RNA–Protein interactions for RNA: ENST00000547372.5

RBFOX1-208, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-208ENST00000547372 ZNF526Q8TF50 670 aaPredicted RBP14.03□□□□□ -0.16
RBFOX1-208ENST00000547372 ZSWIM4Q9H7M6 989 aa14.03□□□□□ -0.16
RBFOX1-208ENST00000547372 PTPRCP08575 1304 aa14.03□□□□□ -0.16
RBFOX1-208ENST00000547372 NRDCO43847 1150 aa14.03□□□□□ -0.16
RBFOX1-208ENST00000547372 PHACTR2O75167 634 aa14.03□□□□□ -0.16
RBFOX1-208ENST00000547372 FOSBP53539 338 aa14.03□□□□□ -0.16
RBFOX1-208ENST00000547372 AXDND1Q5T1B0 1012 aaPredicted RBP14.03□□□□□ -0.16
RBFOX1-208ENST00000547372 FMNL2Q96PY5 1086 aa14.03□□□□□ -0.16
RBFOX1-208ENST00000547372 PDRG1Q9NUG6 133 aa14.03□□□□□ -0.16
RBFOX1-208ENST00000547372 CEP83Q9Y592 693 aa14.03□□□□□ -0.16
RBFOX1-208ENST00000547372 PIK3R4Q99570 1358 aa14.03□□□□□ -0.16
RBFOX1-208ENST00000547372 SPHKAPQ2M3C7 1700 aa14.02□□□□□ -0.16
RBFOX1-208ENST00000547372 PTCH1Q13635 1447 aa14.02□□□□□ -0.17
RBFOX1-208ENST00000547372 MCM6Q14566 821 aa14.02□□□□□ -0.17
RBFOX1-208ENST00000547372 ANKRD44Q8N8A2 993 aa14.02□□□□□ -0.17
RBFOX1-208ENST00000547372 RAD50Q92878 1312 aa14.02□□□□□ -0.17
RBFOX1-208ENST00000547372 CCDC172P0C7W6 258 aa14.02□□□□□ -0.17
RBFOX1-208ENST00000547372 KRT24Q2M2I5 525 aa14.02□□□□□ -0.17
RBFOX1-208ENST00000547372 FOXR1Q6PIV2 292 aa14.02□□□□□ -0.17
RBFOX1-208ENST00000547372 VPS18Q9P253 973 aa14.02□□□□□ -0.17
RBFOX1-208ENST00000547372 ADAM21Q9UKJ8 722 aa14.02□□□□□ -0.17
RBFOX1-208ENST00000547372 TCHHQ07283 1943 aa14.01□□□□□ -0.17
RBFOX1-208ENST00000547372 ZNF622Q969S3 477 aaKnown RBP eCLIP14.01□□□□□ -0.17
RBFOX1-208ENST00000547372 ESYT1Q9BSJ8 1104 aa14.01□□□□□ -0.17
RBFOX1-208ENST00000547372 IL1RAPL2Q9NP60 686 aa14.01□□□□□ -0.17
RBFOX1-208ENST00000547372 GJB2P29033 226 aa14.01□□□□□ -0.17
RBFOX1-208ENST00000547372 MNAT1P51948 309 aa14.01□□□□□ -0.17
RBFOX1-208ENST00000547372 RNF20Q5VTR2 975 aa14.01□□□□□ -0.17
RBFOX1-208ENST00000547372 FBXO18Q8NFZ0 1043 aa14.01□□□□□ -0.17
RBFOX1-208ENST00000547372 FAM53CQ9NYF3 392 aa14.01□□□□□ -0.17
RBFOX1-208ENST00000547372 RPAP1Q9BWH6 1393 aaPredicted RBP14.01□□□□□ -0.17
RBFOX1-208ENST00000547372 TDO2P48775 406 aa14.01□□□□□ -0.17
RBFOX1-208ENST00000547372 CARD6Q9BX69 1037 aa14.01□□□□□ -0.17
RBFOX1-208ENST00000547372 STK31Q9BXU1 1019 aa14.01□□□□□ -0.17
RBFOX1-208ENST00000547372 H2AFXP16104 143 aaPredicted RBP14□□□□□ -0.17
RBFOX1-208ENST00000547372 MUM1L1Q5H9M0 696 aa14□□□□□ -0.17
RBFOX1-208ENST00000547372 ISM2Q6H9L7 571 aa14□□□□□ -0.17
RBFOX1-208ENST00000547372 ARHGAP5Q13017 1502 aa14□□□□□ -0.17
RBFOX1-208ENST00000547372 RPAP2Q8IXW5 612 aaPredicted RBP14□□□□□ -0.17
RBFOX1-208ENST00000547372 MICALL1Q8N3F8 863 aa14□□□□□ -0.17
RBFOX1-208ENST00000547372 GOLGA5Q8TBA6 731 aa14□□□□□ -0.17
RBFOX1-208ENST00000547372 ERCC4Q92889 916 aaPredicted RBP14□□□□□ -0.17
RBFOX1-208ENST00000547372 SBNO2Q9Y2G9 1366 aa14□□□□□ -0.17
RBFOX1-208ENST00000547372 NUTM2FA1L443 756 aa13.99□□□□□ -0.17
RBFOX1-208ENST00000547372 ANAPC15P60006 121 aa13.99□□□□□ -0.17
RBFOX1-208ENST00000547372 NECAB1Q8N987 351 aa13.99□□□□□ -0.17
RBFOX1-208ENST00000547372 CXorf56Q9H5V9 222 aa13.99□□□□□ -0.17
RBFOX1-208ENST00000547372 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.99□□□□□ -0.17
RBFOX1-208ENST00000547372 CEP85Q6P2H3 762 aa13.99□□□□□ -0.17
RBFOX1-208ENST00000547372 RTL1A6NKG5 1358 aa13.99□□□□□ -0.17
RBFOX1-208ENST00000547372 RGS12O14924 1447 aa13.99□□□□□ -0.17
RBFOX1-208ENST00000547372 SLC4A2P04920 1241 aa13.99□□□□□ -0.17
RBFOX1-208ENST00000547372 PDE1AP54750 535 aa13.99□□□□□ -0.17
RBFOX1-208ENST00000547372 SLFNL1Q499Z3 407 aa13.99□□□□□ -0.17
RBFOX1-208ENST00000547372 ABCA8O94911 1581 aa13.98□□□□□ -0.17
RBFOX1-208ENST00000547372 PPRC1Q5VV67 1664 aaKnown RBP13.98□□□□□ -0.17
RBFOX1-208ENST00000547372 EIF3CLB5ME19 914 aaKnown RBP13.98□□□□□ -0.17
RBFOX1-208ENST00000547372 CWC27Q6UX04 472 aaKnown RBP13.98□□□□□ -0.17
RBFOX1-208ENST00000547372 EIF3CQ99613 913 aaKnown RBP13.98□□□□□ -0.17
RBFOX1-208ENST00000547372 FAM83GA6ND36 823 aa13.98□□□□□ -0.17
RBFOX1-208ENST00000547372 AK2P54819 239 aa13.98□□□□□ -0.17
RBFOX1-208ENST00000547372 LARP1BQ659C4 914 aaKnown RBP13.98□□□□□ -0.17
RBFOX1-208ENST00000547372 CCDC91Q7Z6B0 441 aa13.98□□□□□ -0.17
RBFOX1-208ENST00000547372 TTC6Q86TZ1 520 aa13.98□□□□□ -0.17
RBFOX1-208ENST00000547372 PLA2G4DQ86XP0 818 aa13.98□□□□□ -0.17
RBFOX1-208ENST00000547372 SMC2O95347 1197 aa13.98□□□□□ -0.17
RBFOX1-208ENST00000547372 MAP2K2P36507 400 aa13.98□□□□□ -0.17
RBFOX1-208ENST00000547372 KRT85P78386 507 aa13.98□□□□□ -0.17
RBFOX1-208ENST00000547372 NYAP1Q6ZVC0 841 aa13.98□□□□□ -0.17
RBFOX1-208ENST00000547372 DNAAF4Q8WXU2 420 aa13.98□□□□□ -0.17
RBFOX1-208ENST00000547372 BRMS1Q9HCU9 246 aa13.98□□□□□ -0.17
RBFOX1-208ENST00000547372 NSD2O96028 1365 aa13.98□□□□□ -0.17
RBFOX1-208ENST00000547372 F6X3S4 739 aa13.97□□□□□ -0.17
RBFOX1-208ENST00000547372 SASH3O75995 380 aa13.97□□□□□ -0.17
RBFOX1-208ENST00000547372 HSP90B1P14625 803 aaKnown RBP13.97□□□□□ -0.17
RBFOX1-208ENST00000547372 ATP2B1P20020 1258 aa13.97□□□□□ -0.17
RBFOX1-208ENST00000547372 ACTN2P35609 894 aa13.97□□□□□ -0.17
RBFOX1-208ENST00000547372 EVCP57679 992 aa13.97□□□□□ -0.17
RBFOX1-208ENST00000547372 SPATA32Q96LK8 384 aa13.97□□□□□ -0.17
RBFOX1-208ENST00000547372 MBIPQ9NS73 344 aa13.97□□□□□ -0.17
RBFOX1-208ENST00000547372 MIS18AQ9NYP9 233 aa13.97□□□□□ -0.17
RBFOX1-208ENST00000547372 SUFUQ9UMX1 484 aa13.97□□□□□ -0.17
RBFOX1-208ENST00000547372 ANKRD20A12PQ8NF67 263 aa13.97□□□□□ -0.17
RBFOX1-208ENST00000547372 TRPM2O94759 1503 aa13.97□□□□□ -0.17
RBFOX1-208ENST00000547372 TRHP20396 242 aaPredicted RBP13.97□□□□□ -0.17
RBFOX1-208ENST00000547372 DHX8Q14562 1220 aaKnown RBP13.97□□□□□ -0.17
RBFOX1-208ENST00000547372 SRRTQ9BXP5 876 aaKnown RBP13.97□□□□□ -0.17
RBFOX1-208ENST00000547372 ARFGAP3Q9NP61 516 aa13.97□□□□□ -0.17
RBFOX1-208ENST00000547372 C8orf58Q8NAV2 365 aa13.96□□□□□ -0.17
RBFOX1-208ENST00000547372 MAGEA9P43362 315 aa13.96□□□□□ -0.17
RBFOX1-208ENST00000547372 ORC3Q9UBD5 711 aaPredicted RBP13.96□□□□□ -0.17
RBFOX1-208ENST00000547372 H3BQV1 296 aa13.95□□□□□ -0.18
RBFOX1-208ENST00000547372 NR1I2O75469 434 aa13.95□□□□□ -0.18
RBFOX1-208ENST00000547372 IFFO2Q5TF58 517 aa13.95□□□□□ -0.18
RBFOX1-208ENST00000547372 ERBB3P21860 1342 aa13.95□□□□□ -0.18
RBFOX1-208ENST00000547372 YEATS2Q9ULM3 1422 aa13.95□□□□□ -0.18
RBFOX1-208ENST00000547372 STK3Q13188 491 aa13.95□□□□□ -0.18
RBFOX1-208ENST00000547372 SAMD1Q6SPF0 538 aaPredicted RBP13.95□□□□□ -0.18
RBFOX1-208ENST00000547372 MEIS3Q99687 375 aa13.95□□□□□ -0.18
RBFOX1-208ENST00000547372 RABEP2Q9H5N1 569 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms