RNA–Protein interactions for RNA: ENST00000545930.5

DDB1-225, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,278 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-225ENST00000545930 THUMPD2Q9BTF0 503 aaKnown RBP12.55□□□□□ -0.4
DDB1-225ENST00000545930 ADAMTS7Q9UKP4 1686 aa12.54□□□□□ -0.4
DDB1-225ENST00000545930 HMGB2P26583 209 aaKnown RBP12.54□□□□□ -0.4
DDB1-225ENST00000545930 PPP4R3BQ5MIZ7 849 aa12.54□□□□□ -0.4
DDB1-225ENST00000545930 DUSP27Q5VZP5 1158 aa12.54□□□□□ -0.4
DDB1-225ENST00000545930 POTEEQ6S8J3 1075 aa12.54□□□□□ -0.4
DDB1-225ENST00000545930 TTC5Q8N0Z6 440 aa12.54□□□□□ -0.4
DDB1-225ENST00000545930 CDCA7LQ96GN5 454 aa12.54□□□□□ -0.4
DDB1-225ENST00000545930 SOS1Q07889 1333 aaPredicted RBP12.54□□□□□ -0.4
DDB1-225ENST00000545930 KDM6AO15550 1401 aaPredicted RBP12.54□□□□□ -0.4
DDB1-225ENST00000545930 PRIM1P49642 420 aaKnown RBP12.53□□□□□ -0.4
DDB1-225ENST00000545930 ZNF428Q96B54 188 aa12.53□□□□□ -0.4
DDB1-225ENST00000545930 SYTL4Q96C24 671 aaPredicted RBP12.53□□□□□ -0.4
DDB1-225ENST00000545930 MBIPQ9NS73 344 aa12.53□□□□□ -0.4
DDB1-225ENST00000545930 TK2O00142 265 aa12.52□□□□□ -0.41
DDB1-225ENST00000545930 ZNF790Q6PG37 636 aa12.52□□□□□ -0.41
DDB1-225ENST00000545930 SMARCC1Q92922 1105 aaPredicted RBP12.52□□□□□ -0.41
DDB1-225ENST00000545930 ADGRD1Q6QNK2 874 aa12.51□□□□□ -0.41
DDB1-225ENST00000545930 FANCIQ9NVI1 1328 aa12.51□□□□□ -0.41
DDB1-225ENST00000545930 MRC1P22897 1456 aa12.51□□□□□ -0.41
DDB1-225ENST00000545930 HOXB7P09629 217 aa12.5□□□□□ -0.41
DDB1-225ENST00000545930 PIGBQ92521 554 aa12.5□□□□□ -0.41
DDB1-225ENST00000545930 TSR2Q969E8 191 aaKnown RBP12.5□□□□□ -0.41
DDB1-225ENST00000545930 ACSBG1Q96GR2 724 aa12.5□□□□□ -0.41
DDB1-225ENST00000545930 FMNL2Q96PY5 1086 aa12.5□□□□□ -0.41
DDB1-225ENST00000545930 CRISPLD2Q9H0B8 497 aa12.5□□□□□ -0.41
DDB1-225ENST00000545930 MIS18AQ9NYP9 233 aa12.5□□□□□ -0.41
DDB1-225ENST00000545930 ITGB4P16144 1822 aa12.5□□□□□ -0.41
DDB1-225ENST00000545930 BRWD3Q6RI45 1802 aa12.49□□□□□ -0.41
DDB1-225ENST00000545930 SIPA1L3O60292 1781 aaPredicted RBP12.49□□□□□ -0.41
DDB1-225ENST00000545930 RGS12O14924 1447 aa12.49□□□□□ -0.41
DDB1-225ENST00000545930 EIF4A1P60842 406 aaKnown RBP12.49□□□□□ -0.41
DDB1-225ENST00000545930 EXOSC9Q06265 439 aaKnown RBP12.49□□□□□ -0.41
DDB1-225ENST00000545930 TEX13AQ9BXU3 409 aaPredicted RBP12.49□□□□□ -0.41
DDB1-225ENST00000545930 SNRPA1P09661 255 aaKnown RBP12.48□□□□□ -0.41
DDB1-225ENST00000545930 TWISTNBQ3B726 338 aaPredicted RBP12.48□□□□□ -0.41
DDB1-225ENST00000545930 VSIG10Q8N0Z9 540 aa12.48□□□□□ -0.41
DDB1-225ENST00000545930 SLC39A6Q13433 755 aa12.47□□□□□ -0.41
DDB1-225ENST00000545930 OXER1Q8TDS5 423 aa12.47□□□□□ -0.41
DDB1-225ENST00000545930 PDE4AP27815 886 aa12.46□□□□□ -0.41
DDB1-225ENST00000545930 ALDH1L2Q3SY69 923 aa12.46□□□□□ -0.41
DDB1-225ENST00000545930 FAM182BQ5T319 152 aa12.46□□□□□ -0.41
DDB1-225ENST00000545930 ATG3Q9NT62 314 aa12.46□□□□□ -0.41
DDB1-225ENST00000545930 SBF2Q86WG5 1849 aa12.46□□□□□ -0.42
DDB1-225ENST00000545930 KDM3BQ7LBC6 1761 aa12.46□□□□□ -0.42
DDB1-225ENST00000545930 DOT1LQ8TEK3 1739 aa12.45□□□□□ -0.42
DDB1-225ENST00000545930 KCNQ2O43526 872 aa12.45□□□□□ -0.42
DDB1-225ENST00000545930 VAMP4O75379 141 aa12.45□□□□□ -0.42
DDB1-225ENST00000545930 GIGYF1O75420 1035 aaPredicted RBP12.45□□□□□ -0.42
DDB1-225ENST00000545930 PPP1R15BQ5SWA1 713 aa12.45□□□□□ -0.42
DDB1-225ENST00000545930 CCDC30Q5VVM6 783 aa12.45□□□□□ -0.42
DDB1-225ENST00000545930 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.45□□□□□ -0.42
DDB1-225ENST00000545930 C8orf58Q8NAV2 365 aa12.45□□□□□ -0.42
DDB1-225ENST00000545930 ASAP1Q9ULH1 1129 aa12.45□□□□□ -0.42
DDB1-225ENST00000545930 TOGARAM1Q9Y4F4 1720 aa12.45□□□□□ -0.42
DDB1-225ENST00000545930 HEG1Q9ULI3 1381 aa12.44□□□□□ -0.42
DDB1-225ENST00000545930 ELL2O00472 640 aaPredicted RBP12.44□□□□□ -0.42
DDB1-225ENST00000545930 KCNQ3O43525 872 aa12.44□□□□□ -0.42
DDB1-225ENST00000545930 PTCD1O75127 700 aaKnown RBP12.44□□□□□ -0.42
DDB1-225ENST00000545930 TRIM37O94972 964 aa12.44□□□□□ -0.42
DDB1-225ENST00000545930 SF3B2Q13435 895 aaKnown RBP12.44□□□□□ -0.42
DDB1-225ENST00000545930 CCDC125Q86Z20 511 aa12.44□□□□□ -0.42
DDB1-225ENST00000545930 ZNF496Q96IT1 587 aaPredicted RBP12.44□□□□□ -0.42
DDB1-225ENST00000545930 STK31Q9BXU1 1019 aa12.44□□□□□ -0.42
DDB1-225ENST00000545930 HCSTQ9UBK5 93 aa12.44□□□□□ -0.42
DDB1-225ENST00000545930 RCAN3Q9UKA8 241 aa12.44□□□□□ -0.42
DDB1-225ENST00000545930 NHSQ6T4R5 1651 aa12.44□□□□□ -0.42
DDB1-225ENST00000545930 STARD3NLO95772 234 aa12.43□□□□□ -0.42
DDB1-225ENST00000545930 CACNA1FO60840 1977 aa12.43□□□□□ -0.42
DDB1-225ENST00000545930 PALLDQ8WX93 1383 aa12.43□□□□□ -0.42
DDB1-225ENST00000545930 LOC102724428A0A0B4J2F2 783 aa12.42□□□□□ -0.42
DDB1-225ENST00000545930 PLSCR1O15162 318 aa12.42□□□□□ -0.42
DDB1-225ENST00000545930 RARSP54136 660 aaKnown RBP12.42□□□□□ -0.42
DDB1-225ENST00000545930 SIK1P57059 783 aa12.42□□□□□ -0.42
DDB1-225ENST00000545930 HDGFL1Q5TGJ6 251 aa12.42□□□□□ -0.42
DDB1-225ENST00000545930 TSPYL6Q8N831 410 aa12.42□□□□□ -0.42
DDB1-225ENST00000545930 ERBB4Q15303 1308 aa12.41□□□□□ -0.42
DDB1-225ENST00000545930 IPO8O15397 1037 aaKnown RBP12.41□□□□□ -0.42
DDB1-225ENST00000545930 EIF2S2P20042 333 aaKnown RBP12.41□□□□□ -0.42
DDB1-225ENST00000545930 ATP6V1AP38606 617 aa12.41□□□□□ -0.42
DDB1-225ENST00000545930 BRPF1P55201 1214 aaPredicted RBP12.41□□□□□ -0.42
DDB1-225ENST00000545930 SLC27A3Q5K4L6 730 aa12.41□□□□□ -0.42
DDB1-225ENST00000545930 DBF4Q9UBU7 674 aaPredicted RBP12.41□□□□□ -0.42
DDB1-225ENST00000545930 PAPPAQ13219 1627 aa12.4□□□□□ -0.42
DDB1-225ENST00000545930 BTAF1O14981 1849 aa12.4□□□□□ -0.42
DDB1-225ENST00000545930 HRO43593 1189 aa12.4□□□□□ -0.42
DDB1-225ENST00000545930 APBA3O96018 575 aa12.4□□□□□ -0.42
DDB1-225ENST00000545930 MS4A1P11836 297 aa12.4□□□□□ -0.42
DDB1-225ENST00000545930 KRT24Q2M2I5 525 aa12.4□□□□□ -0.42
DDB1-225ENST00000545930 NPM2Q86SE8 214 aaKnown RBP12.4□□□□□ -0.42
DDB1-225ENST00000545930 SMC4Q9NTJ3 1288 aa12.4□□□□□ -0.42
DDB1-225ENST00000545930 USP16Q9Y5T5 823 aa12.4□□□□□ -0.42
DDB1-225ENST00000545930 UBR2Q8IWV8 1755 aa12.4□□□□□ -0.42
DDB1-225ENST00000545930 KIF16BQ96L93 1317 aa12.39□□□□□ -0.43
DDB1-225ENST00000545930 HYPKQ9NX55 129 aa12.39□□□□□ -0.43
DDB1-225ENST00000545930 KCPQ6ZWJ8 1503 aa12.38□□□□□ -0.43
DDB1-225ENST00000545930 BAG6P46379 1132 aa12.38□□□□□ -0.43
DDB1-225ENST00000545930 PSEN2P49810 448 aa12.38□□□□□ -0.43
DDB1-225ENST00000545930 UPF1Q92900 1129 aaKnown RBP eCLIP12.38□□□□□ -0.43
DDB1-225ENST00000545930 DDX21Q9NR30 783 aaKnown RBP eCLIP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms