RNA–Protein interactions for RNA: ENST00000544724.5

PSMD9-211, Transcript of proteasome 26S subunit, non-ATPase 9, humanhuman

TSL 2

Gene PSMD9, Length 3,051 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD9-211ENST00000544724 NCBP1Q09161 790 aaKnown RBP11.25□□□□□ -0.61
PSMD9-211ENST00000544724 UVSSAQ2YD98 709 aa11.25□□□□□ -0.61
PSMD9-211ENST00000544724 CCDC144BQ3MJ40 725 aa11.25□□□□□ -0.61
PSMD9-211ENST00000544724 HDGFL1Q5TGJ6 251 aa11.25□□□□□ -0.61
PSMD9-211ENST00000544724 CCDC144CPQ8IYA2 1237 aa11.25□□□□□ -0.61
PSMD9-211ENST00000544724 LRRC2Q9BYS8 371 aa11.25□□□□□ -0.61
PSMD9-211ENST00000544724 FTOQ9C0B1 505 aaKnown RBP eCLIP11.25□□□□□ -0.61
PSMD9-211ENST00000544724 SIL1Q9H173 461 aa11.25□□□□□ -0.61
PSMD9-211ENST00000544724 CRB1P82279 1406 aa11.25□□□□□ -0.61
PSMD9-211ENST00000544724 KIF24Q5T7B8 1368 aa11.25□□□□□ -0.61
PSMD9-211ENST00000544724 CCDC192P0DO97 292 aa11.25□□□□□ -0.61
PSMD9-211ENST00000544724 CBX8Q9HC52 389 aa11.25□□□□□ -0.61
PSMD9-211ENST00000544724 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.25□□□□□ -0.61
PSMD9-211ENST00000544724 TTC21BQ7Z4L5 1316 aa11.25□□□□□ -0.61
PSMD9-211ENST00000544724 GOLGA6L4A6NEF3 574 aa11.24□□□□□ -0.61
PSMD9-211ENST00000544724 TNNT1P13805 278 aa11.24□□□□□ -0.61
PSMD9-211ENST00000544724 KLHDC4Q8TBB5 520 aa11.24□□□□□ -0.61
PSMD9-211ENST00000544724 CCDC8Q9H0W5 538 aaPredicted RBP11.24□□□□□ -0.61
PSMD9-211ENST00000544724 EDC4Q6P2E9 1401 aaKnown RBP11.24□□□□□ -0.61
PSMD9-211ENST00000544724 ALKQ9UM73 1620 aa11.24□□□□□ -0.61
PSMD9-211ENST00000544724 ARAP3Q8WWN8 1544 aa11.24□□□□□ -0.61
PSMD9-211ENST00000544724 HECW2Q9P2P5 1572 aa11.24□□□□□ -0.61
PSMD9-211ENST00000544724 TRERF1Q96PN7 1200 aa11.24□□□□□ -0.61
PSMD9-211ENST00000544724 NUP62CLQ9H1M0 184 aa11.24□□□□□ -0.61
PSMD9-211ENST00000544724 TNMDQ9H2S6 317 aa11.24□□□□□ -0.61
PSMD9-211ENST00000544724 CDK12Q9NYV4 1490 aaPredicted RBP11.24□□□□□ -0.61
PSMD9-211ENST00000544724 PI4KAP2A4QPH2 592 aa11.24□□□□□ -0.61
PSMD9-211ENST00000544724 JAK2O60674 1132 aa11.24□□□□□ -0.61
PSMD9-211ENST00000544724 RAB11FIP3O75154 756 aa11.24□□□□□ -0.61
PSMD9-211ENST00000544724 NR1I2O75469 434 aa11.24□□□□□ -0.61
PSMD9-211ENST00000544724 CCDC30Q5VVM6 783 aa11.24□□□□□ -0.61
PSMD9-211ENST00000544724 LARP1Q6PKG0 1096 aaKnown RBP11.24□□□□□ -0.61
PSMD9-211ENST00000544724 FILIP1Q7Z7B0 1213 aa11.24□□□□□ -0.61
PSMD9-211ENST00000544724 PI4KAP1Q8N8J0 262 aa11.24□□□□□ -0.61
PSMD9-211ENST00000544724 IL17REQ8NFR9 667 aa11.24□□□□□ -0.61
PSMD9-211ENST00000544724 BICD2Q8TD16 824 aa11.24□□□□□ -0.61
PSMD9-211ENST00000544724 SLC26A8Q96RN1 970 aa11.24□□□□□ -0.61
PSMD9-211ENST00000544724 RIMS1Q86UR5 1692 aaKnown RBP11.23□□□□□ -0.61
PSMD9-211ENST00000544724 ERICH4A6NGS2 130 aa11.23□□□□□ -0.61
PSMD9-211ENST00000544724 GTF2F1P35269 517 aaKnown RBP eCLIP11.23□□□□□ -0.61
PSMD9-211ENST00000544724 TPD52L1Q16890 204 aaPredicted RBP11.23□□□□□ -0.61
PSMD9-211ENST00000544724 CNTROBQ8N137 903 aa11.23□□□□□ -0.61
PSMD9-211ENST00000544724 CACTINQ8WUQ7 758 aaKnown RBP11.23□□□□□ -0.61
PSMD9-211ENST00000544724 STAP2Q9UGK3 403 aa11.23□□□□□ -0.61
PSMD9-211ENST00000544724 HAP1P54257 671 aaPredicted RBP11.23□□□□□ -0.61
PSMD9-211ENST00000544724 MAP3K11Q16584 847 aa11.23□□□□□ -0.61
PSMD9-211ENST00000544724 CHPF2Q9P2E5 772 aa11.23□□□□□ -0.61
PSMD9-211ENST00000544724 KIF20BQ96Q89 1820 aa11.23□□□□□ -0.61
PSMD9-211ENST00000544724 CPSF1Q10570 1443 aaKnown RBP11.23□□□□□ -0.61
PSMD9-211ENST00000544724 ATP7BP35670 1465 aa11.23□□□□□ -0.61
PSMD9-211ENST00000544724 TLR7Q9NYK1 1049 aaKnown RBP11.22□□□□□ -0.61
PSMD9-211ENST00000544724 CDC42BPGQ6DT37 1551 aa11.22□□□□□ -0.61
PSMD9-211ENST00000544724 VGLL3A8MV65 326 aa11.22□□□□□ -0.61
PSMD9-211ENST00000544724 CWF19L2Q2TBE0 894 aaKnown RBP11.22□□□□□ -0.61
PSMD9-211ENST00000544724 TMEM87AQ8NBN3 555 aa11.22□□□□□ -0.61
PSMD9-211ENST00000544724 RBM33Q96EV2 1170 aaKnown RBP11.22□□□□□ -0.61
PSMD9-211ENST00000544724 BOLA2Q9H3K6 86 aa11.22□□□□□ -0.61
PSMD9-211ENST00000544724 NAP1L2Q9ULW6 460 aaPredicted RBP11.22□□□□□ -0.61
PSMD9-211ENST00000544724 USP16Q9Y5T5 823 aa11.22□□□□□ -0.61
PSMD9-211ENST00000544724 CYP46A1Q9Y6A2 500 aa11.22□□□□□ -0.61
PSMD9-211ENST00000544724 PTPN21Q16825 1174 aa11.22□□□□□ -0.61
PSMD9-211ENST00000544724 FAM200AQ8TCP9 573 aa11.22□□□□□ -0.61
PSMD9-211ENST00000544724 RBM8AQ9Y5S9 174 aaKnown RBP11.22□□□□□ -0.61
PSMD9-211ENST00000544724 PRAMEF22A3QJZ6 481 aa11.21□□□□□ -0.61
PSMD9-211ENST00000544724 SLFNL1Q499Z3 407 aa11.21□□□□□ -0.61
PSMD9-211ENST00000544724 ZSCAN25Q6NSZ9 544 aa11.21□□□□□ -0.61
PSMD9-211ENST00000544724 SPATA32Q96LK8 384 aa11.21□□□□□ -0.61
PSMD9-211ENST00000544724 CLIP2Q9UDT6 1046 aa11.21□□□□□ -0.61
PSMD9-211ENST00000544724 AIMP1Q12904 312 aaKnown RBP11.21□□□□□ -0.62
PSMD9-211ENST00000544724 AACSQ86V21 672 aa11.21□□□□□ -0.62
PSMD9-211ENST00000544724 SSH3Q8TE77 659 aa11.21□□□□□ -0.62
PSMD9-211ENST00000544724 LGR6Q9HBX8 967 aa11.21□□□□□ -0.62
PSMD9-211ENST00000544724 ANKRD26Q9UPS8 1709 aa11.21□□□□□ -0.62
PSMD9-211ENST00000544724 ZNF165P49910 485 aa11.2□□□□□ -0.62
PSMD9-211ENST00000544724 GUCY1B3Q02153 619 aa11.2□□□□□ -0.62
PSMD9-211ENST00000544724 ATP6V1DQ9Y5K8 247 aa11.2□□□□□ -0.62
PSMD9-211ENST00000544724 AATKQ6ZMQ8 1374 aa11.2□□□□□ -0.62
PSMD9-211ENST00000544724 KRT85P78386 507 aa11.2□□□□□ -0.62
PSMD9-211ENST00000544724 NMIQ13287 307 aaPredicted RBP11.2□□□□□ -0.62
PSMD9-211ENST00000544724 ANKRD7Q92527 254 aa11.2□□□□□ -0.62
PSMD9-211ENST00000544724 MLH3Q9UHC1 1453 aa11.2□□□□□ -0.62
PSMD9-211ENST00000544724 LETM1O95202 739 aaPredicted RBP11.2□□□□□ -0.62
PSMD9-211ENST00000544724 REREQ9P2R6 1566 aa11.19□□□□□ -0.62
PSMD9-211ENST00000544724 A0A0D9SFI3 127 aa11.19□□□□□ -0.62
PSMD9-211ENST00000544724 GOLGA6L6A8MZA4 724 aa11.19□□□□□ -0.62
PSMD9-211ENST00000544724 IFIT2P09913 472 aaKnown RBP11.19□□□□□ -0.62
PSMD9-211ENST00000544724 CREB3L3Q68CJ9 461 aa11.19□□□□□ -0.62
PSMD9-211ENST00000544724 C11orf57Q6ZUT1 292 aaPredicted RBP11.19□□□□□ -0.62
PSMD9-211ENST00000544724 NGDNQ8NEJ9 315 aaKnown RBP11.19□□□□□ -0.62
PSMD9-211ENST00000544724 KIF1BPQ96EK5 621 aa11.19□□□□□ -0.62
PSMD9-211ENST00000544724 PGBD1Q96JS3 809 aa11.19□□□□□ -0.62
PSMD9-211ENST00000544724 ZNF215Q9UL58 517 aaPredicted RBP11.19□□□□□ -0.62
PSMD9-211ENST00000544724 GNAT3A8MTJ3 354 aa11.19□□□□□ -0.62
PSMD9-211ENST00000544724 ZNF75DP51815 510 aa11.19□□□□□ -0.62
PSMD9-211ENST00000544724 PROSER3Q2NL68 480 aa11.19□□□□□ -0.62
PSMD9-211ENST00000544724 UTP14CQ5TAP6 766 aaKnown RBP11.19□□□□□ -0.62
PSMD9-211ENST00000544724 CCDC129Q6ZRS4 1044 aa11.19□□□□□ -0.62
PSMD9-211ENST00000544724 LRRN4CLQ8ND94 238 aa11.19□□□□□ -0.62
PSMD9-211ENST00000544724 CCDC112Q8NEF3 446 aa11.19□□□□□ -0.62
PSMD9-211ENST00000544724 PIP4K2AP48426 406 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms