RNA–Protein interactions for RNA: ENST00000547693.5

CACNB3-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 477 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-206ENST00000547693 ARXQ96QS3 562 aa13.16□□□□□ -0.3
CACNB3-206ENST00000547693 TNNQ9UQP3 1299 aa13.16□□□□□ -0.3
CACNB3-206ENST00000547693 ZNF330Q9Y3S2 320 aaPredicted RBP13.16□□□□□ -0.3
CACNB3-206ENST00000547693 NUP188Q5SRE5 1749 aa13.16□□□□□ -0.3
CACNB3-206ENST00000547693 ZBTB7BO15156 539 aaPredicted RBP13.15□□□□□ -0.3
CACNB3-206ENST00000547693 ALDH1L1O75891 902 aa13.15□□□□□ -0.3
CACNB3-206ENST00000547693 GNAI3P08754 354 aa13.15□□□□□ -0.3
CACNB3-206ENST00000547693 ITPK1Q13572 414 aa13.15□□□□□ -0.3
CACNB3-206ENST00000547693 R3HDM1Q15032 1099 aaKnown RBP13.15□□□□□ -0.3
CACNB3-206ENST00000547693 PXDNLA1KZ92 1463 aa13.15□□□□□ -0.3
CACNB3-206ENST00000547693 CNTNAP4Q9C0A0 1308 aa13.14□□□□□ -0.31
CACNB3-206ENST00000547693 CICQ96RK0 1608 aaPredicted RBP13.14□□□□□ -0.31
CACNB3-206ENST00000547693 PIP4K2AP48426 406 aaPredicted RBP13.14□□□□□ -0.31
CACNB3-206ENST00000547693 HSP90AB3PQ58FF7 597 aa13.14□□□□□ -0.31
CACNB3-206ENST00000547693 INTS5Q6P9B9 1019 aaKnown RBP13.14□□□□□ -0.31
CACNB3-206ENST00000547693 LRP10Q7Z4F1 713 aa13.14□□□□□ -0.31
CACNB3-206ENST00000547693 LINS1Q8NG48 757 aa13.14□□□□□ -0.31
CACNB3-206ENST00000547693 METTL22Q9BUU2 404 aaPredicted RBP13.14□□□□□ -0.31
CACNB3-206ENST00000547693 TJP1Q07157 1748 aa13.13□□□□□ -0.31
CACNB3-206ENST00000547693 ERVV-1B6SEH8 477 aa13.13□□□□□ -0.31
CACNB3-206ENST00000547693 EIF5P55010 431 aaKnown RBP13.13□□□□□ -0.31
CACNB3-206ENST00000547693 BEND3Q5T5X7 828 aa13.13□□□□□ -0.31
CACNB3-206ENST00000547693 ZBTB40Q9NUA8 1239 aa13.13□□□□□ -0.31
CACNB3-206ENST00000547693 ZBTB1Q9Y2K1 713 aa13.13□□□□□ -0.31
CACNB3-206ENST00000547693 LY75O60449 1722 aa13.13□□□□□ -0.31
CACNB3-206ENST00000547693 ADCY9O60503 1353 aa13.12□□□□□ -0.31
CACNB3-206ENST00000547693 RPS6KA4O75676 772 aa13.12□□□□□ -0.31
CACNB3-206ENST00000547693 EN1Q05925 392 aaPredicted RBP13.12□□□□□ -0.31
CACNB3-206ENST00000547693 TTLL7Q6ZT98 887 aa13.12□□□□□ -0.31
CACNB3-206ENST00000547693 DZIP3Q86Y13 1208 aaKnown RBP13.12□□□□□ -0.31
CACNB3-206ENST00000547693 LINC00116Q8NCU8 138 aa13.12□□□□□ -0.31
CACNB3-206ENST00000547693 AK7Q96M32 723 aa13.12□□□□□ -0.31
CACNB3-206ENST00000547693 C9orf78Q9NZ63 289 aaPredicted RBP13.12□□□□□ -0.31
CACNB3-206ENST00000547693 RTCBQ9Y3I0 505 aaKnown RBP13.12□□□□□ -0.31
CACNB3-206ENST00000547693 ATP10DQ9P241 1426 aa13.12□□□□□ -0.31
CACNB3-206ENST00000547693 MAP3K15Q6ZN16 1313 aa13.12□□□□□ -0.31
CACNB3-206ENST00000547693 TXNRD1Q16881 649 aa13.11□□□□□ -0.31
CACNB3-206ENST00000547693 MYD88Q99836 296 aa13.11□□□□□ -0.31
CACNB3-206ENST00000547693 RWDD1Q9H446 243 aaPredicted RBP13.11□□□□□ -0.31
CACNB3-206ENST00000547693 ZNF652Q9Y2D9 606 aa13.11□□□□□ -0.31
CACNB3-206ENST00000547693 CEP350Q5VT06 3117 aa13.11□□□□□ -0.31
CACNB3-206ENST00000547693 IBTKQ9P2D0 1353 aaPredicted RBP13.1□□□□□ -0.31
CACNB3-206ENST00000547693 RGL2O15211 777 aa13.1□□□□□ -0.31
CACNB3-206ENST00000547693 GNAI2P04899 355 aa13.1□□□□□ -0.31
CACNB3-206ENST00000547693 UBTFL1P0CB47 393 aaPredicted RBP13.1□□□□□ -0.31
CACNB3-206ENST00000547693 TCIRG1Q13488 830 aa13.1□□□□□ -0.31
CACNB3-206ENST00000547693 GIGYF2Q6Y7W6 1299 aaKnown RBP13.1□□□□□ -0.31
CACNB3-206ENST00000547693 ZBTB3Q9H5J0 574 aa13.1□□□□□ -0.31
CACNB3-206ENST00000547693 GNPATO15228 680 aa13.09□□□□□ -0.31
CACNB3-206ENST00000547693 ZPR1O75312 459 aa13.09□□□□□ -0.31
CACNB3-206ENST00000547693 ADRA2BP18089 450 aa13.09□□□□□ -0.31
CACNB3-206ENST00000547693 COL5A3P25940 1745 aaPredicted RBP13.09□□□□□ -0.31
CACNB3-206ENST00000547693 TRIM28Q13263 835 aaKnown RBP13.09□□□□□ -0.31
CACNB3-206ENST00000547693 TRAPPC3LQ5T215 181 aa13.09□□□□□ -0.31
CACNB3-206ENST00000547693 CLEC4GQ6UXB4 293 aa13.09□□□□□ -0.31
CACNB3-206ENST00000547693 RPAP2Q8IXW5 612 aaPredicted RBP13.09□□□□□ -0.31
CACNB3-206ENST00000547693 CCDC191Q8NCU4 936 aa13.09□□□□□ -0.31
CACNB3-206ENST00000547693 TBC1D2BQ9UPU7 963 aa13.09□□□□□ -0.31
CACNB3-206ENST00000547693 RGPD3A6NKT7 1758 aaPredicted RBP13.09□□□□□ -0.31
CACNB3-206ENST00000547693 RGPD4Q7Z3J3 1758 aa13.09□□□□□ -0.31
CACNB3-206ENST00000547693 CHD4Q14839 1912 aa13.08□□□□□ -0.32
CACNB3-206ENST00000547693 NEURL1BA8MQ27 555 aa13.08□□□□□ -0.32
CACNB3-206ENST00000547693 KCNQ4P56696 695 aa13.08□□□□□ -0.32
CACNB3-206ENST00000547693 B4GALNT3Q6L9W6 998 aa13.08□□□□□ -0.32
CACNB3-206ENST00000547693 FLAD1Q8NFF5 587 aa13.08□□□□□ -0.32
CACNB3-206ENST00000547693 CAMKK2Q96RR4 588 aa13.08□□□□□ -0.32
CACNB3-206ENST00000547693 USP44Q9H0E7 712 aa13.08□□□□□ -0.32
CACNB3-206ENST00000547693 CWC25Q9NXE8 425 aaPredicted RBP13.08□□□□□ -0.32
CACNB3-206ENST00000547693 MYH14Q7Z406 1995 aaKnown RBP13.08□□□□□ -0.32
CACNB3-206ENST00000547693 TAF1LQ8IZX4 1826 aa13.08□□□□□ -0.32
CACNB3-206ENST00000547693 COL15A1P39059 1388 aa13.07□□□□□ -0.32
CACNB3-206ENST00000547693 GRM8O00222 908 aa13.07□□□□□ -0.32
CACNB3-206ENST00000547693 HMMRO75330 724 aa13.07□□□□□ -0.32
CACNB3-206ENST00000547693 HSP90B1P14625 803 aaKnown RBP13.07□□□□□ -0.32
CACNB3-206ENST00000547693 RFC4P35249 363 aa13.07□□□□□ -0.32
CACNB3-206ENST00000547693 GCKRQ14397 625 aa13.07□□□□□ -0.32
CACNB3-206ENST00000547693 MEIS3Q99687 375 aa13.07□□□□□ -0.32
CACNB3-206ENST00000547693 LRRC4BQ9NT99 713 aa13.07□□□□□ -0.32
CACNB3-206ENST00000547693 N4BP2Q86UW6 1770 aaPredicted RBP13.07□□□□□ -0.32
CACNB3-206ENST00000547693 ATP5J2-PTCD1G3V325 749 aa13.06□□□□□ -0.32
CACNB3-206ENST00000547693 IGKV5-2P06315 115 aa13.06□□□□□ -0.32
CACNB3-206ENST00000547693 CWF19L2Q2TBE0 894 aaKnown RBP13.06□□□□□ -0.32
CACNB3-206ENST00000547693 PARP10Q53GL7 1025 aa13.06□□□□□ -0.32
CACNB3-206ENST00000547693 CENPQQ7L2Z9 268 aaPredicted RBP13.06□□□□□ -0.32
CACNB3-206ENST00000547693 ISCA1Q9BUE6 129 aa13.06□□□□□ -0.32
CACNB3-206ENST00000547693 NARFQ9UHQ1 456 aa13.06□□□□□ -0.32
CACNB3-206ENST00000547693 ARFGEF2Q9Y6D5 1785 aa13.06□□□□□ -0.32
CACNB3-206ENST00000547693 C4BP0C0L5 1744 aa13.05□□□□□ -0.32
CACNB3-206ENST00000547693 SSFA2P28290 1259 aa13.05□□□□□ -0.32
CACNB3-206ENST00000547693 HDAC1Q13547 482 aaPredicted RBP13.05□□□□□ -0.32
CACNB3-206ENST00000547693 EZH2Q15910 746 aaKnown RBP13.05□□□□□ -0.32
CACNB3-206ENST00000547693 PROM2Q8N271 834 aa13.05□□□□□ -0.32
CACNB3-206ENST00000547693 PCDHB15Q9Y5E8 787 aa13.05□□□□□ -0.32
CACNB3-206ENST00000547693 UTYO14607 1347 aa13.05□□□□□ -0.32
CACNB3-206ENST00000547693 CASZ1Q86V15 1759 aa13.04□□□□□ -0.32
CACNB3-206ENST00000547693 CAMTA2O94983 1202 aa13.04□□□□□ -0.32
CACNB3-206ENST00000547693 HLFQ16534 295 aa13.04□□□□□ -0.32
CACNB3-206ENST00000547693 PPP1R42Q7Z4L9 355 aa13.04□□□□□ -0.32
CACNB3-206ENST00000547693 ARHGEF1Q92888 912 aaKnown RBP13.04□□□□□ -0.32
CACNB3-206ENST00000547693 TFCP2L1Q9NZI6 479 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms