RNA–Protein interactions for RNA: ENST00000545718.2

SCAP-215, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 2,950 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-215ENST00000545718 BICC1Q9H694 974 aaKnown RBP18.88■□□□□ 0.61
SCAP-215ENST00000545718 HYPKQ9NX55 129 aa18.88■□□□□ 0.61
SCAP-215ENST00000545718 GRM8O00222 908 aa18.87■□□□□ 0.61
SCAP-215ENST00000545718 G3BP1Q13283 466 aaKnown RBP eCLIP18.87■□□□□ 0.61
SCAP-215ENST00000545718 ECHDC1Q9NTX5 307 aa18.87■□□□□ 0.61
SCAP-215ENST00000545718 ERBB4Q15303 1308 aa18.87■□□□□ 0.61
SCAP-215ENST00000545718 NPHP4O75161 1426 aaPredicted RBP18.87■□□□□ 0.61
SCAP-215ENST00000545718 ALDH1L1O75891 902 aa18.87■□□□□ 0.61
SCAP-215ENST00000545718 BRD1O95696 1058 aa18.87■□□□□ 0.61
SCAP-215ENST00000545718 CASTP20810 708 aaKnown RBP18.87■□□□□ 0.61
SCAP-215ENST00000545718 CHRNA2Q15822 529 aa18.87■□□□□ 0.61
SCAP-215ENST00000545718 TMEM63CQ9P1W3 806 aa18.87■□□□□ 0.61
SCAP-215ENST00000545718 LINS1Q8NG48 757 aa18.86■□□□□ 0.61
SCAP-215ENST00000545718 LSG1Q9H089 658 aaKnown RBP18.86■□□□□ 0.61
SCAP-215ENST00000545718 AK2P54819 239 aa18.86■□□□□ 0.61
SCAP-215ENST00000545718 PRPF40BQ6NWY9 871 aaKnown RBP18.86■□□□□ 0.61
SCAP-215ENST00000545718 RNF214Q8ND24 703 aa18.85■□□□□ 0.61
SCAP-215ENST00000545718 RBSNQ9H1K0 784 aa18.85■□□□□ 0.61
SCAP-215ENST00000545718 DDX21Q9NR30 783 aaKnown RBP eCLIP18.85■□□□□ 0.61
SCAP-215ENST00000545718 ERBB3P21860 1342 aa18.85■□□□□ 0.61
SCAP-215ENST00000545718 HSPA2P54652 639 aa18.85■□□□□ 0.61
SCAP-215ENST00000545718 PTH1RQ03431 593 aa18.85■□□□□ 0.61
SCAP-215ENST00000545718 ZNF790Q6PG37 636 aa18.85■□□□□ 0.61
SCAP-215ENST00000545718 INTS4Q96HW7 963 aaKnown RBP18.85■□□□□ 0.61
SCAP-215ENST00000545718 ZNF445P59923 1031 aa18.84■□□□□ 0.61
SCAP-215ENST00000545718 NEXNQ0ZGT2 675 aa18.84■□□□□ 0.61
SCAP-215ENST00000545718 XAGE3Q8WTP9 111 aa18.84■□□□□ 0.61
SCAP-215ENST00000545718 RUFY2Q8WXA3 655 aa18.84■□□□□ 0.61
SCAP-215ENST00000545718 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.84■□□□□ 0.61
SCAP-215ENST00000545718 MYD88Q99836 296 aa18.84■□□□□ 0.61
SCAP-215ENST00000545718 BOLA2Q9H3K6 86 aa18.84■□□□□ 0.61
SCAP-215ENST00000545718 TTC41PQ6P2S7 1318 aa18.84■□□□□ 0.61
SCAP-215ENST00000545718 TATP17735 454 aaPredicted RBP18.84■□□□□ 0.61
SCAP-215ENST00000545718 CLCN1P35523 988 aa18.84■□□□□ 0.61
SCAP-215ENST00000545718 CCDC173Q0VFZ6 552 aa18.84■□□□□ 0.61
SCAP-215ENST00000545718 COPS6Q7L5N1 327 aa18.84■□□□□ 0.61
SCAP-215ENST00000545718 ERC1Q8IUD2 1116 aa18.84■□□□□ 0.61
SCAP-215ENST00000545718 JAKMIP1Q96N16 626 aaKnown RBP18.84■□□□□ 0.61
SCAP-215ENST00000545718 HDAC5Q9UQL6 1122 aa18.84■□□□□ 0.61
SCAP-215ENST00000545718 ATF3P18847 181 aa18.83■□□□□ 0.6
SCAP-215ENST00000545718 EAF2Q96CJ1 260 aaPredicted RBP18.83■□□□□ 0.6
SCAP-215ENST00000545718 TLR7Q9NYK1 1049 aaKnown RBP18.83■□□□□ 0.6
SCAP-215ENST00000545718 CCDC9Q9Y3X0 531 aaKnown RBP18.83■□□□□ 0.6
SCAP-215ENST00000545718 MTX1Q13505 466 aa18.82■□□□□ 0.6
SCAP-215ENST00000545718 MED1Q15648 1581 aaPredicted RBP18.82■□□□□ 0.6
SCAP-215ENST00000545718 TTC5Q8N0Z6 440 aa18.82■□□□□ 0.6
SCAP-215ENST00000545718 KAZALD1Q96I82 304 aa18.82■□□□□ 0.6
SCAP-215ENST00000545718 FAM227BQ96M60 508 aa18.82■□□□□ 0.6
SCAP-215ENST00000545718 C19orf44Q9H6X5 657 aa18.82■□□□□ 0.6
SCAP-215ENST00000545718 SASH1O94885 1247 aa18.81■□□□□ 0.6
SCAP-215ENST00000545718 IGKV5-2P06315 115 aa18.81■□□□□ 0.6
SCAP-215ENST00000545718 ZNF496Q96IT1 587 aaPredicted RBP18.81■□□□□ 0.6
SCAP-215ENST00000545718 USP54Q70EL1 1684 aa18.81■□□□□ 0.6
SCAP-215ENST00000545718 ADCK5Q3MIX3 580 aa18.81■□□□□ 0.6
SCAP-215ENST00000545718 RUFY3Q7L099 469 aa18.81■□□□□ 0.6
SCAP-215ENST00000545718 SMC3Q9UQE7 1217 aa18.81■□□□□ 0.6
SCAP-215ENST00000545718 WDR33Q9C0J8 1336 aaKnown RBP18.81■□□□□ 0.6
SCAP-215ENST00000545718 GADD45BO75293 160 aaPredicted RBP18.81■□□□□ 0.6
SCAP-215ENST00000545718 MBD3O95983 291 aa18.81■□□□□ 0.6
SCAP-215ENST00000545718 PDIA6Q15084 440 aa18.81■□□□□ 0.6
SCAP-215ENST00000545718 CCDC83Q8IWF9 413 aa18.81■□□□□ 0.6
SCAP-215ENST00000545718 FSD1Q9BTV5 496 aa18.81■□□□□ 0.6
SCAP-215ENST00000545718 SLC52A2Q9HAB3 445 aa18.81■□□□□ 0.6
SCAP-215ENST00000545718 LIMCH1Q9UPQ0 1083 aa18.81■□□□□ 0.6
SCAP-215ENST00000545718 USP16Q9Y5T5 823 aa18.81■□□□□ 0.6
SCAP-215ENST00000545718 LARP1Q6PKG0 1096 aaKnown RBP18.8■□□□□ 0.6
SCAP-215ENST00000545718 NPHP3Q7Z494 1330 aa18.8■□□□□ 0.6
SCAP-215ENST00000545718 KDM3BQ7LBC6 1761 aa18.8■□□□□ 0.6
SCAP-215ENST00000545718 NCAPD2Q15021 1401 aa18.8■□□□□ 0.6
SCAP-215ENST00000545718 ATP5J2-PTCD1G3V325 749 aa18.79■□□□□ 0.6
SCAP-215ENST00000545718 PTCD1O75127 700 aaKnown RBP18.79■□□□□ 0.6
SCAP-215ENST00000545718 EVI5LQ96CN4 794 aa18.79■□□□□ 0.6
SCAP-215ENST00000545718 LARGE1O95461 756 aa18.79■□□□□ 0.6
SCAP-215ENST00000545718 PDRG1Q9NUG6 133 aa18.79■□□□□ 0.6
SCAP-215ENST00000545718 TUBGCP6Q96RT7 1819 aa18.79■□□□□ 0.6
SCAP-215ENST00000545718 PHKG2P15735 406 aa18.78■□□□□ 0.6
SCAP-215ENST00000545718 USP48Q86UV5 1035 aa18.78■□□□□ 0.6
SCAP-215ENST00000545718 TCEANC2Q96MN5 208 aa18.78■□□□□ 0.6
SCAP-215ENST00000545718 NMIQ13287 307 aaPredicted RBP18.78■□□□□ 0.6
SCAP-215ENST00000545718 EPHA10Q5JZY3 1008 aa18.78■□□□□ 0.6
SCAP-215ENST00000545718 EDC3Q96F86 508 aaKnown RBP18.78■□□□□ 0.6
SCAP-215ENST00000545718 NEURL1BA8MQ27 555 aa18.78■□□□□ 0.6
SCAP-215ENST00000545718 ZKSCAN1P17029 563 aaPredicted RBP18.78■□□□□ 0.6
SCAP-215ENST00000545718 LRSAM1Q6UWE0 723 aa18.78■□□□□ 0.6
SCAP-215ENST00000545718 TTC14Q96N46 770 aa18.78■□□□□ 0.6
SCAP-215ENST00000545718 CHMP3Q9Y3E7 222 aa18.78■□□□□ 0.6
SCAP-215ENST00000545718 NDUFB9Q9Y6M9 179 aa18.78■□□□□ 0.6
SCAP-215ENST00000545718 CNPY2Q9Y2B0 182 aa18.77■□□□□ 0.6
SCAP-215ENST00000545718 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.77■□□□□ 0.6
SCAP-215ENST00000545718 CYP46A1Q9Y6A2 500 aa18.77■□□□□ 0.6
SCAP-215ENST00000545718 LMO7Q8WWI1 1683 aa18.77■□□□□ 0.6
SCAP-215ENST00000545718 FIBPO43427 364 aa18.77■□□□□ 0.59
SCAP-215ENST00000545718 ANKRD13DQ6ZTN6 518 aa18.77■□□□□ 0.59
SCAP-215ENST00000545718 UBE3BQ7Z3V4 1068 aa18.77■□□□□ 0.59
SCAP-215ENST00000545718 IFNL2Q8IZJ0 200 aa18.77■□□□□ 0.59
SCAP-215ENST00000545718 RBM8AQ9Y5S9 174 aaKnown RBP18.77■□□□□ 0.59
SCAP-215ENST00000545718 C1orf167Q5SNV9 1468 aa18.76■□□□□ 0.59
SCAP-215ENST00000545718 GCKRQ14397 625 aa18.76■□□□□ 0.59
SCAP-215ENST00000545718 NECAB1Q8N987 351 aa18.76■□□□□ 0.59
SCAP-215ENST00000545718 HEG1Q9ULI3 1381 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms