19.19■□□□□ 0.66
PTCH1-217ENST00000548420 DLK2Q6UY11 383 aa19.19■□□□□ 0.66
PTCH1-217ENST00000548420 RTKN2Q8IZC4 609 aa19.19■□□□□ 0.66
PTCH1-217ENST00000548420 CARD14Q9BXL6 1004 aa19.19■□□□□ 0.66
PTCH1-217ENST00000548420 TBC1D2BQ9UPU7 963 aa19.19■□□□□ 0.66
PTCH1-217ENST00000548420 EIF6P56537 245 aaKnown RBP19.18■□□□□ 0.66
PTCH1-217ENST00000548420 AKAP11Q9UKA4 1901 aa19.17■□□□□ 0.66
PTCH1-217ENST00000548420 AKAP4Q5JQC9 854 aa19.17■□□□□ 0.66
PTCH1-217ENST00000548420 JDP2Q8WYK2 163 aa19.17■□□□□ 0.66
PTCH1-217ENST00000548420 PGAP2Q9UHJ9 254 aa19.17■□□□□ 0.66
PTCH1-217ENST00000548420 TRIOBPQ9H2D6 2365 aa19.17■□□□□ 0.66
PTCH1-217ENST00000548420 NPR1P16066 1061 aa19.16■□□□□ 0.66
PTCH1-217ENST00000548420 HUNKP57058 714 aa19.16■□□□□ 0.66
PTCH1-217ENST00000548420 AMOTQ4VCS5 1084 aa19.16■□□□□ 0.66
PTCH1-217ENST00000548420 KLRG2A4D1S0 409 aaPredicted RBP19.15■□□□□ 0.66
PTCH1-217ENST00000548420 ST5P78524 1137 aa19.15■□□□□ 0.66
PTCH1-217ENST00000548420 LGR6Q9HBX8 967 aa19.15■□□□□ 0.66
PTCH1-217ENST00000548420 HIRAP54198 1017 aaPredicted RBP19.14■□□□□ 0.65
PTCH1-217ENST00000548420 C1orf141Q5JVX7 400 aa19.14■□□□□ 0.65
PTCH1-217ENST00000548420 SLC51AQ86UW1 340 aa19.14■□□□□ 0.65
PTCH1-217ENST00000548420 AEBP1Q8IUX7 1158 aa19.14■□□□□ 0.65
PTCH1-217ENST00000548420 SLC17A8Q8NDX2 589 aa19.14■□□□□ 0.65
PTCH1-217ENST00000548420 SETDB2Q96T68 719 aa19.14■□□□□ 0.65
PTCH1-217ENST00000548420 PSMD1Q99460 953 aa19.14■□□□□ 0.65
PTCH1-217ENST00000548420 SLC52A2Q9HAB3 445 aa19.14■□□□□ 0.65
PTCH1-217ENST00000548420 ADARB2Q9NS39 739 aaKnown RBP19.14■□□□□ 0.65
PTCH1-217ENST00000548420 GPRC5DQ9NZD1 345 aa19.14■□□□□ 0.65
PTCH1-217ENST00000548420 COLQQ9Y215 455 aaPredicted RBP19.14■□□□□ 0.65
PTCH1-217ENST00000548420 A0A087WZG4 1122 aa19.13■□□□□ 0.65
PTCH1-217ENST00000548420 RGMBQ6NW40 437 aa19.13■□□□□ 0.65
PTCH1-217ENST00000548420 CSRNP1Q96S65 589 aa19.13■□□□□ 0.65
PTCH1-217ENST00000548420 CAMTA2O94983 1202 aa19.12■□□□□ 0.65
PTCH1-217ENST00000548420 NPHP1O15259 732 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms