RNA–Protein interactions for RNA: ENST00000545368.5

CDCA3-210, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 619 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-210ENST00000545368 TBC1D2BQ9UPU7 963 aa16.57■□□□□ 0.24
CDCA3-210ENST00000545368 MAP3K15Q6ZN16 1313 aa16.56■□□□□ 0.24
CDCA3-210ENST00000545368 TTLL7Q6ZT98 887 aa16.56■□□□□ 0.24
CDCA3-210ENST00000545368 SMIM5Q71RC9 77 aa16.56■□□□□ 0.24
CDCA3-210ENST00000545368 FRAT1Q92837 279 aaPredicted RBP16.56■□□□□ 0.24
CDCA3-210ENST00000545368 NARFQ9UHQ1 456 aa16.56■□□□□ 0.24
CDCA3-210ENST00000545368 NOB1Q9ULX3 412 aaKnown RBP16.56■□□□□ 0.24
CDCA3-210ENST00000545368 USP42Q9H9J4 1324 aaKnown RBP16.55■□□□□ 0.24
CDCA3-210ENST00000545368 ANKRD13DQ6ZTN6 518 aa16.55■□□□□ 0.24
CDCA3-210ENST00000545368 RIC3Q7Z5B4 369 aa16.55■□□□□ 0.24
CDCA3-210ENST00000545368 COL23A1Q86Y22 540 aaPredicted RBP16.55■□□□□ 0.24
CDCA3-210ENST00000545368 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.55■□□□□ 0.24
CDCA3-210ENST00000545368 PLBD2Q8NHP8 589 aa16.55■□□□□ 0.24
CDCA3-210ENST00000545368 ZBTB3Q9H5J0 574 aa16.55■□□□□ 0.24
CDCA3-210ENST00000545368 ZNF652Q9Y2D9 606 aa16.55■□□□□ 0.24
CDCA3-210ENST00000545368 ERVV-1B6SEH8 477 aa16.54■□□□□ 0.24
CDCA3-210ENST00000545368 USPL1Q5W0Q7 1092 aa16.54■□□□□ 0.24
CDCA3-210ENST00000545368 ZKSCAN2Q63HK3 967 aa16.54■□□□□ 0.24
CDCA3-210ENST00000545368 KSR2Q6VAB6 950 aa16.54■□□□□ 0.24
CDCA3-210ENST00000545368 ARHGAP45Q92619 1136 aa16.54■□□□□ 0.24
CDCA3-210ENST00000545368 API5Q9BZZ5 524 aaKnown RBP16.54■□□□□ 0.24
CDCA3-210ENST00000545368 NUP98P52948 1817 aa16.54■□□□□ 0.24
CDCA3-210ENST00000545368 PI4KAP2A4QPH2 592 aa16.53■□□□□ 0.24
CDCA3-210ENST00000545368 RGL2O15211 777 aa16.53■□□□□ 0.24
CDCA3-210ENST00000545368 CAMTA2O94983 1202 aa16.53■□□□□ 0.24
CDCA3-210ENST00000545368 PI4KAP1Q8N8J0 262 aa16.53■□□□□ 0.24
CDCA3-210ENST00000545368 SRP68Q9UHB9 627 aaKnown RBP16.53■□□□□ 0.24
CDCA3-210ENST00000545368 ANKRD36CQ5JPF3 1778 aa16.53■□□□□ 0.24
CDCA3-210ENST00000545368 ADCY9O60503 1353 aa16.52■□□□□ 0.24
CDCA3-210ENST00000545368 R3HDM1Q15032 1099 aaKnown RBP16.52■□□□□ 0.24
CDCA3-210ENST00000545368 HSP90AB3PQ58FF7 597 aa16.52■□□□□ 0.24
CDCA3-210ENST00000545368 ATF7IPQ6VMQ6 1270 aa16.52■□□□□ 0.24
CDCA3-210ENST00000545368 GIGYF2Q6Y7W6 1299 aaKnown RBP16.52■□□□□ 0.24
CDCA3-210ENST00000545368 DNAAF4Q8WXU2 420 aa16.52■□□□□ 0.24
CDCA3-210ENST00000545368 MAP3K2Q9Y2U5 619 aa16.52■□□□□ 0.24
CDCA3-210ENST00000545368 CASZ1Q86V15 1759 aa16.51■□□□□ 0.23
CDCA3-210ENST00000545368 PXDNLA1KZ92 1463 aa16.51■□□□□ 0.23
CDCA3-210ENST00000545368 NEXNQ0ZGT2 675 aa16.51■□□□□ 0.23
CDCA3-210ENST00000545368 CLEC4GQ6UXB4 293 aa16.51■□□□□ 0.23
CDCA3-210ENST00000545368 MS4A1P11836 297 aa16.5■□□□□ 0.23
CDCA3-210ENST00000545368 GYS1P13807 737 aa16.5■□□□□ 0.23
CDCA3-210ENST00000545368 HLFQ16534 295 aa16.5■□□□□ 0.23
CDCA3-210ENST00000545368 FTSJ3Q8IY81 847 aaKnown RBP16.5■□□□□ 0.23
CDCA3-210ENST00000545368 SLC16A10Q8TF71 515 aa16.5■□□□□ 0.23
CDCA3-210ENST00000545368 METTL22Q9BUU2 404 aaPredicted RBP16.5■□□□□ 0.23
CDCA3-210ENST00000545368 N4BP2Q86UW6 1770 aaPredicted RBP16.5■□□□□ 0.23
CDCA3-210ENST00000545368 ATP10DQ9P241 1426 aa16.5■□□□□ 0.23
CDCA3-210ENST00000545368 AFDNP55196 1824 aaKnown RBP16.49■□□□□ 0.23
CDCA3-210ENST00000545368 PSDA5PKW4 1024 aaPredicted RBP16.49■□□□□ 0.23
CDCA3-210ENST00000545368 F6X3S4 739 aa16.49■□□□□ 0.23
CDCA3-210ENST00000545368 TRIM27P14373 513 aa16.49■□□□□ 0.23
CDCA3-210ENST00000545368 RRP1P56182 461 aaKnown RBP16.49■□□□□ 0.23
CDCA3-210ENST00000545368 SLC4A10Q6U841 1118 aa16.49■□□□□ 0.23
CDCA3-210ENST00000545368 NLGN1Q8N2Q7 840 aa16.48■□□□□ 0.23
CDCA3-210ENST00000545368 MYD88Q99836 296 aa16.48■□□□□ 0.23
CDCA3-210ENST00000545368 BCL2L12Q9HB09 334 aa16.48■□□□□ 0.23
CDCA3-210ENST00000545368 ABCC4O15439 1325 aa16.47■□□□□ 0.23
CDCA3-210ENST00000545368 PLIN1O60240 522 aa16.47■□□□□ 0.23
CDCA3-210ENST00000545368 TCIRG1Q13488 830 aa16.47■□□□□ 0.23
CDCA3-210ENST00000545368 FKBP8Q14318 412 aa16.47■□□□□ 0.23
CDCA3-210ENST00000545368 DZIP1LQ8IYY4 767 aaKnown RBP16.47■□□□□ 0.23
CDCA3-210ENST00000545368 CLUAP1Q96AJ1 413 aa16.47■□□□□ 0.23
CDCA3-210ENST00000545368 SUPT16HQ9Y5B9 1047 aaKnown RBP16.47■□□□□ 0.23
CDCA3-210ENST00000545368 CCT4P50991 539 aaKnown RBP16.46■□□□□ 0.23
CDCA3-210ENST00000545368 PARP10Q53GL7 1025 aa16.46■□□□□ 0.23
CDCA3-210ENST00000545368 TBC1D9BQ66K14 1250 aa16.46■□□□□ 0.23
CDCA3-210ENST00000545368 MSL1Q68DK7 614 aa16.46■□□□□ 0.23
CDCA3-210ENST00000545368 BICDL1Q6ZP65 573 aa16.46■□□□□ 0.23
CDCA3-210ENST00000545368 LINS1Q8NG48 757 aa16.46■□□□□ 0.23
CDCA3-210ENST00000545368 SRCIN1Q9C0H9 1055 aa16.46■□□□□ 0.23
CDCA3-210ENST00000545368 NIP7Q9Y221 180 aaKnown RBP eCLIP16.46■□□□□ 0.23
CDCA3-210ENST00000545368 COL24A1Q17RW2 1714 aa16.45■□□□□ 0.22
CDCA3-210ENST00000545368 ATP5J2-PTCD1G3V325 749 aa16.45■□□□□ 0.22
CDCA3-210ENST00000545368 GPTP24298 496 aa16.45■□□□□ 0.22
CDCA3-210ENST00000545368 ZNF34Q8IZ26 560 aa16.45■□□□□ 0.22
CDCA3-210ENST00000545368 SETDB2Q96T68 719 aa16.45■□□□□ 0.22
CDCA3-210ENST00000545368 PDGFDQ9GZP0 370 aaPredicted RBP16.45■□□□□ 0.22
CDCA3-210ENST00000545368 CARMIL3Q8ND23 1372 aa16.45■□□□□ 0.22
CDCA3-210ENST00000545368 PDE3AQ14432 1141 aa16.44■□□□□ 0.22
CDCA3-210ENST00000545368 BEND3Q5T5X7 828 aa16.44■□□□□ 0.22
CDCA3-210ENST00000545368 CCDC191Q8NCU4 936 aa16.44■□□□□ 0.22
CDCA3-210ENST00000545368 ISCA1Q9BUE6 129 aa16.44■□□□□ 0.22
CDCA3-210ENST00000545368 MTFR1LQ9H019 292 aa16.44■□□□□ 0.22
CDCA3-210ENST00000545368 TNNQ9UQP3 1299 aa16.44■□□□□ 0.22
CDCA3-210ENST00000545368 RNF123Q5XPI4 1314 aa16.44■□□□□ 0.22
CDCA3-210ENST00000545368 NEURL1BA8MQ27 555 aa16.43■□□□□ 0.22
CDCA3-210ENST00000545368 ALDH1L1O75891 902 aa16.43■□□□□ 0.22
CDCA3-210ENST00000545368 ZBTB7AO95365 584 aa16.43■□□□□ 0.22
CDCA3-210ENST00000545368 IGKV5-2P06315 115 aa16.43■□□□□ 0.22
CDCA3-210ENST00000545368 TRIM28Q13263 835 aaKnown RBP16.43■□□□□ 0.22
CDCA3-210ENST00000545368 NFIXQ14938 502 aa16.43■□□□□ 0.22
CDCA3-210ENST00000545368 PPP1R42Q7Z4L9 355 aa16.43■□□□□ 0.22
CDCA3-210ENST00000545368 CWC25Q9NXE8 425 aaPredicted RBP16.43■□□□□ 0.22
CDCA3-210ENST00000545368 UBN2Q6ZU65 1347 aa16.43■□□□□ 0.22
CDCA3-210ENST00000545368 IBTKQ9P2D0 1353 aaPredicted RBP16.42■□□□□ 0.22
CDCA3-210ENST00000545368 NPHP1O15259 732 aa16.42■□□□□ 0.22
CDCA3-210ENST00000545368 MMP10P09238 476 aa16.42■□□□□ 0.22
CDCA3-210ENST00000545368 CWF19L2Q2TBE0 894 aaKnown RBP16.42■□□□□ 0.22
CDCA3-210ENST00000545368 INTS3Q68E01 1043 aaKnown RBP16.42■□□□□ 0.22
CDCA3-210ENST00000545368 NLRP10Q86W26 655 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms