RNA–Protein interactions for RNA: ENST00000546202.5

PPP1CA-211, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 4

Gene PPP1CA, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-211ENST00000546202 TTLL7Q6ZT98 887 aa20.74■□□□□ 0.91
PPP1CA-211ENST00000546202 RTCBQ9Y3I0 505 aaKnown RBP20.74■□□□□ 0.91
PPP1CA-211ENST00000546202 SCN7AQ01118 1682 aa20.73■□□□□ 0.91
PPP1CA-211ENST00000546202 ANKRD36CQ5JPF3 1778 aa20.73■□□□□ 0.91
PPP1CA-211ENST00000546202 ZNF827Q17R98 1081 aa20.73■□□□□ 0.91
PPP1CA-211ENST00000546202 KSR2Q6VAB6 950 aa20.73■□□□□ 0.91
PPP1CA-211ENST00000546202 AMIGO3Q86WK7 504 aa20.73■□□□□ 0.91
PPP1CA-211ENST00000546202 TNNQ9UQP3 1299 aa20.73■□□□□ 0.91
PPP1CA-211ENST00000546202 ZNF330Q9Y3S2 320 aaPredicted RBP20.73■□□□□ 0.91
PPP1CA-211ENST00000546202 PXDNLA1KZ92 1463 aa20.73■□□□□ 0.91
PPP1CA-211ENST00000546202 ABCC4O15439 1325 aa20.73■□□□□ 0.91
PPP1CA-211ENST00000546202 A0A087WZG4 1122 aa20.72■□□□□ 0.91
PPP1CA-211ENST00000546202 PI4KAP2A4QPH2 592 aa20.72■□□□□ 0.91
PPP1CA-211ENST00000546202 ADRA2BP18089 450 aa20.72■□□□□ 0.91
PPP1CA-211ENST00000546202 PDE3AQ14432 1141 aa20.72■□□□□ 0.91
PPP1CA-211ENST00000546202 ANKRD13DQ6ZTN6 518 aa20.72■□□□□ 0.91
PPP1CA-211ENST00000546202 PI4KAP1Q8N8J0 262 aa20.72■□□□□ 0.91
PPP1CA-211ENST00000546202 PLBD2Q8NHP8 589 aa20.72■□□□□ 0.91
PPP1CA-211ENST00000546202 MS4A1P11836 297 aa20.71■□□□□ 0.91
PPP1CA-211ENST00000546202 SSFA2P28290 1259 aa20.71■□□□□ 0.91
PPP1CA-211ENST00000546202 KIF6Q6ZMV9 814 aa20.71■□□□□ 0.91
PPP1CA-211ENST00000546202 NPM2Q86SE8 214 aaKnown RBP20.71■□□□□ 0.91
PPP1CA-211ENST00000546202 DZIP3Q86Y13 1208 aaKnown RBP20.71■□□□□ 0.91
PPP1CA-211ENST00000546202 ZNF784Q8NCA9 323 aaPredicted RBP20.71■□□□□ 0.91
PPP1CA-211ENST00000546202 MAP3K15Q6ZN16 1313 aa20.71■□□□□ 0.91
PPP1CA-211ENST00000546202 F6X3S4 739 aa20.7■□□□□ 0.9
PPP1CA-211ENST00000546202 ZBTB7AO95365 584 aa20.7■□□□□ 0.9
PPP1CA-211ENST00000546202 DZIP1LQ8IYY4 767 aaKnown RBP20.7■□□□□ 0.9
PPP1CA-211ENST00000546202 MAP3K2Q9Y2U5 619 aa20.7■□□□□ 0.9
PPP1CA-211ENST00000546202 ERVV-1B6SEH8 477 aa20.69■□□□□ 0.9
PPP1CA-211ENST00000546202 RLBP1P12271 317 aa20.69■□□□□ 0.9
PPP1CA-211ENST00000546202 C20orf194Q5TEA3 1177 aa20.69■□□□□ 0.9
PPP1CA-211ENST00000546202 SMIM5Q71RC9 77 aa20.69■□□□□ 0.9
PPP1CA-211ENST00000546202 RIC3Q7Z5B4 369 aa20.69■□□□□ 0.9
PPP1CA-211ENST00000546202 DNAAF4Q8WXU2 420 aa20.69■□□□□ 0.9
PPP1CA-211ENST00000546202 CLUAP1Q96AJ1 413 aa20.69■□□□□ 0.9
PPP1CA-211ENST00000546202 TBC1D2BQ9UPU7 963 aa20.69■□□□□ 0.9
PPP1CA-211ENST00000546202 ATF5Q9Y2D1 282 aaPredicted RBP20.69■□□□□ 0.9
PPP1CA-211ENST00000546202 AFDNP55196 1824 aaKnown RBP20.69■□□□□ 0.9
PPP1CA-211ENST00000546202 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.68■□□□□ 0.9
PPP1CA-211ENST00000546202 RGL2O15211 777 aa20.68■□□□□ 0.9
PPP1CA-211ENST00000546202 CAMTA2O94983 1202 aa20.68■□□□□ 0.9
PPP1CA-211ENST00000546202 PTGER2P43116 358 aa20.68■□□□□ 0.9
PPP1CA-211ENST00000546202 SLC15A2Q16348 729 aa20.68■□□□□ 0.9
PPP1CA-211ENST00000546202 TRAPPC3LQ5T215 181 aa20.68■□□□□ 0.9
PPP1CA-211ENST00000546202 ARHGEF1Q92888 912 aaKnown RBP20.68■□□□□ 0.9
PPP1CA-211ENST00000546202 ZBTB3Q9H5J0 574 aa20.68■□□□□ 0.9
PPP1CA-211ENST00000546202 STK32BQ9NY57 414 aa20.68■□□□□ 0.9
PPP1CA-211ENST00000546202 TFCP2L1Q9NZI6 479 aa20.68■□□□□ 0.9
PPP1CA-211ENST00000546202 ATP10DQ9P241 1426 aa20.68■□□□□ 0.9
PPP1CA-211ENST00000546202 INTS3Q68E01 1043 aaKnown RBP20.67■□□□□ 0.9
PPP1CA-211ENST00000546202 FTSJ3Q8IY81 847 aaKnown RBP20.67■□□□□ 0.9
PPP1CA-211ENST00000546202 PANK1Q8TE04 598 aa20.67■□□□□ 0.9
PPP1CA-211ENST00000546202 METTL22Q9BUU2 404 aaPredicted RBP20.67■□□□□ 0.9
PPP1CA-211ENST00000546202 NARFQ9UHQ1 456 aa20.67■□□□□ 0.9
PPP1CA-211ENST00000546202 PHF14O94880 888 aa20.66■□□□□ 0.9
PPP1CA-211ENST00000546202 GIGYF2Q6Y7W6 1299 aaKnown RBP20.66■□□□□ 0.9
PPP1CA-211ENST00000546202 FLAD1Q8NFF5 587 aa20.66■□□□□ 0.9
PPP1CA-211ENST00000546202 ARXQ96QS3 562 aa20.66■□□□□ 0.9
PPP1CA-211ENST00000546202 PNPLA7Q6ZV29 1317 aa20.65■□□□□ 0.9
PPP1CA-211ENST00000546202 USP42Q9H9J4 1324 aaKnown RBP20.65■□□□□ 0.9
PPP1CA-211ENST00000546202 HLFQ16534 295 aa20.65■□□□□ 0.9
PPP1CA-211ENST00000546202 BEND3Q5T5X7 828 aa20.65■□□□□ 0.9
PPP1CA-211ENST00000546202 TMEM57Q8N5G2 664 aa20.65■□□□□ 0.9
PPP1CA-211ENST00000546202 IBTKQ9P2D0 1353 aaPredicted RBP20.64■□□□□ 0.89
PPP1CA-211ENST00000546202 RFC4P35249 363 aa20.64■□□□□ 0.89
PPP1CA-211ENST00000546202 CCT4P50991 539 aaKnown RBP20.64■□□□□ 0.89
PPP1CA-211ENST00000546202 SLC4A10Q6U841 1118 aa20.64■□□□□ 0.89
PPP1CA-211ENST00000546202 ZPR1O75312 459 aa20.63■□□□□ 0.89
PPP1CA-211ENST00000546202 TCIRG1Q13488 830 aa20.63■□□□□ 0.89
PPP1CA-211ENST00000546202 CLEC4GQ6UXB4 293 aa20.63■□□□□ 0.89
PPP1CA-211ENST00000546202 LINS1Q8NG48 757 aa20.63■□□□□ 0.89
PPP1CA-211ENST00000546202 SYT17Q9BSW7 474 aa20.63■□□□□ 0.89
PPP1CA-211ENST00000546202 BCL2L12Q9HB09 334 aa20.63■□□□□ 0.89
PPP1CA-211ENST00000546202 SRP68Q9UHB9 627 aaKnown RBP20.63■□□□□ 0.89
PPP1CA-211ENST00000546202 NEXNQ0ZGT2 675 aa20.62■□□□□ 0.89
PPP1CA-211ENST00000546202 MVPQ14764 893 aaKnown RBP20.62■□□□□ 0.89
PPP1CA-211ENST00000546202 HSP90AB3PQ58FF7 597 aa20.62■□□□□ 0.89
PPP1CA-211ENST00000546202 USPL1Q5W0Q7 1092 aa20.62■□□□□ 0.89
PPP1CA-211ENST00000546202 COL23A1Q86Y22 540 aaPredicted RBP20.62■□□□□ 0.89
PPP1CA-211ENST00000546202 MYD88Q99836 296 aa20.62■□□□□ 0.89
PPP1CA-211ENST00000546202 FHDC1Q9C0D6 1143 aaPredicted RBP20.62■□□□□ 0.89
PPP1CA-211ENST00000546202 SRCIN1Q9C0H9 1055 aa20.62■□□□□ 0.89
PPP1CA-211ENST00000546202 ZNF652Q9Y2D9 606 aa20.62■□□□□ 0.89
PPP1CA-211ENST00000546202 CASZ1Q86V15 1759 aa20.62■□□□□ 0.89
PPP1CA-211ENST00000546202 ALDH1L1O75891 902 aa20.61■□□□□ 0.89
PPP1CA-211ENST00000546202 IGKV5-2P06315 115 aa20.61■□□□□ 0.89
PPP1CA-211ENST00000546202 TRIM28Q13263 835 aaKnown RBP20.61■□□□□ 0.89
PPP1CA-211ENST00000546202 ISCA1Q9BUE6 129 aa20.61■□□□□ 0.89
PPP1CA-211ENST00000546202 COG6Q9Y2V7 657 aa20.61■□□□□ 0.89
PPP1CA-211ENST00000546202 COL24A1Q17RW2 1714 aa20.61■□□□□ 0.89
PPP1CA-211ENST00000546202 ZNF34Q8IZ26 560 aa20.6■□□□□ 0.89
PPP1CA-211ENST00000546202 NEURL1BA8MQ27 555 aa20.59■□□□□ 0.89
PPP1CA-211ENST00000546202 IRX6P78412 446 aaPredicted RBP20.59■□□□□ 0.89
PPP1CA-211ENST00000546202 CWF19L2Q2TBE0 894 aaKnown RBP20.59■□□□□ 0.89
PPP1CA-211ENST00000546202 ITPRIPQ8IWB1 547 aa20.59■□□□□ 0.89
PPP1CA-211ENST00000546202 CRBNQ96SW2 442 aa20.59■□□□□ 0.89
PPP1CA-211ENST00000546202 ATP5J2-PTCD1G3V325 749 aa20.58■□□□□ 0.89
PPP1CA-211ENST00000546202 GYS1P13807 737 aa20.58■□□□□ 0.89
PPP1CA-211ENST00000546202 NEFLP07196 543 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms