RNA–Protein interactions for RNA: ENST00000545358.5

NPIPB3-214, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5

Gene NPIPB3, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-214ENST00000545358 PHLPP1O60346 1717 aa6.92□□□□□ -1.3
NPIPB3-214ENST00000545358 WNK3Q9BYP7 1800 aa6.92□□□□□ -1.3
NPIPB3-214ENST00000545358 KDM6AO15550 1401 aaPredicted RBP6.92□□□□□ -1.3
NPIPB3-214ENST00000545358 SHANK3Q9BYB0 1731 aa6.91□□□□□ -1.3
NPIPB3-214ENST00000545358 ELL2O00472 640 aaPredicted RBP6.91□□□□□ -1.3
NPIPB3-214ENST00000545358 EVI5O60447 810 aa6.91□□□□□ -1.3
NPIPB3-214ENST00000545358 TEFQ10587 303 aa6.91□□□□□ -1.3
NPIPB3-214ENST00000545358 CHRNA2Q15822 529 aa6.91□□□□□ -1.3
NPIPB3-214ENST00000545358 E2F4Q16254 413 aa6.91□□□□□ -1.3
NPIPB3-214ENST00000545358 KRT24Q2M2I5 525 aa6.91□□□□□ -1.3
NPIPB3-214ENST00000545358 CCDC30Q5VVM6 783 aa6.91□□□□□ -1.3
NPIPB3-214ENST00000545358 STK31Q9BXU1 1019 aa6.91□□□□□ -1.3
NPIPB3-214ENST00000545358 RWDD1Q9H446 243 aaPredicted RBP6.91□□□□□ -1.3
NPIPB3-214ENST00000545358 EMILIN3Q9NT22 766 aa6.91□□□□□ -1.3
NPIPB3-214ENST00000545358 PAPPAQ13219 1627 aa6.9□□□□□ -1.3
NPIPB3-214ENST00000545358 LAMB4A4D0S4 1761 aa6.9□□□□□ -1.3
NPIPB3-214ENST00000545358 HSP90AB1P08238 724 aaKnown RBP6.9□□□□□ -1.3
NPIPB3-214ENST00000545358 HDAC1Q13547 482 aaPredicted RBP6.9□□□□□ -1.3
NPIPB3-214ENST00000545358 KRTAP3-3Q9BYR6 98 aa6.9□□□□□ -1.3
NPIPB3-214ENST00000545358 KRTAP3-2Q9BYR7 98 aa6.9□□□□□ -1.3
NPIPB3-214ENST00000545358 ZBTB40Q9NUA8 1239 aa6.9□□□□□ -1.3
NPIPB3-214ENST00000545358 ARIH1Q9Y4X5 557 aaPredicted RBP6.9□□□□□ -1.3
NPIPB3-214ENST00000545358 PCDHB15Q9Y5E8 787 aa6.9□□□□□ -1.3
NPIPB3-214ENST00000545358 PCDH11XQ9BZA7 1347 aa6.9□□□□□ -1.3
NPIPB3-214ENST00000545358 PCDH11YQ9BZA8 1340 aa6.9□□□□□ -1.3
NPIPB3-214ENST00000545358 NRAPQ86VF7 1730 aa6.9□□□□□ -1.31
NPIPB3-214ENST00000545358 BTBD11A6QL63 1104 aa6.89□□□□□ -1.31
NPIPB3-214ENST00000545358 PHKG2P15735 406 aa6.89□□□□□ -1.31
NPIPB3-214ENST00000545358 PTGER2P43116 358 aa6.89□□□□□ -1.31
NPIPB3-214ENST00000545358 EIF4A1P60842 406 aaKnown RBP6.89□□□□□ -1.31
NPIPB3-214ENST00000545358 INTS3Q68E01 1043 aaKnown RBP6.89□□□□□ -1.31
NPIPB3-214ENST00000545358 IFNL2Q8IZJ0 200 aa6.89□□□□□ -1.31
NPIPB3-214ENST00000545358 CARD10Q9BWT7 1032 aa6.89□□□□□ -1.31
NPIPB3-214ENST00000545358 LGR6Q9HBX8 967 aa6.89□□□□□ -1.31
NPIPB3-214ENST00000545358 MIS18AQ9NYP9 233 aa6.89□□□□□ -1.31
NPIPB3-214ENST00000545358 RBM19Q9Y4C8 960 aaKnown RBP6.89□□□□□ -1.31
NPIPB3-214ENST00000545358 HEG1Q9ULI3 1381 aa6.89□□□□□ -1.31
NPIPB3-214ENST00000545358 GLI3P10071 1580 aa6.89□□□□□ -1.31
NPIPB3-214ENST00000545358 UBR2Q8IWV8 1755 aa6.88□□□□□ -1.31
NPIPB3-214ENST00000545358 NWD2Q9ULI1 1742 aa6.88□□□□□ -1.31
NPIPB3-214ENST00000545358 C5P01031 1676 aa6.88□□□□□ -1.31
NPIPB3-214ENST00000545358 LRP6O75581 1613 aa6.88□□□□□ -1.31
NPIPB3-214ENST00000545358 DISP2A7MBM2 1401 aa6.88□□□□□ -1.31
NPIPB3-214ENST00000545358 IGHDP01880 384 aa6.88□□□□□ -1.31
NPIPB3-214ENST00000545358 CCT4P50991 539 aaKnown RBP6.88□□□□□ -1.31
NPIPB3-214ENST00000545358 HDGFL1Q5TGJ6 251 aa6.88□□□□□ -1.31
NPIPB3-214ENST00000545358 MPRIPQ6WCQ1 1025 aa6.88□□□□□ -1.31
NPIPB3-214ENST00000545358 TOM1L2Q6ZVM7 507 aa6.88□□□□□ -1.31
NPIPB3-214ENST00000545358 DCAF5Q96JK2 942 aa6.88□□□□□ -1.31
NPIPB3-214ENST00000545358 ATP10DQ9P241 1426 aa6.87□□□□□ -1.31
NPIPB3-214ENST00000545358 SPDYE16A6NNV3 312 aaPredicted RBP6.87□□□□□ -1.31
NPIPB3-214ENST00000545358 ARHGAP33O14559 1287 aa6.87□□□□□ -1.31
NPIPB3-214ENST00000545358 ZBTB7BO15156 539 aaPredicted RBP6.87□□□□□ -1.31
NPIPB3-214ENST00000545358 IL2RBP14784 551 aa6.87□□□□□ -1.31
NPIPB3-214ENST00000545358 FOSBP53539 338 aa6.87□□□□□ -1.31
NPIPB3-214ENST00000545358 FLIIQ13045 1269 aa6.87□□□□□ -1.31
NPIPB3-214ENST00000545358 ZNF454Q8N9F8 522 aa6.87□□□□□ -1.31
NPIPB3-214ENST00000545358 SLC52A2Q9HAB3 445 aa6.87□□□□□ -1.31
NPIPB3-214ENST00000545358 DPYSL4O14531 572 aa6.86□□□□□ -1.31
NPIPB3-214ENST00000545358 CYP27B1O15528 508 aa6.86□□□□□ -1.31
NPIPB3-214ENST00000545358 TOM1O60784 492 aa6.86□□□□□ -1.31
NPIPB3-214ENST00000545358 PDIA6Q15084 440 aa6.86□□□□□ -1.31
NPIPB3-214ENST00000545358 SMC5Q8IY18 1101 aa6.86□□□□□ -1.31
NPIPB3-214ENST00000545358 FBXW7Q969H0 707 aa6.86□□□□□ -1.31
NPIPB3-214ENST00000545358 GCC1Q96CN9 775 aa6.86□□□□□ -1.31
NPIPB3-214ENST00000545358 TOGARAM1Q9Y4F4 1720 aa6.86□□□□□ -1.31
NPIPB3-214ENST00000545358 TNS2Q63HR2 1409 aa6.85□□□□□ -1.31
NPIPB3-214ENST00000545358 IBTKQ9P2D0 1353 aaPredicted RBP6.85□□□□□ -1.31
NPIPB3-214ENST00000545358 GIGYF1O75420 1035 aaPredicted RBP6.85□□□□□ -1.31
NPIPB3-214ENST00000545358 PHF14O94880 888 aa6.85□□□□□ -1.31
NPIPB3-214ENST00000545358 EVA1CP58658 441 aa6.85□□□□□ -1.31
NPIPB3-214ENST00000545358 LSM11P83369 360 aaKnown RBP eCLIP6.85□□□□□ -1.31
NPIPB3-214ENST00000545358 FKBP5Q13451 457 aaPredicted RBP6.85□□□□□ -1.31
NPIPB3-214ENST00000545358 FAM161AQ3B820 660 aa6.85□□□□□ -1.31
NPIPB3-214ENST00000545358 ZNF790Q6PG37 636 aa6.85□□□□□ -1.31
NPIPB3-214ENST00000545358 G2E3Q7L622 706 aa6.85□□□□□ -1.31
NPIPB3-214ENST00000545358 ZCRB1Q8TBF4 217 aaKnown RBP6.85□□□□□ -1.31
NPIPB3-214ENST00000545358 ZDHHC16Q969W1 377 aa6.85□□□□□ -1.31
NPIPB3-214ENST00000545358 BACH2Q9BYV9 841 aa6.85□□□□□ -1.31
NPIPB3-214ENST00000545358 BCL2L12Q9HB09 334 aa6.85□□□□□ -1.31
NPIPB3-214ENST00000545358 PDZRN3Q9UPQ7 1066 aa6.85□□□□□ -1.31
NPIPB3-214ENST00000545358 ERVV-2B6SEH9 535 aa6.84□□□□□ -1.31
NPIPB3-214ENST00000545358 KCNQ3O43525 872 aa6.84□□□□□ -1.31
NPIPB3-214ENST00000545358 RGS3P49796 1198 aa6.84□□□□□ -1.31
NPIPB3-214ENST00000545358 LARP1Q6PKG0 1096 aaKnown RBP6.84□□□□□ -1.31
NPIPB3-214ENST00000545358 SPNS2Q8IVW8 549 aa6.84□□□□□ -1.31
NPIPB3-214ENST00000545358 RPAP2Q8IXW5 612 aaPredicted RBP6.84□□□□□ -1.31
NPIPB3-214ENST00000545358 TTC5Q8N0Z6 440 aa6.84□□□□□ -1.31
NPIPB3-214ENST00000545358 ANKRD44Q8N8A2 993 aa6.84□□□□□ -1.31
NPIPB3-214ENST00000545358 EPAS1Q99814 870 aa6.84□□□□□ -1.31
NPIPB3-214ENST00000545358 STRN4Q9NRL3 753 aa6.84□□□□□ -1.31
NPIPB3-214ENST00000545358 BTG4Q9NY30 223 aa6.84□□□□□ -1.31
NPIPB3-214ENST00000545358 CHPF2Q9P2E5 772 aa6.84□□□□□ -1.31
NPIPB3-214ENST00000545358 DBF4Q9UBU7 674 aaPredicted RBP6.84□□□□□ -1.31
NPIPB3-214ENST00000545358 KCPQ6ZWJ8 1503 aa6.84□□□□□ -1.31
NPIPB3-214ENST00000545358 ERBB4Q15303 1308 aa6.83□□□□□ -1.32
NPIPB3-214ENST00000545358 SLIT2O94813 1529 aa6.83□□□□□ -1.32
NPIPB3-214ENST00000545358 F6X3S4 739 aa6.83□□□□□ -1.32
NPIPB3-214ENST00000545358 TK2O00142 265 aa6.83□□□□□ -1.32
NPIPB3-214ENST00000545358 HMMRO75330 724 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms