RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 NFIXQ14938 502 aa21.67■■□□□ 1.06
LTBR-215ENST00000546296 COPS6Q7L5N1 327 aa21.67■■□□□ 1.06
LTBR-215ENST00000546296 XAGE3Q8WTP9 111 aa21.67■■□□□ 1.06
LTBR-215ENST00000546296 MAP3K15Q6ZN16 1313 aa21.66■■□□□ 1.06
LTBR-215ENST00000546296 SLFN5Q08AF3 891 aa21.66■■□□□ 1.06
LTBR-215ENST00000546296 TBC1D9BQ66K14 1250 aa21.66■■□□□ 1.06
LTBR-215ENST00000546296 CLEC4GQ6UXB4 293 aa21.66■■□□□ 1.06
LTBR-215ENST00000546296 CDCA7LQ96GN5 454 aa21.66■■□□□ 1.06
LTBR-215ENST00000546296 SETDB2Q96T68 719 aa21.66■■□□□ 1.06
LTBR-215ENST00000546296 STK31Q9BXU1 1019 aa21.66■■□□□ 1.06
LTBR-215ENST00000546296 ZBTB3Q9H5J0 574 aa21.66■■□□□ 1.06
LTBR-215ENST00000546296 ERVV-1B6SEH8 477 aa21.65■■□□□ 1.06
LTBR-215ENST00000546296 DDR1Q08345 913 aa21.65■■□□□ 1.06
LTBR-215ENST00000546296 LRP10Q7Z4F1 713 aa21.65■■□□□ 1.06
LTBR-215ENST00000546296 POLRMTO00411 1230 aaKnown RBP21.64■■□□□ 1.05
LTBR-215ENST00000546296 TCERG1O14776 1098 aaKnown RBP21.64■■□□□ 1.05
LTBR-215ENST00000546296 VAMP4O75379 141 aa21.64■■□□□ 1.05
LTBR-215ENST00000546296 HLFQ16534 295 aa21.64■■□□□ 1.05
LTBR-215ENST00000546296 COL24A1Q17RW2 1714 aa21.63■■□□□ 1.05
LTBR-215ENST00000546296 RGL2O15211 777 aa21.63■■□□□ 1.05
LTBR-215ENST00000546296 SYT17Q9BSW7 474 aa21.63■■□□□ 1.05
LTBR-215ENST00000546296 SERPINB2P05120 415 aa21.62■■□□□ 1.05
LTBR-215ENST00000546296 NIP7Q9Y221 180 aaKnown RBP eCLIP21.62■■□□□ 1.05
LTBR-215ENST00000546296 CD2APQ9Y5K6 639 aa21.62■■□□□ 1.05
LTBR-215ENST00000546296 NPHP1O15259 732 aa21.61■■□□□ 1.05
LTBR-215ENST00000546296 SLC4A2P04920 1241 aa21.6■■□□□ 1.05
LTBR-215ENST00000546296 ANKRD13DQ6ZTN6 518 aa21.6■■□□□ 1.05
LTBR-215ENST00000546296 PHAXQ9H814 394 aaKnown RBP21.6■■□□□ 1.05
LTBR-215ENST00000546296 GIGYF2Q6Y7W6 1299 aaKnown RBP21.59■■□□□ 1.05
LTBR-215ENST00000546296 CARMIL3Q8ND23 1372 aa21.59■■□□□ 1.05
LTBR-215ENST00000546296 FAM177BA6PVY3 158 aa21.58■■□□□ 1.05
LTBR-215ENST00000546296 NBPF5PQ86XG9 351 aaPredicted RBP21.58■■□□□ 1.05
LTBR-215ENST00000546296 TRMT2AQ8IZ69 625 aaKnown RBP21.58■■□□□ 1.05
LTBR-215ENST00000546296 PLBD2Q8NHP8 589 aa21.58■■□□□ 1.05
LTBR-215ENST00000546296 SCN7AQ01118 1682 aa21.58■■□□□ 1.05
LTBR-215ENST00000546296 DDX58O95786 925 aaKnown RBP21.57■■□□□ 1.04
LTBR-215ENST00000546296 GPTP24298 496 aa21.57■■□□□ 1.04
LTBR-215ENST00000546296 HSP90AB3PQ58FF7 597 aa21.57■■□□□ 1.04
LTBR-215ENST00000546296 RIC3Q7Z5B4 369 aa21.57■■□□□ 1.04
LTBR-215ENST00000546296 NLGN2Q8NFZ4 835 aa21.57■■□□□ 1.04
LTBR-215ENST00000546296 DCAF8L1A6NGE4 600 aa21.55■■□□□ 1.04
LTBR-215ENST00000546296 GTF2E1P29083 439 aaPredicted RBP21.55■■□□□ 1.04
LTBR-215ENST00000546296 TPTE2Q6XPS3 522 aa21.55■■□□□ 1.04
LTBR-215ENST00000546296 CNBD1Q8NA66 436 aa21.55■■□□□ 1.04
LTBR-215ENST00000546296 BCORQ6W2J9 1755 aa21.54■■□□□ 1.04
LTBR-215ENST00000546296 ST5P78524 1137 aa21.54■■□□□ 1.04
LTBR-215ENST00000546296 TCIRG1Q13488 830 aa21.54■■□□□ 1.04
LTBR-215ENST00000546296 ZNF34Q8IZ26 560 aa21.54■■□□□ 1.04
LTBR-215ENST00000546296 ZBED9Q6R2W3 1325 aa21.54■■□□□ 1.04
LTBR-215ENST00000546296 TGFB2P61812 414 aa21.53■■□□□ 1.04
LTBR-215ENST00000546296 PRR5LQ6MZQ0 368 aa21.53■■□□□ 1.04
LTBR-215ENST00000546296 G2E3Q7L622 706 aa21.53■■□□□ 1.04
LTBR-215ENST00000546296 CCDC24Q8N4L8 307 aa21.53■■□□□ 1.04
LTBR-215ENST00000546296 NYXQ9GZU5 481 aa21.53■■□□□ 1.04
LTBR-215ENST00000546296 C10orf71Q711Q0 1435 aa21.53■■□□□ 1.04
LTBR-215ENST00000546296 ATP10DQ9P241 1426 aa21.53■■□□□ 1.04
LTBR-215ENST00000546296 PARP10Q53GL7 1025 aa21.52■■□□□ 1.04
LTBR-215ENST00000546296 A0A0G2JLW4 131 aa21.51■■□□□ 1.03
LTBR-215ENST00000546296 FLIIQ13045 1269 aa21.51■■□□□ 1.03
LTBR-215ENST00000546296 SUSD4Q5VX71 490 aa21.51■■□□□ 1.03
LTBR-215ENST00000546296 KSR2Q6VAB6 950 aa21.51■■□□□ 1.03
LTBR-215ENST00000546296 PPP1R42Q7Z4L9 355 aa21.51■■□□□ 1.03
LTBR-215ENST00000546296 PELP1Q8IZL8 1130 aaKnown RBP21.51■■□□□ 1.03
LTBR-215ENST00000546296 PI4KAP2A4QPH2 592 aa21.5■■□□□ 1.03
LTBR-215ENST00000546296 ATP5J2-PTCD1G3V325 749 aa21.5■■□□□ 1.03
LTBR-215ENST00000546296 FKBP5Q13451 457 aaPredicted RBP21.5■■□□□ 1.03
LTBR-215ENST00000546296 PI4KAP1Q8N8J0 262 aa21.5■■□□□ 1.03
LTBR-215ENST00000546296 ZNF428Q96B54 188 aa21.5■■□□□ 1.03
LTBR-215ENST00000546296 BRIP1Q9BX63 1249 aa21.5■■□□□ 1.03
LTBR-215ENST00000546296 MAP3K2Q9Y2U5 619 aa21.5■■□□□ 1.03
LTBR-215ENST00000546296 UBN2Q6ZU65 1347 aa21.5■■□□□ 1.03
LTBR-215ENST00000546296 CT47B1P0C2W7 299 aaPredicted RBP21.49■■□□□ 1.03
LTBR-215ENST00000546296 DPEP1P16444 411 aa21.49■■□□□ 1.03
LTBR-215ENST00000546296 PDE6BP35913 854 aa21.49■■□□□ 1.03
LTBR-215ENST00000546296 MYD88Q99836 296 aa21.49■■□□□ 1.03
LTBR-215ENST00000546296 UTP14AQ9BVJ6 771 aaKnown RBP21.49■■□□□ 1.03
LTBR-215ENST00000546296 GPR162Q16538 588 aa21.48■■□□□ 1.03
LTBR-215ENST00000546296 NLRP10Q86W26 655 aa21.48■■□□□ 1.03
LTBR-215ENST00000546296 NUTM1Q86Y26 1132 aa21.48■■□□□ 1.03
LTBR-215ENST00000546296 C2CD5Q86YS7 1000 aa21.48■■□□□ 1.03
LTBR-215ENST00000546296 WWC3Q9ULE0 1092 aa21.48■■□□□ 1.03
LTBR-215ENST00000546296 H0YIN7 160 aa21.47■■□□□ 1.03
LTBR-215ENST00000546296 CHRNA5P30532 468 aa21.47■■□□□ 1.03
LTBR-215ENST00000546296 SSH1Q8WYL5 1049 aa21.47■■□□□ 1.03
LTBR-215ENST00000546296 ISCA1Q9BUE6 129 aa21.47■■□□□ 1.03
LTBR-215ENST00000546296 METTL22Q9BUU2 404 aaPredicted RBP21.47■■□□□ 1.03
LTBR-215ENST00000546296 TRMT112Q9UI30 125 aaKnown RBP21.47■■□□□ 1.03
LTBR-215ENST00000546296 NUP98P52948 1817 aa21.46■■□□□ 1.03
LTBR-215ENST00000546296 NEXNQ0ZGT2 675 aa21.46■■□□□ 1.03
LTBR-215ENST00000546296 ERFEQ4G0M1 354 aa21.46■■□□□ 1.03
LTBR-215ENST00000546296 MRPL50Q8N5N7 158 aaKnown RBP21.46■■□□□ 1.03
LTBR-215ENST00000546296 NTSR2O95665 410 aa21.45■■□□□ 1.02
LTBR-215ENST00000546296 TRIM28Q13263 835 aaKnown RBP21.45■■□□□ 1.02
LTBR-215ENST00000546296 ALDH1L2Q3SY69 923 aa21.45■■□□□ 1.02
LTBR-215ENST00000546296 BCL2L13Q9BXK5 485 aa21.45■■□□□ 1.02
LTBR-215ENST00000546296 SMC4Q9NTJ3 1288 aa21.45■■□□□ 1.02
LTBR-215ENST00000546296 PDZRN3Q9UPQ7 1066 aa21.45■■□□□ 1.02
LTBR-215ENST00000546296 PXDNLA1KZ92 1463 aa21.45■■□□□ 1.02
LTBR-215ENST00000546296 AFDNP55196 1824 aaKnown RBP21.44■■□□□ 1.02
LTBR-215ENST00000546296 PIM2Q9P1W9 311 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms