RNA–Protein interactions for RNA: ENST00000547281.5

CDK4-204, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-204ENST00000547281 FAM177BA6PVY3 158 aa21.29■■□□□ 1
CDK4-204ENST00000547281 TOMM70O94826 608 aa21.29■■□□□ 1
CDK4-204ENST00000547281 HSPA6P17066 643 aa21.29■■□□□ 1
CDK4-204ENST00000547281 TPTE2Q6XPS3 522 aa21.29■■□□□ 1
CDK4-204ENST00000547281 C21orf2O43822 256 aa21.28■■□□□ 1
CDK4-204ENST00000547281 CNKSR1Q969H4 720 aa21.28■■□□□ 1
CDK4-204ENST00000547281 PRKRIP1Q9H875 184 aaPredicted RBP21.28■■□□□ 1
CDK4-204ENST00000547281 TSPYL4Q9UJ04 414 aa21.28■■□□□ 1
CDK4-204ENST00000547281 CEP350Q5VT06 3117 aa21.27■■□□□ 1
CDK4-204ENST00000547281 GTF2E1P29083 439 aaPredicted RBP21.27■■□□□ 1
CDK4-204ENST00000547281 SCN7AQ01118 1682 aa21.26■□□□□ 0.99
CDK4-204ENST00000547281 RGL2O15211 777 aa21.26■□□□□ 0.99
CDK4-204ENST00000547281 SRGNP10124 158 aa21.26■□□□□ 0.99
CDK4-204ENST00000547281 MYL6BP14649 208 aa21.26■□□□□ 0.99
CDK4-204ENST00000547281 TMPOP42166 694 aaKnown RBP21.26■□□□□ 0.99
CDK4-204ENST00000547281 LMOD3Q0VAK6 560 aa21.26■□□□□ 0.99
CDK4-204ENST00000547281 WDR43Q15061 677 aaKnown RBP eCLIP21.26■□□□□ 0.99
CDK4-204ENST00000547281 NEUROD2Q15784 382 aa21.26■□□□□ 0.99
CDK4-204ENST00000547281 HLFQ16534 295 aa21.26■□□□□ 0.99
CDK4-204ENST00000547281 STYK1Q6J9G0 422 aa21.26■□□□□ 0.99
CDK4-204ENST00000547281 MASTLQ96GX5 879 aa21.26■□□□□ 0.99
CDK4-204ENST00000547281 RRAGCQ9HB90 399 aa21.26■□□□□ 0.99
CDK4-204ENST00000547281 KIF6Q6ZMV9 814 aa21.25■□□□□ 0.99
CDK4-204ENST00000547281 CCDC146Q8IYE0 955 aa21.25■□□□□ 0.99
CDK4-204ENST00000547281 ERVV-1B6SEH8 477 aa21.23■□□□□ 0.99
CDK4-204ENST00000547281 NFKBIEO00221 500 aa21.23■□□□□ 0.99
CDK4-204ENST00000547281 DLG5Q8TDM6 1919 aa21.23■□□□□ 0.99
CDK4-204ENST00000547281 EIF2S2P20042 333 aaKnown RBP21.22■□□□□ 0.99
CDK4-204ENST00000547281 PRELPP51888 382 aa21.22■□□□□ 0.99
CDK4-204ENST00000547281 PRPF40BQ6NWY9 871 aaKnown RBP21.22■□□□□ 0.99
CDK4-204ENST00000547281 ZC3H4Q9UPT8 1303 aaKnown RBP21.22■□□□□ 0.99
CDK4-204ENST00000547281 NPR1P16066 1061 aa21.21■□□□□ 0.99
CDK4-204ENST00000547281 SOGA3Q5TF21 947 aa21.21■□□□□ 0.99
CDK4-204ENST00000547281 TTLL7Q6ZT98 887 aa21.21■□□□□ 0.99
CDK4-204ENST00000547281 BABAM1Q9NWV8 329 aa21.21■□□□□ 0.99
CDK4-204ENST00000547281 MAP3K15Q6ZN16 1313 aa21.21■□□□□ 0.99
CDK4-204ENST00000547281 GLTPD2A6NH11 291 aa21.2■□□□□ 0.98
CDK4-204ENST00000547281 RBM46Q8TBY0 533 aaKnown RBP21.2■□□□□ 0.98
CDK4-204ENST00000547281 RUNDC1Q96C34 613 aa21.2■□□□□ 0.98
CDK4-204ENST00000547281 NYXQ9GZU5 481 aa21.2■□□□□ 0.98
CDK4-204ENST00000547281 ZBTB3Q9H5J0 574 aa21.2■□□□□ 0.98
CDK4-204ENST00000547281 LAS1LQ9Y4W2 734 aaKnown RBP21.2■□□□□ 0.98
CDK4-204ENST00000547281 ERFEQ4G0M1 354 aa21.19■□□□□ 0.98
CDK4-204ENST00000547281 DPY19L2Q6NUT2 758 aa21.19■□□□□ 0.98
CDK4-204ENST00000547281 TAOK3Q9H2K8 898 aa21.19■□□□□ 0.98
CDK4-204ENST00000547281 ADAMTS8Q9UP79 889 aa21.19■□□□□ 0.98
CDK4-204ENST00000547281 ANKRD31Q8N7Z5 1873 aa21.19■□□□□ 0.98
CDK4-204ENST00000547281 DLEC1Q9Y238 1755 aa21.18■□□□□ 0.98
CDK4-204ENST00000547281 GPTP24298 496 aa21.18■□□□□ 0.98
CDK4-204ENST00000547281 APLP1P51693 650 aa21.18■□□□□ 0.98
CDK4-204ENST00000547281 BCORQ6W2J9 1755 aa21.18■□□□□ 0.98
CDK4-204ENST00000547281 SBF1O95248 1867 aa21.18■□□□□ 0.98
CDK4-204ENST00000547281 KLRG2A4D1S0 409 aaPredicted RBP21.17■□□□□ 0.98
CDK4-204ENST00000547281 VEGFAP15692 232 aaPredicted RBP21.17■□□□□ 0.98
CDK4-204ENST00000547281 ERBB4Q15303 1308 aa21.17■□□□□ 0.98
CDK4-204ENST00000547281 ALDH1B1P30837 517 aa21.16■□□□□ 0.98
CDK4-204ENST00000547281 NUTM1Q86Y26 1132 aa21.16■□□□□ 0.98
CDK4-204ENST00000547281 NECTIN2Q92692 538 aa21.16■□□□□ 0.98
CDK4-204ENST00000547281 KDM3BQ7LBC6 1761 aa21.15■□□□□ 0.98
CDK4-204ENST00000547281 FSTL1Q12841 308 aa21.15■□□□□ 0.98
CDK4-204ENST00000547281 CCDC93Q567U6 631 aa21.15■□□□□ 0.98
CDK4-204ENST00000547281 LTBP3Q9NS15 1303 aa21.14■□□□□ 0.97
CDK4-204ENST00000547281 GIGYF2Q6Y7W6 1299 aaKnown RBP21.14■□□□□ 0.97
CDK4-204ENST00000547281 CHL1O00533 1208 aa21.13■□□□□ 0.97
CDK4-204ENST00000547281 ANXA1P04083 346 aa21.13■□□□□ 0.97
CDK4-204ENST00000547281 PDIA6Q15084 440 aa21.13■□□□□ 0.97
CDK4-204ENST00000547281 SUSD4Q5VX71 490 aa21.13■□□□□ 0.97
CDK4-204ENST00000547281 C7orf43Q8WVR3 580 aa21.13■□□□□ 0.97
CDK4-204ENST00000547281 TRIM35Q9UPQ4 493 aa21.13■□□□□ 0.97
CDK4-204ENST00000547281 LAMB4A4D0S4 1761 aa21.13■□□□□ 0.97
CDK4-204ENST00000547281 COL11A2P13942 1736 aaPredicted RBP21.12■□□□□ 0.97
CDK4-204ENST00000547281 ANP32CO43423 234 aa21.12■□□□□ 0.97
CDK4-204ENST00000547281 AIMP1Q12904 312 aaKnown RBP21.12■□□□□ 0.97
CDK4-204ENST00000547281 PPP1R42Q7Z4L9 355 aa21.12■□□□□ 0.97
CDK4-204ENST00000547281 ZNF34Q8IZ26 560 aa21.12■□□□□ 0.97
CDK4-204ENST00000547281 RTKN2Q8IZC4 609 aa21.12■□□□□ 0.97
CDK4-204ENST00000547281 SMC1BQ8NDV3 1235 aa21.12■□□□□ 0.97
CDK4-204ENST00000547281 RPGRQ92834 1020 aaKnown RBP21.12■□□□□ 0.97
CDK4-204ENST00000547281 SLX4Q8IY92 1834 aa21.11■□□□□ 0.97
CDK4-204ENST00000547281 PROSER3Q2NL68 480 aa21.11■□□□□ 0.97
CDK4-204ENST00000547281 UBN2Q6ZU65 1347 aa21.1■□□□□ 0.97
CDK4-204ENST00000547281 PARP10Q53GL7 1025 aa21.1■□□□□ 0.97
CDK4-204ENST00000547281 OLFM4Q6UX06 510 aa21.1■□□□□ 0.97
CDK4-204ENST00000547281 COPS6Q7L5N1 327 aa21.1■□□□□ 0.97
CDK4-204ENST00000547281 FKBP4Q02790 459 aaKnown RBP eCLIP21.09■□□□□ 0.97
CDK4-204ENST00000547281 KRT24Q2M2I5 525 aa21.09■□□□□ 0.97
CDK4-204ENST00000547281 XAGE3Q8WTP9 111 aa21.09■□□□□ 0.97
CDK4-204ENST00000547281 CCDC88AQ3V6T2 1871 aa21.08■□□□□ 0.97
CDK4-204ENST00000547281 CRY2Q49AN0 593 aa21.08■□□□□ 0.97
CDK4-204ENST00000547281 CCDC184Q52MB2 194 aa21.08■□□□□ 0.97
CDK4-204ENST00000547281 LRP10Q7Z4F1 713 aa21.08■□□□□ 0.97
CDK4-204ENST00000547281 RBM17Q96I25 401 aaKnown RBP21.08■□□□□ 0.97
CDK4-204ENST00000547281 UTP14AQ9BVJ6 771 aaKnown RBP21.08■□□□□ 0.97
CDK4-204ENST00000547281 ZNF277Q9NRM2 450 aaPredicted RBP21.08■□□□□ 0.97
CDK4-204ENST00000547281 ABCC12Q96J65 1359 aa21.08■□□□□ 0.96
CDK4-204ENST00000547281 DDNO94850 711 aaPredicted RBP21.07■□□□□ 0.96
CDK4-204ENST00000547281 NLRP3Q96P20 1036 aa21.07■□□□□ 0.96
CDK4-204ENST00000547281 DDX21Q9NR30 783 aaKnown RBP eCLIP21.07■□□□□ 0.96
CDK4-204ENST00000547281 POTECB2RU33 542 aa21.06■□□□□ 0.96
CDK4-204ENST00000547281 APAF1O14727 1248 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms