RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 HYPKQ9NX55 129 aa14.23□□□□□ -0.13
NPC1L1-204ENST00000546276 GOLGA6L10A6NI86 522 aa14.23□□□□□ -0.13
NPC1L1-204ENST00000546276 AMOTQ4VCS5 1084 aa14.23□□□□□ -0.13
NPC1L1-204ENST00000546276 NECAB1Q8N987 351 aa14.23□□□□□ -0.13
NPC1L1-204ENST00000546276 CCT2P78371 535 aaKnown RBP14.22□□□□□ -0.13
NPC1L1-204ENST00000546276 CT47A1Q5JQC4 288 aaPredicted RBP14.22□□□□□ -0.13
NPC1L1-204ENST00000546276 USHBP1Q8N6Y0 703 aa14.22□□□□□ -0.13
NPC1L1-204ENST00000546276 NEK1Q96PY6 1258 aa14.22□□□□□ -0.13
NPC1L1-204ENST00000546276 IDH1O75874 414 aaKnown RBP14.22□□□□□ -0.13
NPC1L1-204ENST00000546276 ANO6Q4KMQ2 910 aa14.22□□□□□ -0.13
NPC1L1-204ENST00000546276 CCDC148Q8NFR7 591 aa14.22□□□□□ -0.13
NPC1L1-204ENST00000546276 CCDC150Q8NCX0 1101 aa14.22□□□□□ -0.13
NPC1L1-204ENST00000546276 A2MP01023 1474 aa14.22□□□□□ -0.13
NPC1L1-204ENST00000546276 ZBTB7BO15156 539 aaPredicted RBP14.22□□□□□ -0.13
NPC1L1-204ENST00000546276 FAM193AP78312 1265 aa14.22□□□□□ -0.13
NPC1L1-204ENST00000546276 AKAP2Q9Y2D5 859 aa14.22□□□□□ -0.13
NPC1L1-204ENST00000546276 PI4KAP2A4QPH2 592 aa14.21□□□□□ -0.13
NPC1L1-204ENST00000546276 BMS1Q14692 1282 aaKnown RBP14.21□□□□□ -0.13
NPC1L1-204ENST00000546276 PI4KAP1Q8N8J0 262 aa14.21□□□□□ -0.13
NPC1L1-204ENST00000546276 AIDAQ96BJ3 306 aa14.21□□□□□ -0.13
NPC1L1-204ENST00000546276 DMRT2Q9Y5R5 561 aa14.21□□□□□ -0.13
NPC1L1-204ENST00000546276 PLCH2O75038 1416 aa14.21□□□□□ -0.13
NPC1L1-204ENST00000546276 DNM1Q05193 864 aaKnown RBP14.21□□□□□ -0.13
NPC1L1-204ENST00000546276 KIF4BQ2VIQ3 1234 aa14.21□□□□□ -0.13
NPC1L1-204ENST00000546276 POLR3GO15318 223 aaPredicted RBP14.21□□□□□ -0.13
NPC1L1-204ENST00000546276 KIAA1328Q86T90 577 aa14.21□□□□□ -0.13
NPC1L1-204ENST00000546276 RBSNQ9H1K0 784 aa14.21□□□□□ -0.13
NPC1L1-204ENST00000546276 BIN1O00499 593 aa14.21□□□□□ -0.14
NPC1L1-204ENST00000546276 CCDC43Q96MW1 224 aaKnown RBP14.21□□□□□ -0.14
NPC1L1-204ENST00000546276 POLKQ9UBT6 870 aa14.21□□□□□ -0.14
NPC1L1-204ENST00000546276 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.21□□□□□ -0.14
NPC1L1-204ENST00000546276 JAKMIP3Q5VZ66 844 aa14.2□□□□□ -0.14
NPC1L1-204ENST00000546276 FBXO31Q5XUX0 539 aaPredicted RBP14.2□□□□□ -0.14
NPC1L1-204ENST00000546276 PROSER2Q86WR7 435 aaPredicted RBP14.2□□□□□ -0.14
NPC1L1-204ENST00000546276 MAP3K2Q9Y2U5 619 aa14.2□□□□□ -0.14
NPC1L1-204ENST00000546276 ADGRL2O95490 1459 aa14.2□□□□□ -0.14
NPC1L1-204ENST00000546276 GOLGA8BA8MQT2 603 aa14.2□□□□□ -0.14
NPC1L1-204ENST00000546276 KRT222Q8N1A0 295 aa14.2□□□□□ -0.14
NPC1L1-204ENST00000546276 CCDC191Q8NCU4 936 aa14.2□□□□□ -0.14
NPC1L1-204ENST00000546276 MPHOSPH8Q99549 860 aa14.2□□□□□ -0.14
NPC1L1-204ENST00000546276 CRACR2AQ9BSW2 395 aa14.2□□□□□ -0.14
NPC1L1-204ENST00000546276 DACT1Q9NYF0 836 aa14.2□□□□□ -0.14
NPC1L1-204ENST00000546276 KIAA0556O60303 1618 aa14.2□□□□□ -0.14
NPC1L1-204ENST00000546276 EIF5P55010 431 aaKnown RBP14.2□□□□□ -0.14
NPC1L1-204ENST00000546276 CNNM3Q8NE01 707 aa14.2□□□□□ -0.14
NPC1L1-204ENST00000546276 CCDC94Q9BW85 323 aaPredicted RBP14.2□□□□□ -0.14
NPC1L1-204ENST00000546276 MPRIPQ6WCQ1 1025 aa14.2□□□□□ -0.14
NPC1L1-204ENST00000546276 GOLGA6L9A6NEM1 432 aa14.19□□□□□ -0.14
NPC1L1-204ENST00000546276 SKILP12757 684 aa14.19□□□□□ -0.14
NPC1L1-204ENST00000546276 HSP90AB2PQ58FF8 381 aa14.19□□□□□ -0.14
NPC1L1-204ENST00000546276 USP8P40818 1118 aa14.19□□□□□ -0.14
NPC1L1-204ENST00000546276 ZNF445P59923 1031 aa14.19□□□□□ -0.14
NPC1L1-204ENST00000546276 KLHL10Q6JEL2 608 aa14.19□□□□□ -0.14
NPC1L1-204ENST00000546276 RBM8AQ9Y5S9 174 aaKnown RBP14.19□□□□□ -0.14
NPC1L1-204ENST00000546276 TANGO6Q9C0B7 1094 aa14.19□□□□□ -0.14
NPC1L1-204ENST00000546276 ERLIN2O94905 339 aa14.18□□□□□ -0.14
NPC1L1-204ENST00000546276 KRT18P05783 430 aaKnown RBP14.18□□□□□ -0.14
NPC1L1-204ENST00000546276 CCDC85AQ96PX6 553 aaPredicted RBP14.18□□□□□ -0.14
NPC1L1-204ENST00000546276 TYRO3Q06418 890 aa14.18□□□□□ -0.14
NPC1L1-204ENST00000546276 MAP9Q49MG5 647 aa14.18□□□□□ -0.14
NPC1L1-204ENST00000546276 ZNF213O14771 459 aa14.18□□□□□ -0.14
NPC1L1-204ENST00000546276 METTL24Q5JXM2 366 aa14.18□□□□□ -0.14
NPC1L1-204ENST00000546276 CCDC196A0A1B0GTZ2 297 aa14.17□□□□□ -0.14
NPC1L1-204ENST00000546276 GTF2F1P35269 517 aaKnown RBP eCLIP14.17□□□□□ -0.141e-7■■■■■ 30
NPC1L1-204ENST00000546276 AK2P54819 239 aa14.17□□□□□ -0.14
NPC1L1-204ENST00000546276 CHMLP26374 656 aa14.17□□□□□ -0.14
NPC1L1-204ENST00000546276 BRF1Q92994 677 aa14.17□□□□□ -0.14
NPC1L1-204ENST00000546276 USP16Q9Y5T5 823 aa14.17□□□□□ -0.14
NPC1L1-204ENST00000546276 ZMYM3Q14202 1370 aa14.17□□□□□ -0.14
NPC1L1-204ENST00000546276 POTEB2H3BUK9 544 aa14.17□□□□□ -0.14
NPC1L1-204ENST00000546276 DNAJC25Q9H1X3 360 aa14.17□□□□□ -0.14
NPC1L1-204ENST00000546276 ZFYVE9O95405 1425 aa14.17□□□□□ -0.14
NPC1L1-204ENST00000546276 MCM3P25205 808 aa14.17□□□□□ -0.14
NPC1L1-204ENST00000546276 TOM1L2Q6ZVM7 507 aa14.17□□□□□ -0.14
NPC1L1-204ENST00000546276 PHACTR3Q96KR7 559 aa14.17□□□□□ -0.14
NPC1L1-204ENST00000546276 ORC3Q9UBD5 711 aaPredicted RBP14.17□□□□□ -0.14
NPC1L1-204ENST00000546276 GCC2Q8IWJ2 1684 aa14.16□□□□□ -0.14
NPC1L1-204ENST00000546276 TCEANC2Q96MN5 208 aa14.16□□□□□ -0.14
NPC1L1-204ENST00000546276 GOLIM4O00461 696 aa14.16□□□□□ -0.14
NPC1L1-204ENST00000546276 SOGA3Q5TF21 947 aa14.16□□□□□ -0.14
NPC1L1-204ENST00000546276 ACEP12821 1306 aa14.16□□□□□ -0.14
NPC1L1-204ENST00000546276 A0A087WZG4 1122 aa14.16□□□□□ -0.14
NPC1L1-204ENST00000546276 POLR3DP05423 398 aaPredicted RBP14.16□□□□□ -0.14
NPC1L1-204ENST00000546276 LRP2BPQ9P2M1 347 aa14.16□□□□□ -0.14
NPC1L1-204ENST00000546276 ZNF397Q8NF99 534 aaPredicted RBP14.15□□□□□ -0.14
NPC1L1-204ENST00000546276 NAPBQ9H115 298 aa14.15□□□□□ -0.14
NPC1L1-204ENST00000546276 NPHP3Q7Z494 1330 aa14.15□□□□□ -0.14
NPC1L1-204ENST00000546276 CENPHQ9H3R5 247 aa14.15□□□□□ -0.14
NPC1L1-204ENST00000546276 PHAXQ9H814 394 aaKnown RBP14.15□□□□□ -0.14
NPC1L1-204ENST00000546276 STRN4Q9NRL3 753 aa14.15□□□□□ -0.14
NPC1L1-204ENST00000546276 A0A1W2PP64 1363 aa14.15□□□□□ -0.14
NPC1L1-204ENST00000546276 TERF1P54274 439 aa14.15□□□□□ -0.14
NPC1L1-204ENST00000546276 ODF2Q5BJF6 829 aa14.15□□□□□ -0.14
NPC1L1-204ENST00000546276 GTPBP4Q9BZE4 634 aaKnown RBP14.15□□□□□ -0.14
NPC1L1-204ENST00000546276 RAI14Q9P0K7 980 aa14.15□□□□□ -0.14
NPC1L1-204ENST00000546276 CTDP1Q9Y5B0 961 aaPredicted RBP14.15□□□□□ -0.14
NPC1L1-204ENST00000546276 SLC12A7Q9Y666 1083 aa14.15□□□□□ -0.14
NPC1L1-204ENST00000546276 GOLGA8AA7E2F4 631 aa14.15□□□□□ -0.15
NPC1L1-204ENST00000546276 PTGS1P23219 599 aa14.15□□□□□ -0.15
NPC1L1-204ENST00000546276 CPLX3Q8WVH0 158 aa14.15□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms