RNA–Protein interactions for RNA: ENST00000548363.1

TUBA1A-205, Transcript of tubulin alpha 1a, humanhuman

TSL 2

Gene TUBA1A, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-205ENST00000548363 AMIGO3Q86WK7 504 aa11.38□□□□□ -0.59
TUBA1A-205ENST00000548363 NFATC2IPQ8NCF5 419 aa11.38□□□□□ -0.59
TUBA1A-205ENST00000548363 BRCA1P38398 1863 aaKnown RBP11.38□□□□□ -0.59
TUBA1A-205ENST00000548363 MRC1P22897 1456 aa11.38□□□□□ -0.59
TUBA1A-205ENST00000548363 FXR1P51114 621 aaKnown RBP eCLIP11.37□□□□□ -0.59
TUBA1A-205ENST00000548363 MTHFSDQ2M296 383 aaKnown RBP11.37□□□□□ -0.59
TUBA1A-205ENST00000548363 DPY19L2Q6NUT2 758 aa11.37□□□□□ -0.59
TUBA1A-205ENST00000548363 NBPF15Q8N660 670 aa11.37□□□□□ -0.59
TUBA1A-205ENST00000548363 SIPA1L3O60292 1781 aaPredicted RBP11.36□□□□□ -0.59
TUBA1A-205ENST00000548363 C4AP0C0L4 1744 aa11.36□□□□□ -0.59
TUBA1A-205ENST00000548363 GNPATO15228 680 aa11.36□□□□□ -0.59
TUBA1A-205ENST00000548363 PTCD1O75127 700 aaKnown RBP11.36□□□□□ -0.59
TUBA1A-205ENST00000548363 POTEJP0CG39 1038 aa11.36□□□□□ -0.59
TUBA1A-205ENST00000548363 LMNB1P20700 586 aa11.36□□□□□ -0.59
TUBA1A-205ENST00000548363 SLC4A9Q96Q91 983 aa11.36□□□□□ -0.59
TUBA1A-205ENST00000548363 LGR6Q9HBX8 967 aa11.36□□□□□ -0.59
TUBA1A-205ENST00000548363 TSKSQ9UJT2 592 aa11.36□□□□□ -0.59
TUBA1A-205ENST00000548363 UBR2Q8IWV8 1755 aa11.36□□□□□ -0.59
TUBA1A-205ENST00000548363 RNMTO43148 476 aaKnown RBP11.35□□□□□ -0.59
TUBA1A-205ENST00000548363 SSFA2P28290 1259 aa11.35□□□□□ -0.59
TUBA1A-205ENST00000548363 SLC52A2Q9HAB3 445 aa11.35□□□□□ -0.59
TUBA1A-205ENST00000548363 NUDCQ9Y266 331 aa11.35□□□□□ -0.59
TUBA1A-205ENST00000548363 ITGBL1O95965 494 aaPredicted RBP11.34□□□□□ -0.59
TUBA1A-205ENST00000548363 FAM163AQ96GL9 167 aaPredicted RBP11.34□□□□□ -0.59
TUBA1A-205ENST00000548363 RSPH6AQ9H0K4 717 aa11.34□□□□□ -0.59
TUBA1A-205ENST00000548363 CCDC87Q9NVE4 849 aa11.34□□□□□ -0.59
TUBA1A-205ENST00000548363 DLG5Q8TDM6 1919 aa11.33□□□□□ -0.6
TUBA1A-205ENST00000548363 U2AF1L5P0DN76 240 aaPredicted RBP11.33□□□□□ -0.6
TUBA1A-205ENST00000548363 PRKAR2BP31323 418 aa11.33□□□□□ -0.6
TUBA1A-205ENST00000548363 U2AF1Q01081 240 aaKnown RBP eCLIP11.33□□□□□ -0.6
TUBA1A-205ENST00000548363 GAS2L2Q8NHY3 880 aa11.33□□□□□ -0.6
TUBA1A-205ENST00000548363 RTCBQ9Y3I0 505 aaKnown RBP11.33□□□□□ -0.6
TUBA1A-205ENST00000548363 CNTNAP4Q9C0A0 1308 aa11.33□□□□□ -0.6
TUBA1A-205ENST00000548363 GNAT3A8MTJ3 354 aa11.32□□□□□ -0.6
TUBA1A-205ENST00000548363 RASSF7Q02833 373 aa11.32□□□□□ -0.6
TUBA1A-205ENST00000548363 SLC39A6Q13433 755 aa11.32□□□□□ -0.6
TUBA1A-205ENST00000548363 RC3H1Q5TC82 1133 aaKnown RBP11.32□□□□□ -0.6
TUBA1A-205ENST00000548363 METRNQ9UJH8 293 aa11.32□□□□□ -0.6
TUBA1A-205ENST00000548363 A0A0C4DFX4 3053 aa11.32□□□□□ -0.6
TUBA1A-205ENST00000548363 CA12O43570 354 aa11.31□□□□□ -0.6
TUBA1A-205ENST00000548363 DDX10Q13206 875 aaKnown RBP11.31□□□□□ -0.6
TUBA1A-205ENST00000548363 MAMSTRQ6ZN01 415 aa11.31□□□□□ -0.6
TUBA1A-205ENST00000548363 LDHDQ86WU2 507 aa11.31□□□□□ -0.6
TUBA1A-205ENST00000548363 NLGN1Q8N2Q7 840 aa11.31□□□□□ -0.6
TUBA1A-205ENST00000548363 PHACTR3Q96KR7 559 aa11.31□□□□□ -0.6
TUBA1A-205ENST00000548363 GPR101Q96P66 508 aaPredicted RBP11.31□□□□□ -0.6
TUBA1A-205ENST00000548363 ECE1P42892 770 aa11.3□□□□□ -0.6
TUBA1A-205ENST00000548363 CRKLP46109 303 aaKnown RBP11.3□□□□□ -0.6
TUBA1A-205ENST00000548363 TEFQ10587 303 aa11.3□□□□□ -0.6
TUBA1A-205ENST00000548363 TRAPPC3LQ5T215 181 aa11.3□□□□□ -0.6
TUBA1A-205ENST00000548363 ABT1Q9ULW3 272 aaKnown RBP11.3□□□□□ -0.6
TUBA1A-205ENST00000548363 RPS6KA4O75676 772 aa11.29□□□□□ -0.6
TUBA1A-205ENST00000548363 DNAJC10Q8IXB1 793 aa11.29□□□□□ -0.6
TUBA1A-205ENST00000548363 IL17REQ8NFR9 667 aa11.29□□□□□ -0.6
TUBA1A-205ENST00000548363 ARHGEF1Q92888 912 aaKnown RBP11.29□□□□□ -0.6
TUBA1A-205ENST00000548363 CAPNS2Q96L46 248 aa11.29□□□□□ -0.6
TUBA1A-205ENST00000548363 RFC4P35249 363 aa11.28□□□□□ -0.6
TUBA1A-205ENST00000548363 TTC5Q8N0Z6 440 aa11.28□□□□□ -0.6
TUBA1A-205ENST00000548363 CEMIPQ8WUJ3 1361 aa11.28□□□□□ -0.6
TUBA1A-205ENST00000548363 MAP2K2P36507 400 aa11.27□□□□□ -0.61
TUBA1A-205ENST00000548363 RALBP1Q15311 655 aa11.27□□□□□ -0.61
TUBA1A-205ENST00000548363 INTS5Q6P9B9 1019 aaKnown RBP11.27□□□□□ -0.61
TUBA1A-205ENST00000548363 SLC39A7Q92504 469 aa11.27□□□□□ -0.61
TUBA1A-205ENST00000548363 PARP3Q9Y6F1 533 aa11.27□□□□□ -0.61
TUBA1A-205ENST00000548363 CCDC88AQ3V6T2 1871 aa11.27□□□□□ -0.61
TUBA1A-205ENST00000548363 C7P10643 843 aa11.26□□□□□ -0.61
TUBA1A-205ENST00000548363 CYP19A1P11511 503 aaPredicted RBP11.26□□□□□ -0.61
TUBA1A-205ENST00000548363 GYS1P13807 737 aa11.26□□□□□ -0.61
TUBA1A-205ENST00000548363 ZNF790Q6PG37 636 aa11.26□□□□□ -0.61
TUBA1A-205ENST00000548363 RTF1Q92541 710 aaKnown RBP11.26□□□□□ -0.61
TUBA1A-205ENST00000548363 NEFMP07197 916 aa11.25□□□□□ -0.61
TUBA1A-205ENST00000548363 CENPBP07199 599 aaPredicted RBP11.25□□□□□ -0.61
TUBA1A-205ENST00000548363 GRM1Q13255 1194 aa11.25□□□□□ -0.61
TUBA1A-205ENST00000548363 CYP4F22Q6NT55 531 aa11.25□□□□□ -0.61
TUBA1A-205ENST00000548363 PAXIP1Q6ZW49 1069 aaPredicted RBP11.25□□□□□ -0.61
TUBA1A-205ENST00000548363 MCM10Q7L590 875 aa11.25□□□□□ -0.61
TUBA1A-205ENST00000548363 VSIG10Q8N0Z9 540 aa11.25□□□□□ -0.61
TUBA1A-205ENST00000548363 ZNF496Q96IT1 587 aaPredicted RBP11.25□□□□□ -0.61
TUBA1A-205ENST00000548363 SRP68Q9UHB9 627 aaKnown RBP11.25□□□□□ -0.61
TUBA1A-205ENST00000548363 SOS1Q07889 1333 aaPredicted RBP11.25□□□□□ -0.61
TUBA1A-205ENST00000548363 AFDNP55196 1824 aaKnown RBP11.25□□□□□ -0.61
TUBA1A-205ENST00000548363 HEG1Q9ULI3 1381 aa11.25□□□□□ -0.61
TUBA1A-205ENST00000548363 THSD7BQ9C0I4 1608 aa11.24□□□□□ -0.61
TUBA1A-205ENST00000548363 LTBP1Q14766 1721 aa11.24□□□□□ -0.61
TUBA1A-205ENST00000548363 KDM3BQ7LBC6 1761 aa11.24□□□□□ -0.61
TUBA1A-205ENST00000548363 IQCA1LA6NCM1 817 aa11.24□□□□□ -0.61
TUBA1A-205ENST00000548363 BTBD11A6QL63 1104 aa11.24□□□□□ -0.61
TUBA1A-205ENST00000548363 CHRNA5P30532 468 aa11.24□□□□□ -0.61
TUBA1A-205ENST00000548363 DCTN1Q14203 1278 aa11.24□□□□□ -0.61
TUBA1A-205ENST00000548363 ZBTB1Q9Y2K1 713 aa11.24□□□□□ -0.61
TUBA1A-205ENST00000548363 USP42Q9H9J4 1324 aaKnown RBP11.24□□□□□ -0.61
TUBA1A-205ENST00000548363 COL15A1P39059 1388 aa11.24□□□□□ -0.61
TUBA1A-205ENST00000548363 KCNQ3O43525 872 aa11.23□□□□□ -0.61
TUBA1A-205ENST00000548363 DDNO94850 711 aaPredicted RBP11.23□□□□□ -0.61
TUBA1A-205ENST00000548363 STARD3NLO95772 234 aa11.23□□□□□ -0.61
TUBA1A-205ENST00000548363 FMNL2Q96PY5 1086 aa11.23□□□□□ -0.61
TUBA1A-205ENST00000548363 TAF1DQ9H5J8 278 aaPredicted RBP11.23□□□□□ -0.61
TUBA1A-205ENST00000548363 SCUBE2Q9NQ36 999 aa11.23□□□□□ -0.61
TUBA1A-205ENST00000548363 MYBBP1AQ9BQG0 1328 aaKnown RBP11.23□□□□□ -0.61
TUBA1A-205ENST00000548363 MAPK8IP3Q9UPT6 1336 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms