RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 ITPRIPQ8IWB1 547 aa20.04■□□□□ 0.8
TRAFD1-203ENST00000547063 PROM2Q8N271 834 aa20.04■□□□□ 0.8
TRAFD1-203ENST00000547063 MAP3K2Q9Y2U5 619 aa20.04■□□□□ 0.8
TRAFD1-203ENST00000547063 RTCBQ9Y3I0 505 aaKnown RBP20.04■□□□□ 0.8
TRAFD1-203ENST00000547063 ADCY9O60503 1353 aa20.04■□□□□ 0.8
TRAFD1-203ENST00000547063 F6X3S4 739 aa20.03■□□□□ 0.8
TRAFD1-203ENST00000547063 GNPATO15228 680 aa20.03■□□□□ 0.8
TRAFD1-203ENST00000547063 ADRA2BP18089 450 aa20.03■□□□□ 0.8
TRAFD1-203ENST00000547063 IRX6P78412 446 aaPredicted RBP20.03■□□□□ 0.8
TRAFD1-203ENST00000547063 TMEM57Q8N5G2 664 aa20.03■□□□□ 0.8
TRAFD1-203ENST00000547063 CAMKK2Q96RR4 588 aa20.03■□□□□ 0.8
TRAFD1-203ENST00000547063 TNNQ9UQP3 1299 aa20.03■□□□□ 0.8
TRAFD1-203ENST00000547063 COL15A1P39059 1388 aa20.03■□□□□ 0.8
TRAFD1-203ENST00000547063 N4BP2Q86UW6 1770 aaPredicted RBP20.03■□□□□ 0.8
TRAFD1-203ENST00000547063 ATP10DQ9P241 1426 aa20.02■□□□□ 0.8
TRAFD1-203ENST00000547063 ERVV-1B6SEH8 477 aa20.02■□□□□ 0.8
TRAFD1-203ENST00000547063 RGL2O15211 777 aa20.02■□□□□ 0.8
TRAFD1-203ENST00000547063 DZIP3Q86Y13 1208 aaKnown RBP20.02■□□□□ 0.8
TRAFD1-203ENST00000547063 COG6Q9Y2V7 657 aa20.02■□□□□ 0.8
TRAFD1-203ENST00000547063 MAP3K15Q6ZN16 1313 aa20.02■□□□□ 0.79
TRAFD1-203ENST00000547063 TTLL7Q6ZT98 887 aa20.01■□□□□ 0.79
TRAFD1-203ENST00000547063 ARXQ96QS3 562 aa20.01■□□□□ 0.79
TRAFD1-203ENST00000547063 CRBNQ96SW2 442 aa20.01■□□□□ 0.79
TRAFD1-203ENST00000547063 METTL22Q9BUU2 404 aaPredicted RBP20.01■□□□□ 0.79
TRAFD1-203ENST00000547063 SRCIN1Q9C0H9 1055 aa20.01■□□□□ 0.79
TRAFD1-203ENST00000547063 ARFGEF2Q9Y6D5 1785 aa20■□□□□ 0.79
TRAFD1-203ENST00000547063 ALDH1L1O75891 902 aa20■□□□□ 0.79
TRAFD1-203ENST00000547063 EN1Q05925 392 aaPredicted RBP20■□□□□ 0.79
TRAFD1-203ENST00000547063 HSP90AB3PQ58FF7 597 aa20■□□□□ 0.79
TRAFD1-203ENST00000547063 LINS1Q8NG48 757 aa20■□□□□ 0.79
TRAFD1-203ENST00000547063 EP400Q96L91 3159 aa20■□□□□ 0.79
TRAFD1-203ENST00000547063 NUP188Q5SRE5 1749 aa19.99■□□□□ 0.79
TRAFD1-203ENST00000547063 IBTKQ9P2D0 1353 aaPredicted RBP19.99■□□□□ 0.79
TRAFD1-203ENST00000547063 SSFA2P28290 1259 aa19.99■□□□□ 0.79
TRAFD1-203ENST00000547063 BEND3Q5T5X7 828 aa19.99■□□□□ 0.79
TRAFD1-203ENST00000547063 ZBTB3Q9H5J0 574 aa19.99■□□□□ 0.79
TRAFD1-203ENST00000547063 ZNF652Q9Y2D9 606 aa19.99■□□□□ 0.79
TRAFD1-203ENST00000547063 EZH2Q15910 746 aaKnown RBP19.98■□□□□ 0.79
TRAFD1-203ENST00000547063 TRAPPC3LQ5T215 181 aa19.98■□□□□ 0.79
TRAFD1-203ENST00000547063 GIGYF2Q6Y7W6 1299 aaKnown RBP19.98■□□□□ 0.79
TRAFD1-203ENST00000547063 FLAD1Q8NFF5 587 aa19.98■□□□□ 0.79
TRAFD1-203ENST00000547063 UBR3Q6ZT12 1888 aa19.97■□□□□ 0.79
TRAFD1-203ENST00000547063 EXOC6Q8TAG9 804 aa19.97■□□□□ 0.79
TRAFD1-203ENST00000547063 TBC1D2BQ9UPU7 963 aa19.97■□□□□ 0.79
TRAFD1-203ENST00000547063 HDAC5Q9UQL6 1122 aa19.97■□□□□ 0.79
TRAFD1-203ENST00000547063 ZPR1O75312 459 aa19.96■□□□□ 0.79
TRAFD1-203ENST00000547063 TCIRG1Q13488 830 aa19.96■□□□□ 0.79
TRAFD1-203ENST00000547063 CLEC4GQ6UXB4 293 aa19.96■□□□□ 0.79
TRAFD1-203ENST00000547063 MYD88Q99836 296 aa19.96■□□□□ 0.79
TRAFD1-203ENST00000547063 GNAI3P08754 354 aa19.95■□□□□ 0.78
TRAFD1-203ENST00000547063 RFC4P35249 363 aa19.95■□□□□ 0.78
TRAFD1-203ENST00000547063 AKT1S1Q96B36 256 aa19.95■□□□□ 0.78
TRAFD1-203ENST00000547063 TFCP2L1Q9NZI6 479 aa19.95■□□□□ 0.78
TRAFD1-203ENST00000547063 NARFQ9UHQ1 456 aa19.95■□□□□ 0.78
TRAFD1-203ENST00000547063 GTF3C3Q9Y5Q9 886 aa19.95■□□□□ 0.78
TRAFD1-203ENST00000547063 BCORQ6W2J9 1755 aa19.94■□□□□ 0.78
TRAFD1-203ENST00000547063 ZBTB7BO15156 539 aaPredicted RBP19.94■□□□□ 0.78
TRAFD1-203ENST00000547063 CAMTA2O94983 1202 aa19.94■□□□□ 0.78
TRAFD1-203ENST00000547063 TRIM28Q13263 835 aaKnown RBP19.94■□□□□ 0.78
TRAFD1-203ENST00000547063 DEFB132Q7Z7B7 95 aa19.94■□□□□ 0.78
TRAFD1-203ENST00000547063 STK32BQ9NY57 414 aa19.94■□□□□ 0.78
TRAFD1-203ENST00000547063 NUP98P52948 1817 aa19.94■□□□□ 0.78
TRAFD1-203ENST00000547063 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.93■□□□□ 0.78
TRAFD1-203ENST00000547063 NEURL1BA8MQ27 555 aa19.93■□□□□ 0.78
TRAFD1-203ENST00000547063 CCDC191Q8NCU4 936 aa19.93■□□□□ 0.78
TRAFD1-203ENST00000547063 ARHGEF1Q92888 912 aaKnown RBP19.93■□□□□ 0.78
TRAFD1-203ENST00000547063 SCN7AQ01118 1682 aa19.93■□□□□ 0.78
TRAFD1-203ENST00000547063 ANKRD36CQ5JPF3 1778 aa19.93■□□□□ 0.78
TRAFD1-203ENST00000547063 PHF14O94880 888 aa19.92■□□□□ 0.78
TRAFD1-203ENST00000547063 IGKV5-2P06315 115 aa19.92■□□□□ 0.78
TRAFD1-203ENST00000547063 UPF1Q92900 1129 aaKnown RBP eCLIP19.92■□□□□ 0.78
TRAFD1-203ENST00000547063 C9orf78Q9NZ63 289 aaPredicted RBP19.92■□□□□ 0.78
TRAFD1-203ENST00000547063 AFDNP55196 1824 aaKnown RBP19.92■□□□□ 0.78
TRAFD1-203ENST00000547063 GCKRQ14397 625 aa19.91■□□□□ 0.78
TRAFD1-203ENST00000547063 HLFQ16534 295 aa19.91■□□□□ 0.78
TRAFD1-203ENST00000547063 CWF19L2Q2TBE0 894 aaKnown RBP19.91■□□□□ 0.78
TRAFD1-203ENST00000547063 ISCA1Q9BUE6 129 aa19.91■□□□□ 0.78
TRAFD1-203ENST00000547063 ZBTB40Q9NUA8 1239 aa19.91■□□□□ 0.78
TRAFD1-203ENST00000547063 CWC25Q9NXE8 425 aaPredicted RBP19.91■□□□□ 0.78
TRAFD1-203ENST00000547063 USP42Q9H9J4 1324 aaKnown RBP19.91■□□□□ 0.78
TRAFD1-203ENST00000547063 C4AP0C0L4 1744 aa19.9■□□□□ 0.78
TRAFD1-203ENST00000547063 SLC15A2Q16348 729 aa19.9■□□□□ 0.78
TRAFD1-203ENST00000547063 ZNF827Q17R98 1081 aa19.9■□□□□ 0.78
TRAFD1-203ENST00000547063 PARP10Q53GL7 1025 aa19.9■□□□□ 0.78
TRAFD1-203ENST00000547063 USP44Q9H0E7 712 aa19.9■□□□□ 0.78
TRAFD1-203ENST00000547063 PPP4R2Q9NY27 417 aa19.9■□□□□ 0.78
TRAFD1-203ENST00000547063 ATP5J2-PTCD1G3V325 749 aa19.89■□□□□ 0.77
TRAFD1-203ENST00000547063 GRM8O00222 908 aa19.89■□□□□ 0.77
TRAFD1-203ENST00000547063 UBTFL1P0CB47 393 aaPredicted RBP19.89■□□□□ 0.77
TRAFD1-203ENST00000547063 QSER1Q2KHR3 1735 aa19.89■□□□□ 0.77
TRAFD1-203ENST00000547063 USPL1Q5W0Q7 1092 aa19.89■□□□□ 0.77
TRAFD1-203ENST00000547063 ZNF34Q8IZ26 560 aa19.89■□□□□ 0.77
TRAFD1-203ENST00000547063 UTYO14607 1347 aa19.88■□□□□ 0.77
TRAFD1-203ENST00000547063 MEIS3Q99687 375 aa19.88■□□□□ 0.77
TRAFD1-203ENST00000547063 GNAI2P04899 355 aa19.87■□□□□ 0.77
TRAFD1-203ENST00000547063 AMIGO3Q86WK7 504 aa19.87■□□□□ 0.77
TRAFD1-203ENST00000547063 PPP1R42Q7Z4L9 355 aa19.86■□□□□ 0.77
TRAFD1-203ENST00000547063 NLRP10Q86W26 655 aa19.86■□□□□ 0.77
TRAFD1-203ENST00000547063 SRP68Q9UHB9 627 aaKnown RBP19.86■□□□□ 0.77
TRAFD1-203ENST00000547063 NIP7Q9Y221 180 aaKnown RBP eCLIP19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms