RNA–Protein interactions for RNA: ENST00000544810.5

CNGA1-209, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CNGA1, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-209ENST00000544810 ERBB3P21860 1342 aa5.93□□□□□ -1.46
CNGA1-209ENST00000544810 FBXW7Q969H0 707 aa5.92□□□□□ -1.46
CNGA1-209ENST00000544810 PXDNLA1KZ92 1463 aa5.92□□□□□ -1.46
CNGA1-209ENST00000544810 KCPQ6ZWJ8 1503 aa5.92□□□□□ -1.46
CNGA1-209ENST00000544810 HSP90AA1P07900 732 aaKnown RBP5.91□□□□□ -1.46
CNGA1-209ENST00000544810 SSTR3P32745 418 aaPredicted RBP5.91□□□□□ -1.46
CNGA1-209ENST00000544810 CLCN1P35523 988 aa5.91□□□□□ -1.46
CNGA1-209ENST00000544810 SRPK2P78362 688 aaKnown RBP5.91□□□□□ -1.46
CNGA1-209ENST00000544810 SYTL4Q96C24 671 aaPredicted RBP5.91□□□□□ -1.46
CNGA1-209ENST00000544810 GDPD2Q9HCC8 539 aa5.91□□□□□ -1.46
CNGA1-209ENST00000544810 QRICH2Q9H0J4 1663 aa5.91□□□□□ -1.46
CNGA1-209ENST00000544810 RGPD5Q99666 1765 aa5.91□□□□□ -1.46
CNGA1-209ENST00000544810 KDM2BQ8NHM5 1336 aa5.91□□□□□ -1.46
CNGA1-209ENST00000544810 C9orf131Q5VYM1 1079 aa5.91□□□□□ -1.46
CNGA1-209ENST00000544810 ARHGAP27Q6ZUM4 889 aa5.91□□□□□ -1.46
CNGA1-209ENST00000544810 DDX54Q8TDD1 881 aaKnown RBP5.91□□□□□ -1.46
CNGA1-209ENST00000544810 MS4A3Q96HJ5 214 aa5.91□□□□□ -1.46
CNGA1-209ENST00000544810 MRS2Q9HD23 443 aa5.91□□□□□ -1.46
CNGA1-209ENST00000544810 PRDM10Q9NQV6 1147 aa5.91□□□□□ -1.46
CNGA1-209ENST00000544810 USP54Q70EL1 1684 aa5.91□□□□□ -1.46
CNGA1-209ENST00000544810 SKIV2LQ15477 1246 aaKnown RBP5.9□□□□□ -1.46
CNGA1-209ENST00000544810 CABP1Q9NZU7 370 aa5.9□□□□□ -1.46
CNGA1-209ENST00000544810 BCS1LQ9Y276 419 aa5.9□□□□□ -1.46
CNGA1-209ENST00000544810 VIRMAQ69YN4 1812 aaKnown RBP5.9□□□□□ -1.46
CNGA1-209ENST00000544810 USP47Q96K76 1375 aa5.9□□□□□ -1.46
CNGA1-209ENST00000544810 FOXN1O15353 648 aa5.9□□□□□ -1.46
CNGA1-209ENST00000544810 RRAGCQ9HB90 399 aa5.9□□□□□ -1.46
CNGA1-209ENST00000544810 DOT1LQ8TEK3 1739 aa5.9□□□□□ -1.46
CNGA1-209ENST00000544810 TTC21BQ7Z4L5 1316 aa5.9□□□□□ -1.47
CNGA1-209ENST00000544810 POM121CA8CG34 1229 aa5.9□□□□□ -1.47
CNGA1-209ENST00000544810 GPCPD1Q9NPB8 672 aa5.9□□□□□ -1.47
CNGA1-209ENST00000544810 EIF4G2P78344 907 aaKnown RBP eCLIP5.89□□□□□ -1.47
CNGA1-209ENST00000544810 CALD1Q05682 793 aaKnown RBP5.89□□□□□ -1.47
CNGA1-209ENST00000544810 AMIGO3Q86WK7 504 aa5.89□□□□□ -1.47
CNGA1-209ENST00000544810 DCAF11Q8TEB1 546 aa5.89□□□□□ -1.47
CNGA1-209ENST00000544810 ANKRD24Q8TF21 1146 aa5.89□□□□□ -1.47
CNGA1-209ENST00000544810 KIAA1551Q9HCM1 1747 aa5.89□□□□□ -1.47
CNGA1-209ENST00000544810 TTC21AQ8NDW8 1320 aa5.89□□□□□ -1.47
CNGA1-209ENST00000544810 C5P01031 1676 aa5.89□□□□□ -1.47
CNGA1-209ENST00000544810 MLLT1Q03111 559 aaPredicted RBP5.89□□□□□ -1.47
CNGA1-209ENST00000544810 CCDC184Q52MB2 194 aa5.89□□□□□ -1.47
CNGA1-209ENST00000544810 ABHD8Q96I13 439 aa5.89□□□□□ -1.47
CNGA1-209ENST00000544810 STAC3Q96MF2 364 aa5.89□□□□□ -1.47
CNGA1-209ENST00000544810 RRAGDQ9NQL2 400 aaPredicted RBP5.89□□□□□ -1.47
CNGA1-209ENST00000544810 TOGARAM1Q9Y4F4 1720 aa5.89□□□□□ -1.47
CNGA1-209ENST00000544810 TNRC6CQ9HCJ0 1690 aaKnown RBP5.88□□□□□ -1.47
CNGA1-209ENST00000544810 NSD3Q9BZ95 1437 aa5.88□□□□□ -1.47
CNGA1-209ENST00000544810 HSPA5P11021 654 aaKnown RBP5.88□□□□□ -1.47
CNGA1-209ENST00000544810 CD44P16070 742 aaKnown RBP5.88□□□□□ -1.47
CNGA1-209ENST00000544810 RFX1P22670 979 aa5.88□□□□□ -1.47
CNGA1-209ENST00000544810 HMGB2P26583 209 aaKnown RBP5.88□□□□□ -1.47
CNGA1-209ENST00000544810 TGFB2P61812 414 aa5.88□□□□□ -1.47
CNGA1-209ENST00000544810 MYSM1Q5VVJ2 828 aa5.88□□□□□ -1.47
CNGA1-209ENST00000544810 PNNQ9H307 717 aaKnown RBP5.88□□□□□ -1.47
CNGA1-209ENST00000544810 PKD1L3Q7Z443 1732 aa5.88□□□□□ -1.47
CNGA1-209ENST00000544810 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.88□□□□□ -1.47
CNGA1-209ENST00000544810 A0A0G2JLW4 131 aa5.88□□□□□ -1.47
CNGA1-209ENST00000544810 SMIM5Q71RC9 77 aa5.88□□□□□ -1.47
CNGA1-209ENST00000544810 FAM9BQ8IZU0 186 aa5.88□□□□□ -1.47
CNGA1-209ENST00000544810 CALR3Q96L12 384 aaKnown RBP5.88□□□□□ -1.47
CNGA1-209ENST00000544810 GOLGB1Q14789 3259 aaKnown RBP5.88□□□□□ -1.47
CNGA1-209ENST00000544810 KIAA1210Q9ULL0 1709 aa5.87□□□□□ -1.47
CNGA1-209ENST00000544810 TTLL13PA6NNM8 815 aa5.87□□□□□ -1.47
CNGA1-209ENST00000544810 PHF14O94880 888 aa5.87□□□□□ -1.47
CNGA1-209ENST00000544810 TPM2P07951 284 aa5.87□□□□□ -1.47
CNGA1-209ENST00000544810 ABL2P42684 1182 aa5.87□□□□□ -1.47
CNGA1-209ENST00000544810 CTCFP49711 727 aaPredicted RBP5.87□□□□□ -1.47
CNGA1-209ENST00000544810 RGS19P49795 217 aa5.87□□□□□ -1.47
CNGA1-209ENST00000544810 RRP1P56182 461 aaKnown RBP5.87□□□□□ -1.47
CNGA1-209ENST00000544810 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.87□□□□□ -1.47
CNGA1-209ENST00000544810 PDCL3Q9H2J4 239 aa5.87□□□□□ -1.47
CNGA1-209ENST00000544810 RNF181Q9P0P0 153 aa5.87□□□□□ -1.47
CNGA1-209ENST00000544810 INSRP06213 1382 aa5.87□□□□□ -1.47
CNGA1-209ENST00000544810 KTN1Q86UP2 1357 aaKnown RBP5.87□□□□□ -1.47
CNGA1-209ENST00000544810 PALLDQ8WX93 1383 aa5.87□□□□□ -1.47
CNGA1-209ENST00000544810 C4BP0C0L5 1744 aa5.87□□□□□ -1.47
CNGA1-209ENST00000544810 RFC5P40937 340 aa5.87□□□□□ -1.47
CNGA1-209ENST00000544810 TMUB1Q9BVT8 246 aa5.87□□□□□ -1.47
CNGA1-209ENST00000544810 USP31Q70CQ4 1352 aa5.87□□□□□ -1.47
CNGA1-209ENST00000544810 SPDYE5A6NIY4 337 aa5.86□□□□□ -1.47
CNGA1-209ENST00000544810 MMP10P09238 476 aa5.86□□□□□ -1.47
CNGA1-209ENST00000544810 DPEP1P16444 411 aa5.86□□□□□ -1.47
CNGA1-209ENST00000544810 SSFA2P28290 1259 aa5.86□□□□□ -1.47
CNGA1-209ENST00000544810 CSPP1Q1MSJ5 1256 aa5.86□□□□□ -1.47
CNGA1-209ENST00000544810 GLMNQ92990 594 aa5.86□□□□□ -1.47
CNGA1-209ENST00000544810 NPDC1Q9NQX5 325 aaPredicted RBP5.86□□□□□ -1.47
CNGA1-209ENST00000544810 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.86□□□□□ -1.47
CNGA1-209ENST00000544810 TBC1D12O60347 775 aa5.86□□□□□ -1.47
CNGA1-209ENST00000544810 TSR1Q2NL82 804 aaKnown RBP5.86□□□□□ -1.47
CNGA1-209ENST00000544810 AIDAQ96BJ3 306 aa5.86□□□□□ -1.47
CNGA1-209ENST00000544810 MKRN1Q9UHC7 482 aaKnown RBP5.86□□□□□ -1.47
CNGA1-209ENST00000544810 TRIM35Q9UPQ4 493 aa5.86□□□□□ -1.47
CNGA1-209ENST00000544810 KIF13BQ9NQT8 1826 aa5.86□□□□□ -1.47
CNGA1-209ENST00000544810 AAMPQ13685 434 aa5.85□□□□□ -1.47
CNGA1-209ENST00000544810 MTMR14Q8NCE2 650 aa5.85□□□□□ -1.47
CNGA1-209ENST00000544810 ZCRB1Q8TBF4 217 aaKnown RBP5.85□□□□□ -1.47
CNGA1-209ENST00000544810 DCAF5Q96JK2 942 aa5.85□□□□□ -1.47
CNGA1-209ENST00000544810 ISY1Q9ULR0 285 aaKnown RBP5.85□□□□□ -1.47
CNGA1-209ENST00000544810 MEGF6O75095 1541 aa5.85□□□□□ -1.47
CNGA1-209ENST00000544810 EVI5O60447 810 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms