RNA–Protein interactions for RNA: ENST00000544754.1

LMO3-231, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-231ENST00000544754 ZNF330Q9Y3S2 320 aaPredicted RBP15.84■□□□□ 0.13
LMO3-231ENST00000544754 UBR3Q6ZT12 1888 aa15.84■□□□□ 0.13
LMO3-231ENST00000544754 NUP98P52948 1817 aa15.83■□□□□ 0.12
LMO3-231ENST00000544754 EIF5P55010 431 aaKnown RBP15.83■□□□□ 0.12
LMO3-231ENST00000544754 TXNRD1Q16881 649 aa15.83■□□□□ 0.12
LMO3-231ENST00000544754 RC3H1Q5TC82 1133 aaKnown RBP15.83■□□□□ 0.12
LMO3-231ENST00000544754 ERICH6BQ5W0A0 696 aa15.83■□□□□ 0.12
LMO3-231ENST00000544754 SLC4A10Q6U841 1118 aa15.83■□□□□ 0.12
LMO3-231ENST00000544754 ITPRIPQ8IWB1 547 aa15.83■□□□□ 0.12
LMO3-231ENST00000544754 PROM2Q8N271 834 aa15.83■□□□□ 0.12
LMO3-231ENST00000544754 MAP3K2Q9Y2U5 619 aa15.83■□□□□ 0.12
LMO3-231ENST00000544754 ANKRD36CQ5JPF3 1778 aa15.82■□□□□ 0.12
LMO3-231ENST00000544754 BCORQ6W2J9 1755 aa15.82■□□□□ 0.12
LMO3-231ENST00000544754 ANKRD13DQ6ZTN6 518 aa15.82■□□□□ 0.12
LMO3-231ENST00000544754 RIC3Q7Z5B4 369 aa15.82■□□□□ 0.12
LMO3-231ENST00000544754 PLBD2Q8NHP8 589 aa15.82■□□□□ 0.12
LMO3-231ENST00000544754 ATP10DQ9P241 1426 aa15.82■□□□□ 0.12
LMO3-231ENST00000544754 C4AP0C0L4 1744 aa15.81■□□□□ 0.12
LMO3-231ENST00000544754 COL15A1P39059 1388 aa15.81■□□□□ 0.12
LMO3-231ENST00000544754 CCT4P50991 539 aaKnown RBP15.81■□□□□ 0.12
LMO3-231ENST00000544754 EP400Q96L91 3159 aa15.81■□□□□ 0.12
LMO3-231ENST00000544754 DDX19BQ9UMR2 479 aa15.81■□□□□ 0.12
LMO3-231ENST00000544754 TUBGCP6Q96RT7 1819 aa15.8■□□□□ 0.12
LMO3-231ENST00000544754 RPS6KA4O75676 772 aa15.8■□□□□ 0.12
LMO3-231ENST00000544754 HOXD11P31277 338 aaPredicted RBP15.8■□□□□ 0.12
LMO3-231ENST00000544754 BEND3Q5T5X7 828 aa15.8■□□□□ 0.12
LMO3-231ENST00000544754 ZBTB3Q9H5J0 574 aa15.8■□□□□ 0.12
LMO3-231ENST00000544754 SCN7AQ01118 1682 aa15.79■□□□□ 0.12
LMO3-231ENST00000544754 MAP3K15Q6ZN16 1313 aa15.79■□□□□ 0.12
LMO3-231ENST00000544754 GNPATO15228 680 aa15.79■□□□□ 0.12
LMO3-231ENST00000544754 KIF6Q6ZMV9 814 aa15.79■□□□□ 0.12
LMO3-231ENST00000544754 NPM2Q86SE8 214 aaKnown RBP15.79■□□□□ 0.12
LMO3-231ENST00000544754 DZIP3Q86Y13 1208 aaKnown RBP15.79■□□□□ 0.12
LMO3-231ENST00000544754 METTL22Q9BUU2 404 aaPredicted RBP15.79■□□□□ 0.12
LMO3-231ENST00000544754 SRCIN1Q9C0H9 1055 aa15.79■□□□□ 0.12
LMO3-231ENST00000544754 SF3B2Q13435 895 aaKnown RBP15.78■□□□□ 0.12
LMO3-231ENST00000544754 ARXQ96QS3 562 aa15.78■□□□□ 0.12
LMO3-231ENST00000544754 CAMKK2Q96RR4 588 aa15.78■□□□□ 0.12
LMO3-231ENST00000544754 MYD88Q99836 296 aa15.78■□□□□ 0.12
LMO3-231ENST00000544754 TBC1D2BQ9UPU7 963 aa15.78■□□□□ 0.12
LMO3-231ENST00000544754 ZBTB7BO15156 539 aaPredicted RBP15.77■□□□□ 0.12
LMO3-231ENST00000544754 EN1Q05925 392 aaPredicted RBP15.77■□□□□ 0.12
LMO3-231ENST00000544754 NEXNQ0ZGT2 675 aa15.77■□□□□ 0.12
LMO3-231ENST00000544754 SMIM5Q71RC9 77 aa15.77■□□□□ 0.12
LMO3-231ENST00000544754 LINS1Q8NG48 757 aa15.77■□□□□ 0.12
LMO3-231ENST00000544754 AK7Q96M32 723 aa15.77■□□□□ 0.12
LMO3-231ENST00000544754 RTCBQ9Y3I0 505 aaKnown RBP15.77■□□□□ 0.12
LMO3-231ENST00000544754 A0A087WZG4 1122 aa15.76■□□□□ 0.11
LMO3-231ENST00000544754 ALDH1L1O75891 902 aa15.76■□□□□ 0.11
LMO3-231ENST00000544754 IGKV5-2P06315 115 aa15.76■□□□□ 0.11
LMO3-231ENST00000544754 HMGB2P26583 209 aaKnown RBP15.76■□□□□ 0.11
LMO3-231ENST00000544754 BAG6P46379 1132 aa15.76■□□□□ 0.11
LMO3-231ENST00000544754 EZH2Q15910 746 aaKnown RBP15.76■□□□□ 0.11
LMO3-231ENST00000544754 CWF19L2Q2TBE0 894 aaKnown RBP15.76■□□□□ 0.11
LMO3-231ENST00000544754 GIGYF2Q6Y7W6 1299 aaKnown RBP15.76■□□□□ 0.11
LMO3-231ENST00000544754 AMIGO3Q86WK7 504 aa15.76■□□□□ 0.11
LMO3-231ENST00000544754 ERVV-1B6SEH8 477 aa15.75■□□□□ 0.11
LMO3-231ENST00000544754 CAMTA2O94983 1202 aa15.75■□□□□ 0.11
LMO3-231ENST00000544754 AAMPQ13685 434 aa15.75■□□□□ 0.11
LMO3-231ENST00000544754 HLFQ16534 295 aa15.75■□□□□ 0.11
LMO3-231ENST00000544754 MEIS3Q99687 375 aa15.75■□□□□ 0.11
LMO3-231ENST00000544754 CHMP4BQ9H444 224 aaKnown RBP15.75■□□□□ 0.11
LMO3-231ENST00000544754 ZBTB40Q9NUA8 1239 aa15.75■□□□□ 0.11
LMO3-231ENST00000544754 PPP4R2Q9NY27 417 aa15.75■□□□□ 0.11
LMO3-231ENST00000544754 IBTKQ9P2D0 1353 aaPredicted RBP15.75■□□□□ 0.11
LMO3-231ENST00000544754 NEURL1BA8MQ27 555 aa15.74■□□□□ 0.11
LMO3-231ENST00000544754 ATP5J2-PTCD1G3V325 749 aa15.74■□□□□ 0.11
LMO3-231ENST00000544754 DEFB132Q7Z7B7 95 aa15.74■□□□□ 0.11
LMO3-231ENST00000544754 QSER1Q2KHR3 1735 aa15.74■□□□□ 0.11
LMO3-231ENST00000544754 PHF14O94880 888 aa15.73■□□□□ 0.11
LMO3-231ENST00000544754 TCIRG1Q13488 830 aa15.73■□□□□ 0.11
LMO3-231ENST00000544754 ZNF827Q17R98 1081 aa15.73■□□□□ 0.11
LMO3-231ENST00000544754 CCDC125Q86Z20 511 aa15.73■□□□□ 0.11
LMO3-231ENST00000544754 AKT1S1Q96B36 256 aa15.73■□□□□ 0.11
LMO3-231ENST00000544754 ISCA1Q9BUE6 129 aa15.73■□□□□ 0.11
LMO3-231ENST00000544754 USP44Q9H0E7 712 aa15.73■□□□□ 0.11
LMO3-231ENST00000544754 HSP90AB3PQ58FF7 597 aa15.72■□□□□ 0.11
LMO3-231ENST00000544754 TRAPPC3LQ5T215 181 aa15.72■□□□□ 0.11
LMO3-231ENST00000544754 ARHGEF1Q92888 912 aaKnown RBP15.72■□□□□ 0.11
LMO3-231ENST00000544754 NARFQ9UHQ1 456 aa15.72■□□□□ 0.11
LMO3-231ENST00000544754 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.71■□□□□ 0.11
LMO3-231ENST00000544754 GNAI3P08754 354 aa15.71■□□□□ 0.11
LMO3-231ENST00000544754 SSFA2P28290 1259 aa15.71■□□□□ 0.11
LMO3-231ENST00000544754 TRIM28Q13263 835 aaKnown RBP15.71■□□□□ 0.11
LMO3-231ENST00000544754 GCKRQ14397 625 aa15.71■□□□□ 0.11
LMO3-231ENST00000544754 C1orf115Q9H7X2 142 aa15.71■□□□□ 0.11
LMO3-231ENST00000544754 SRP68Q9UHB9 627 aaKnown RBP15.71■□□□□ 0.11
LMO3-231ENST00000544754 PCDHB15Q9Y5E8 787 aa15.71■□□□□ 0.11
LMO3-231ENST00000544754 UTYO14607 1347 aa15.7■□□□□ 0.1
LMO3-231ENST00000544754 GRM8O00222 908 aa15.7■□□□□ 0.1
LMO3-231ENST00000544754 RGL2O15211 777 aa15.7■□□□□ 0.1
LMO3-231ENST00000544754 NBPF7P0C2Y1 421 aaPredicted RBP15.7■□□□□ 0.1
LMO3-231ENST00000544754 GPTP24298 496 aa15.7■□□□□ 0.1
LMO3-231ENST00000544754 USPL1Q5W0Q7 1092 aa15.7■□□□□ 0.1
LMO3-231ENST00000544754 ZNF34Q8IZ26 560 aa15.7■□□□□ 0.1
LMO3-231ENST00000544754 CCDC191Q8NCU4 936 aa15.7■□□□□ 0.1
LMO3-231ENST00000544754 BCL2L12Q9HB09 334 aa15.7■□□□□ 0.1
LMO3-231ENST00000544754 C9orf78Q9NZ63 289 aaPredicted RBP15.7■□□□□ 0.1
LMO3-231ENST00000544754 USP42Q9H9J4 1324 aaKnown RBP15.69■□□□□ 0.1
LMO3-231ENST00000544754 COL24A1Q17RW2 1714 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms