RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 RTF1Q92541 710 aaKnown RBP16.46■□□□□ 0.23
ACTN1-206ENST00000544964 PCNTO95613 3336 aa16.45■□□□□ 0.22
ACTN1-206ENST00000544964 HTATSF1O43719 755 aaKnown RBP16.45■□□□□ 0.22
ACTN1-206ENST00000544964 SNRPA1P09661 255 aaKnown RBP16.45■□□□□ 0.22
ACTN1-206ENST00000544964 CNBD1Q8NA66 436 aa16.45■□□□□ 0.22
ACTN1-206ENST00000544964 NBPF26B4DH59 902 aa16.44■□□□□ 0.22
ACTN1-206ENST00000544964 CCER2I3L3R5 266 aa16.44■□□□□ 0.22
ACTN1-206ENST00000544964 PDE6BP35913 854 aa16.44■□□□□ 0.22
ACTN1-206ENST00000544964 NBPF10Q6P3W6 841 aaKnown RBP16.44■□□□□ 0.22
ACTN1-206ENST00000544964 NBPF15Q8N660 670 aa16.44■□□□□ 0.22
ACTN1-206ENST00000544964 DNAJC5GQ8N7S2 189 aa16.44■□□□□ 0.22
ACTN1-206ENST00000544964 SETDB2Q96T68 719 aa16.44■□□□□ 0.22
ACTN1-206ENST00000544964 RRAGCQ9HB90 399 aa16.44■□□□□ 0.22
ACTN1-206ENST00000544964 ADAMTS8Q9UP79 889 aa16.44■□□□□ 0.22
ACTN1-206ENST00000544964 PDZRN3Q9UPQ7 1066 aa16.44■□□□□ 0.22
ACTN1-206ENST00000544964 FSTL1Q12841 308 aa16.43■□□□□ 0.22
ACTN1-206ENST00000544964 PNISRQ8TF01 805 aaKnown RBP16.43■□□□□ 0.22
ACTN1-206ENST00000544964 ZNF622Q969S3 477 aaKnown RBP eCLIP16.43■□□□□ 0.221e-6■□□□□ 9.9
ACTN1-206ENST00000544964 NUP98P52948 1817 aa16.42■□□□□ 0.22
ACTN1-206ENST00000544964 C16orf71Q8IYS4 520 aaPredicted RBP16.42■□□□□ 0.22
ACTN1-206ENST00000544964 PLEKHF1Q96S99 279 aa16.42■□□□□ 0.22
ACTN1-206ENST00000544964 GLTPD2A6NH11 291 aa16.41■□□□□ 0.22
ACTN1-206ENST00000544964 C21orf2O43822 256 aa16.41■□□□□ 0.22
ACTN1-206ENST00000544964 SRGNP10124 158 aa16.41■□□□□ 0.22
ACTN1-206ENST00000544964 ST5P78524 1137 aa16.41■□□□□ 0.22
ACTN1-206ENST00000544964 HTRA3P83110 453 aa16.41■□□□□ 0.22
ACTN1-206ENST00000544964 CLEC4GQ6UXB4 293 aa16.41■□□□□ 0.22
ACTN1-206ENST00000544964 NPM2Q86SE8 214 aaKnown RBP16.41■□□□□ 0.22
ACTN1-206ENST00000544964 CCDC146Q8IYE0 955 aa16.41■□□□□ 0.22
ACTN1-206ENST00000544964 FAM9BQ8IZU0 186 aa16.41■□□□□ 0.22
ACTN1-206ENST00000544964 LTBP3Q9NS15 1303 aa16.41■□□□□ 0.22
ACTN1-206ENST00000544964 RGL2O15211 777 aa16.4■□□□□ 0.22
ACTN1-206ENST00000544964 TAF7Q15545 349 aaPredicted RBP16.4■□□□□ 0.22
ACTN1-206ENST00000544964 STYK1Q6J9G0 422 aa16.4■□□□□ 0.22
ACTN1-206ENST00000544964 PRPF40BQ6NWY9 871 aaKnown RBP16.4■□□□□ 0.22
ACTN1-206ENST00000544964 MIS18AQ9NYP9 233 aa16.4■□□□□ 0.22
ACTN1-206ENST00000544964 ZNF219Q9P2Y4 722 aaPredicted RBP16.39■□□□□ 0.21
ACTN1-206ENST00000544964 ZNF652Q9Y2D9 606 aa16.39■□□□□ 0.21
ACTN1-206ENST00000544964 POTECB2RU33 542 aa16.38■□□□□ 0.21
ACTN1-206ENST00000544964 IFFO2Q5TF58 517 aa16.38■□□□□ 0.21
ACTN1-206ENST00000544964 NBPF5PQ86XG9 351 aaPredicted RBP16.38■□□□□ 0.21
ACTN1-206ENST00000544964 SMC1BQ8NDV3 1235 aa16.38■□□□□ 0.21
ACTN1-206ENST00000544964 MASTLQ96GX5 879 aa16.38■□□□□ 0.21
ACTN1-206ENST00000544964 THUMPD2Q9BTF0 503 aaKnown RBP16.38■□□□□ 0.21
ACTN1-206ENST00000544964 PNNQ9H307 717 aaKnown RBP16.38■□□□□ 0.21
ACTN1-206ENST00000544964 KLRG2A4D1S0 409 aaPredicted RBP16.37■□□□□ 0.21
ACTN1-206ENST00000544964 NPHP1O15259 732 aa16.37■□□□□ 0.21
ACTN1-206ENST00000544964 C7orf43Q8WVR3 580 aa16.37■□□□□ 0.21
ACTN1-206ENST00000544964 CNKSR1Q969H4 720 aa16.37■□□□□ 0.21
ACTN1-206ENST00000544964 TAOK3Q9H2K8 898 aa16.37■□□□□ 0.21
ACTN1-206ENST00000544964 NIP7Q9Y221 180 aaKnown RBP eCLIP16.37■□□□□ 0.21
ACTN1-206ENST00000544964 MAPK8IP3Q9UPT6 1336 aa16.37■□□□□ 0.21
ACTN1-206ENST00000544964 ABCC12Q96J65 1359 aa16.37■□□□□ 0.21
ACTN1-206ENST00000544964 NEFMP07197 916 aa16.36■□□□□ 0.21
ACTN1-206ENST00000544964 VEGFAP15692 232 aaPredicted RBP16.36■□□□□ 0.21
ACTN1-206ENST00000544964 NFE2L2Q16236 605 aa16.36■□□□□ 0.21
ACTN1-206ENST00000544964 HLFQ16534 295 aa16.36■□□□□ 0.21
ACTN1-206ENST00000544964 SNED1Q8TER0 1413 aa16.36■□□□□ 0.21
ACTN1-206ENST00000544964 EIF4A1P60842 406 aaKnown RBP16.35■□□□□ 0.21
ACTN1-206ENST00000544964 ERFEQ4G0M1 354 aa16.35■□□□□ 0.21
ACTN1-206ENST00000544964 RUNDC1Q96C34 613 aa16.35■□□□□ 0.21
ACTN1-206ENST00000544964 KLRG1Q96E93 195 aa16.35■□□□□ 0.21
ACTN1-206ENST00000544964 SCN4AP35499 1836 aa16.33■□□□□ 0.21
ACTN1-206ENST00000544964 NPR1P16066 1061 aa16.33■□□□□ 0.2
ACTN1-206ENST00000544964 SOGA3Q5TF21 947 aa16.33■□□□□ 0.2
ACTN1-206ENST00000544964 JMYQ8N9B5 988 aa16.33■□□□□ 0.2
ACTN1-206ENST00000544964 RRP7AQ9Y3A4 280 aaKnown RBP16.33■□□□□ 0.2
ACTN1-206ENST00000544964 RIC1Q4ADV7 1423 aa16.33■□□□□ 0.2
ACTN1-206ENST00000544964 FAM177BA6PVY3 158 aa16.32■□□□□ 0.2
ACTN1-206ENST00000544964 CCDC93Q567U6 631 aa16.32■□□□□ 0.2
ACTN1-206ENST00000544964 ANKRD36CQ5JPF3 1778 aa16.32■□□□□ 0.2
ACTN1-206ENST00000544964 OLFM4Q6UX06 510 aa16.32■□□□□ 0.2
ACTN1-206ENST00000544964 TPTE2Q6XPS3 522 aa16.32■□□□□ 0.2
ACTN1-206ENST00000544964 MAP3K15Q6ZN16 1313 aa16.32■□□□□ 0.2
ACTN1-206ENST00000544964 TTLL7Q6ZT98 887 aa16.32■□□□□ 0.2
ACTN1-206ENST00000544964 IBTKQ9P2D0 1353 aaPredicted RBP16.32■□□□□ 0.2
ACTN1-206ENST00000544964 UBN2Q6ZU65 1347 aa16.31■□□□□ 0.2
ACTN1-206ENST00000544964 APAF1O14727 1248 aa16.31■□□□□ 0.2
ACTN1-206ENST00000544964 NEUROD2Q15784 382 aa16.31■□□□□ 0.2
ACTN1-206ENST00000544964 DPY19L2Q6NUT2 758 aa16.31■□□□□ 0.2
ACTN1-206ENST00000544964 ADAMTSL1Q8N6G6 1762 aa16.31■□□□□ 0.2
ACTN1-206ENST00000544964 COL4A5P29400 1685 aa16.3■□□□□ 0.2
ACTN1-206ENST00000544964 ERVV-1B6SEH8 477 aa16.3■□□□□ 0.2
ACTN1-206ENST00000544964 DDNO94850 711 aaPredicted RBP16.3■□□□□ 0.2
ACTN1-206ENST00000544964 CRY2Q49AN0 593 aa16.3■□□□□ 0.2
ACTN1-206ENST00000544964 LRP10Q7Z4F1 713 aa16.3■□□□□ 0.2
ACTN1-206ENST00000544964 LAMB2P55268 1798 aa16.29■□□□□ 0.2
ACTN1-206ENST00000544964 ERBB4Q15303 1308 aa16.29■□□□□ 0.2
ACTN1-206ENST00000544964 TMPOP42166 694 aaKnown RBP16.29■□□□□ 0.2
ACTN1-206ENST00000544964 RIPK4P57078 832 aa16.29■□□□□ 0.2
ACTN1-206ENST00000544964 FKBP4Q02790 459 aaKnown RBP eCLIP16.29■□□□□ 0.2
ACTN1-206ENST00000544964 NUTM1Q86Y26 1132 aa16.29■□□□□ 0.2
ACTN1-206ENST00000544964 NGEFQ8N5V2 710 aa16.29■□□□□ 0.2
ACTN1-206ENST00000544964 ZNF541Q9H0D2 1346 aa16.28■□□□□ 0.2
ACTN1-206ENST00000544964 POTEIP0CG38 1075 aa16.28■□□□□ 0.2
ACTN1-206ENST00000544964 POTEJP0CG39 1038 aa16.28■□□□□ 0.2
ACTN1-206ENST00000544964 MYL6BP14649 208 aa16.28■□□□□ 0.2
ACTN1-206ENST00000544964 ZBTB3Q9H5J0 574 aa16.28■□□□□ 0.2
ACTN1-206ENST00000544964 ZNF277Q9NRM2 450 aaPredicted RBP16.28■□□□□ 0.2
ACTN1-206ENST00000544964 GPTP24298 496 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms