RNA–Protein interactions for RNA: ENST00000546490.1

CHPT1-202, Transcript of choline phosphotransferase 1, humanhuman

TSL 2

Gene CHPT1, Length 476 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-202ENST00000546490 PLEKHF1Q96S99 279 aa24.8■■□□□ 1.56
CHPT1-202ENST00000546490 WDR90Q96KV7 1748 aa24.8■■□□□ 1.56
CHPT1-202ENST00000546490 NUP98P52948 1817 aa24.79■■□□□ 1.56
CHPT1-202ENST00000546490 SLX4Q8IY92 1834 aa24.79■■□□□ 1.56
CHPT1-202ENST00000546490 C16orf71Q8IYS4 520 aaPredicted RBP24.79■■□□□ 1.56
CHPT1-202ENST00000546490 CCDC24Q8N4L8 307 aa24.79■■□□□ 1.56
CHPT1-202ENST00000546490 RGL2O15211 777 aa24.77■■□□□ 1.56
CHPT1-202ENST00000546490 MIS18AQ9NYP9 233 aa24.77■■□□□ 1.56
CHPT1-202ENST00000546490 NBPF26B4DH59 902 aa24.76■■□□□ 1.55
CHPT1-202ENST00000546490 RALBP1Q15311 655 aa24.76■■□□□ 1.55
CHPT1-202ENST00000546490 NBPF10Q6P3W6 841 aaKnown RBP24.76■■□□□ 1.55
CHPT1-202ENST00000546490 NBPF5PQ86XG9 351 aaPredicted RBP24.76■■□□□ 1.55
CHPT1-202ENST00000546490 NBPF15Q8N660 670 aa24.76■■□□□ 1.55
CHPT1-202ENST00000546490 NFKBIEO00221 500 aa24.75■■□□□ 1.55
CHPT1-202ENST00000546490 RBM46Q8TBY0 533 aaKnown RBP24.75■■□□□ 1.55
CHPT1-202ENST00000546490 APLP1P51693 650 aa24.74■■□□□ 1.55
CHPT1-202ENST00000546490 STYK1Q6J9G0 422 aa24.74■■□□□ 1.55
CHPT1-202ENST00000546490 C21orf2O43822 256 aa24.73■■□□□ 1.55
CHPT1-202ENST00000546490 CNKSR1Q969H4 720 aa24.73■■□□□ 1.55
CHPT1-202ENST00000546490 SRGNP10124 158 aa24.72■■□□□ 1.55
CHPT1-202ENST00000546490 PRELPP51888 382 aa24.72■■□□□ 1.55
CHPT1-202ENST00000546490 MASTLQ96GX5 879 aa24.72■■□□□ 1.55
CHPT1-202ENST00000546490 THUMPD2Q9BTF0 503 aaKnown RBP24.72■■□□□ 1.55
CHPT1-202ENST00000546490 NIP7Q9Y221 180 aaKnown RBP eCLIP24.72■■□□□ 1.55
CHPT1-202ENST00000546490 RRAGCQ9HB90 399 aa24.71■■□□□ 1.55
CHPT1-202ENST00000546490 ZNF219Q9P2Y4 722 aaPredicted RBP24.71■■□□□ 1.55
CHPT1-202ENST00000546490 EIF4A1P60842 406 aaKnown RBP24.7■■□□□ 1.54
CHPT1-202ENST00000546490 SOGA3Q5TF21 947 aa24.7■■□□□ 1.54
CHPT1-202ENST00000546490 PRPF40BQ6NWY9 871 aaKnown RBP24.7■■□□□ 1.54
CHPT1-202ENST00000546490 LTBP3Q9NS15 1303 aa24.69■■□□□ 1.54
CHPT1-202ENST00000546490 GLTPD2A6NH11 291 aa24.69■■□□□ 1.54
CHPT1-202ENST00000546490 FSTL1Q12841 308 aa24.69■■□□□ 1.54
CHPT1-202ENST00000546490 TPTE2Q6XPS3 522 aa24.69■■□□□ 1.54
CHPT1-202ENST00000546490 TAOK3Q9H2K8 898 aa24.69■■□□□ 1.54
CHPT1-202ENST00000546490 MYBBP1AQ9BQG0 1328 aaKnown RBP24.68■■□□□ 1.54
CHPT1-202ENST00000546490 KIF6Q6ZMV9 814 aa24.67■■□□□ 1.54
CHPT1-202ENST00000546490 ANKRD36CQ5JPF3 1778 aa24.67■■□□□ 1.54
CHPT1-202ENST00000546490 LMOD3Q0VAK6 560 aa24.66■■□□□ 1.54
CHPT1-202ENST00000546490 HLFQ16534 295 aa24.66■■□□□ 1.54
CHPT1-202ENST00000546490 TSPYL4Q9UJ04 414 aa24.66■■□□□ 1.54
CHPT1-202ENST00000546490 ERBB4Q15303 1308 aa24.65■■□□□ 1.54
CHPT1-202ENST00000546490 MAP3K15Q6ZN16 1313 aa24.65■■□□□ 1.54
CHPT1-202ENST00000546490 FAM177BA6PVY3 158 aa24.65■■□□□ 1.54
CHPT1-202ENST00000546490 NPR1P16066 1061 aa24.65■■□□□ 1.54
CHPT1-202ENST00000546490 RIPK4P57078 832 aa24.65■■□□□ 1.54
CHPT1-202ENST00000546490 DDX10Q13206 875 aaKnown RBP24.65■■□□□ 1.54
CHPT1-202ENST00000546490 ERFEQ4G0M1 354 aa24.65■■□□□ 1.54
CHPT1-202ENST00000546490 NGEFQ8N5V2 710 aa24.65■■□□□ 1.54
CHPT1-202ENST00000546490 RRP7AQ9Y3A4 280 aaKnown RBP24.65■■□□□ 1.54
CHPT1-202ENST00000546490 ERVV-1B6SEH8 477 aa24.64■■□□□ 1.54
CHPT1-202ENST00000546490 VEGFAP15692 232 aaPredicted RBP24.64■■□□□ 1.54
CHPT1-202ENST00000546490 GTF2E1P29083 439 aaPredicted RBP24.64■■□□□ 1.54
CHPT1-202ENST00000546490 SMC1BQ8NDV3 1235 aa24.64■■□□□ 1.54
CHPT1-202ENST00000546490 KLRG2A4D1S0 409 aaPredicted RBP24.63■■□□□ 1.53
CHPT1-202ENST00000546490 MYL6BP14649 208 aa24.63■■□□□ 1.53
CHPT1-202ENST00000546490 DPY19L2Q6NUT2 758 aa24.63■■□□□ 1.53
CHPT1-202ENST00000546490 NYXQ9GZU5 481 aa24.63■■□□□ 1.53
CHPT1-202ENST00000546490 IBTKQ9P2D0 1353 aaPredicted RBP24.63■■□□□ 1.53
CHPT1-202ENST00000546490 CCDC93Q567U6 631 aa24.62■■□□□ 1.53
CHPT1-202ENST00000546490 RIC1Q4ADV7 1423 aa24.61■■□□□ 1.53
CHPT1-202ENST00000546490 TMPOP42166 694 aaKnown RBP24.61■■□□□ 1.53
CHPT1-202ENST00000546490 TTLL7Q6ZT98 887 aa24.61■■□□□ 1.53
CHPT1-202ENST00000546490 BABAM1Q9NWV8 329 aa24.61■■□□□ 1.53
CHPT1-202ENST00000546490 ABCC12Q96J65 1359 aa24.61■■□□□ 1.53
CHPT1-202ENST00000546490 SCN4AP35499 1836 aa24.59■■□□□ 1.53
CHPT1-202ENST00000546490 ZBTB3Q9H5J0 574 aa24.59■■□□□ 1.53
CHPT1-202ENST00000546490 WDR43Q15061 677 aaKnown RBP eCLIP24.58■■□□□ 1.53
CHPT1-202ENST00000546490 C7orf43Q8WVR3 580 aa24.58■■□□□ 1.53
CHPT1-202ENST00000546490 ALDH1B1P30837 517 aa24.57■■□□□ 1.52
CHPT1-202ENST00000546490 UBN2Q6ZU65 1347 aa24.57■■□□□ 1.52
CHPT1-202ENST00000546490 GPTP24298 496 aa24.56■■□□□ 1.52
CHPT1-202ENST00000546490 NUTM1Q86Y26 1132 aa24.56■■□□□ 1.52
CHPT1-202ENST00000546490 CCDC146Q8IYE0 955 aa24.56■■□□□ 1.52
CHPT1-202ENST00000546490 FKBP4Q02790 459 aaKnown RBP eCLIP24.55■■□□□ 1.52
CHPT1-202ENST00000546490 CRY2Q49AN0 593 aa24.55■■□□□ 1.52
CHPT1-202ENST00000546490 GIGYF2Q6Y7W6 1299 aaKnown RBP24.55■■□□□ 1.52
CHPT1-202ENST00000546490 DNAJC5GQ8N7S2 189 aa24.55■■□□□ 1.52
CHPT1-202ENST00000546490 LAMB2P55268 1798 aa24.54■■□□□ 1.52
CHPT1-202ENST00000546490 EIF2S2P20042 333 aaKnown RBP24.54■■□□□ 1.52
CHPT1-202ENST00000546490 RTKN2Q8IZC4 609 aa24.54■■□□□ 1.52
CHPT1-202ENST00000546490 RUNDC1Q96C34 613 aa24.54■■□□□ 1.52
CHPT1-202ENST00000546490 NEUROD2Q15784 382 aa24.53■■□□□ 1.52
CHPT1-202ENST00000546490 RPGRQ92834 1020 aaKnown RBP24.53■■□□□ 1.52
CHPT1-202ENST00000546490 POTECB2RU33 542 aa24.52■■□□□ 1.52
CHPT1-202ENST00000546490 HTRA3P83110 453 aa24.52■■□□□ 1.52
CHPT1-202ENST00000546490 ZNF34Q8IZ26 560 aa24.52■■□□□ 1.52
CHPT1-202ENST00000546490 NTSR2O95665 410 aa24.51■■□□□ 1.51
CHPT1-202ENST00000546490 PDIA6Q15084 440 aa24.51■■□□□ 1.51
CHPT1-202ENST00000546490 PARP10Q53GL7 1025 aa24.51■■□□□ 1.51
CHPT1-202ENST00000546490 SUSD4Q5VX71 490 aa24.51■■□□□ 1.51
CHPT1-202ENST00000546490 LRP10Q7Z4F1 713 aa24.51■■□□□ 1.51
CHPT1-202ENST00000546490 PPP1R42Q7Z4L9 355 aa24.51■■□□□ 1.51
CHPT1-202ENST00000546490 SNED1Q8TER0 1413 aa24.51■■□□□ 1.51
CHPT1-202ENST00000546490 DDNO94850 711 aaPredicted RBP24.5■■□□□ 1.51
CHPT1-202ENST00000546490 OLFM4Q6UX06 510 aa24.5■■□□□ 1.51
CHPT1-202ENST00000546490 KLRG1Q96E93 195 aa24.5■■□□□ 1.51
CHPT1-202ENST00000546490 ZNF277Q9NRM2 450 aaPredicted RBP24.5■■□□□ 1.51
CHPT1-202ENST00000546490 PROSER3Q2NL68 480 aa24.49■■□□□ 1.51
CHPT1-202ENST00000546490 IQCA1LA6NCM1 817 aa24.48■■□□□ 1.51
CHPT1-202ENST00000546490 ANXA1P04083 346 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms