RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 RPGRIP1LQ68CZ1 1315 aa9.03□□□□□ -0.96
CPSF7-222ENST00000544585 LRPPRCP42704 1394 aaKnown RBP9.02□□□□□ -0.97
CPSF7-222ENST00000544585 FOXO3O43524 673 aa9.02□□□□□ -0.97
CPSF7-222ENST00000544585 NBPF14Q5TI25 921 aa9.02□□□□□ -0.97
CPSF7-222ENST00000544585 PHLDB3Q6NSJ2 640 aa9.02□□□□□ -0.97
CPSF7-222ENST00000544585 EVA1BQ9NVM1 165 aa9.02□□□□□ -0.97
CPSF7-222ENST00000544585 HPS5Q9UPZ3 1129 aa9.02□□□□□ -0.97
CPSF7-222ENST00000544585 NHSL1Q5SYE7 1610 aa9.02□□□□□ -0.97
CPSF7-222ENST00000544585 APLP1P51693 650 aa9.01□□□□□ -0.97
CPSF7-222ENST00000544585 EML3Q32P44 896 aa9.01□□□□□ -0.97
CPSF7-222ENST00000544585 MAP7D1Q3KQU3 841 aa9.01□□□□□ -0.97
CPSF7-222ENST00000544585 ANKMY2Q8IV38 441 aa9.01□□□□□ -0.97
CPSF7-222ENST00000544585 SETBP1Q9Y6X0 1596 aa9.01□□□□□ -0.97
CPSF7-222ENST00000544585 BCL9LQ86UU0 1499 aa9.01□□□□□ -0.97
CPSF7-222ENST00000544585 UNC13BO14795 1591 aa9□□□□□ -0.97
CPSF7-222ENST00000544585 BLMP54132 1417 aaPredicted RBP9□□□□□ -0.97
CPSF7-222ENST00000544585 KCNH2Q12809 1159 aa9□□□□□ -0.97
CPSF7-222ENST00000544585 CLP1Q92989 425 aaKnown RBP9□□□□□ -0.97
CPSF7-222ENST00000544585 NUDT12Q9BQG2 462 aa9□□□□□ -0.97
CPSF7-222ENST00000544585 TSR3Q9UJK0 312 aaKnown RBP9□□□□□ -0.97
CPSF7-222ENST00000544585 SOWAHBA6NEL2 793 aa8.99□□□□□ -0.97
CPSF7-222ENST00000544585 ERCC3P19447 782 aa8.99□□□□□ -0.97
CPSF7-222ENST00000544585 ITGAEP38570 1179 aa8.99□□□□□ -0.97
CPSF7-222ENST00000544585 MSS51Q4VC12 460 aa8.99□□□□□ -0.97
CPSF7-222ENST00000544585 ADGRD1Q6QNK2 874 aa8.99□□□□□ -0.97
CPSF7-222ENST00000544585 DEFB132Q7Z7B7 95 aa8.99□□□□□ -0.97
CPSF7-222ENST00000544585 TRIM50Q86XT4 487 aa8.99□□□□□ -0.97
CPSF7-222ENST00000544585 PHTF2Q8N3S3 785 aa8.99□□□□□ -0.97
CPSF7-222ENST00000544585 OGFOD1Q8N543 542 aa8.99□□□□□ -0.97
CPSF7-222ENST00000544585 ARHGAP9Q9BRR9 750 aa8.99□□□□□ -0.97
CPSF7-222ENST00000544585 E9PCH4 1651 aa8.99□□□□□ -0.97
CPSF7-222ENST00000544585 ROBO2Q9HCK4 1378 aa8.99□□□□□ -0.97
CPSF7-222ENST00000544585 HFM1A2PYH4 1435 aa8.98□□□□□ -0.97
CPSF7-222ENST00000544585 XRN1Q8IZH2 1706 aaKnown RBP8.98□□□□□ -0.97
CPSF7-222ENST00000544585 FAM205CA6NFA0 338 aa8.98□□□□□ -0.97
CPSF7-222ENST00000544585 ATP2B4P23634 1241 aa8.98□□□□□ -0.97
CPSF7-222ENST00000544585 ATP1A2P50993 1020 aa8.98□□□□□ -0.97
CPSF7-222ENST00000544585 PSME1Q06323 249 aa8.98□□□□□ -0.97
CPSF7-222ENST00000544585 DPYDQ12882 1025 aa8.98□□□□□ -0.97
CPSF7-222ENST00000544585 SWI5Q1ZZU3 235 aa8.98□□□□□ -0.97
CPSF7-222ENST00000544585 SEPT12Q8IYM1 358 aa8.98□□□□□ -0.97
CPSF7-222ENST00000544585 DXOO77932 396 aaKnown RBP8.97□□□□□ -0.97
CPSF7-222ENST00000544585 BAG6P46379 1132 aa8.97□□□□□ -0.97
CPSF7-222ENST00000544585 VPS72Q15906 364 aa8.97□□□□□ -0.97
CPSF7-222ENST00000544585 KRT28Q7Z3Y7 464 aa8.97□□□□□ -0.97
CPSF7-222ENST00000544585 KRT27Q7Z3Y8 459 aa8.97□□□□□ -0.97
CPSF7-222ENST00000544585 ZBTB33Q86T24 672 aa8.97□□□□□ -0.97
CPSF7-222ENST00000544585 ADAM32Q8TC27 787 aa8.97□□□□□ -0.97
CPSF7-222ENST00000544585 ZNF594Q96JF6 807 aaPredicted RBP8.97□□□□□ -0.97
CPSF7-222ENST00000544585 SPSB2Q99619 263 aa8.97□□□□□ -0.97
CPSF7-222ENST00000544585 NOD1Q9Y239 953 aa8.97□□□□□ -0.97
CPSF7-222ENST00000544585 IQGAP3Q86VI3 1631 aa8.96□□□□□ -0.98
CPSF7-222ENST00000544585 RBM47A0AV96 593 aaKnown RBP8.96□□□□□ -0.98
CPSF7-222ENST00000544585 SOWAHDA6NJG2 315 aa8.96□□□□□ -0.98
CPSF7-222ENST00000544585 BCAMP50895 628 aa8.96□□□□□ -0.98
CPSF7-222ENST00000544585 XPCQ01831 940 aaPredicted RBP8.96□□□□□ -0.98
CPSF7-222ENST00000544585 DZIP3Q86Y13 1208 aaKnown RBP8.96□□□□□ -0.98
CPSF7-222ENST00000544585 MARVELD3Q96A59 401 aa8.96□□□□□ -0.98
CPSF7-222ENST00000544585 OCSTAMPQ9BR26 566 aa8.96□□□□□ -0.98
CPSF7-222ENST00000544585 DNAAF2Q9NVR5 837 aaKnown RBP8.96□□□□□ -0.98
CPSF7-222ENST00000544585 RBM19Q9Y4C8 960 aaKnown RBP8.96□□□□□ -0.98
CPSF7-222ENST00000544585 SPATA31A3Q5VYP0 1347 aa8.96□□□□□ -0.98
CPSF7-222ENST00000544585 MYOM2P54296 1465 aa8.96□□□□□ -0.98
CPSF7-222ENST00000544585 LAMC1P11047 1609 aa8.95□□□□□ -0.98
CPSF7-222ENST00000544585 NRXN3Q9Y4C0 1643 aa8.95□□□□□ -0.98
CPSF7-222ENST00000544585 ST18O60284 1047 aa8.95□□□□□ -0.98
CPSF7-222ENST00000544585 LSM11P83369 360 aaKnown RBP eCLIP8.95□□□□□ -0.98
CPSF7-222ENST00000544585 SIRT1Q96EB6 747 aa8.95□□□□□ -0.98
CPSF7-222ENST00000544585 OTUD5Q96G74 571 aa8.95□□□□□ -0.98
CPSF7-222ENST00000544585 SERPINB4P48594 390 aa8.94□□□□□ -0.98
CPSF7-222ENST00000544585 MMP16P51512 607 aa8.94□□□□□ -0.98
CPSF7-222ENST00000544585 CLDN10P78369 228 aa8.94□□□□□ -0.98
CPSF7-222ENST00000544585 TRAF7Q6Q0C0 670 aa8.94□□□□□ -0.98
CPSF7-222ENST00000544585 WAPLQ7Z5K2 1190 aa8.94□□□□□ -0.98
CPSF7-222ENST00000544585 LARGE2Q8N3Y3 721 aa8.94□□□□□ -0.98
CPSF7-222ENST00000544585 FAM160A2Q8N612 972 aaPredicted RBP8.94□□□□□ -0.98
CPSF7-222ENST00000544585 BIN2Q9UBW5 565 aaPredicted RBP8.94□□□□□ -0.98
CPSF7-222ENST00000544585 DOLKQ9UPQ8 538 aa8.94□□□□□ -0.98
CPSF7-222ENST00000544585 HRO43593 1189 aa8.93□□□□□ -0.98
CPSF7-222ENST00000544585 WNT2BQ93097 391 aa8.93□□□□□ -0.98
CPSF7-222ENST00000544585 STK26Q9P289 416 aa8.93□□□□□ -0.98
CPSF7-222ENST00000544585 PRAG1Q86YV5 1406 aa8.93□□□□□ -0.98
CPSF7-222ENST00000544585 RALGAPBQ86X10 1494 aa8.93□□□□□ -0.98
CPSF7-222ENST00000544585 SLIT2O94813 1529 aa8.93□□□□□ -0.98
CPSF7-222ENST00000544585 COL22A1Q8NFW1 1626 aaPredicted RBP8.92□□□□□ -0.98
CPSF7-222ENST00000544585 MARSP56192 900 aaKnown RBP8.92□□□□□ -0.98
CPSF7-222ENST00000544585 NEXMIFQ5QGS0 1516 aa8.91□□□□□ -0.98
CPSF7-222ENST00000544585 PXDNQ92626 1479 aa8.91□□□□□ -0.98
CPSF7-222ENST00000544585 ABCC11Q96J66 1382 aa8.91□□□□□ -0.98
CPSF7-222ENST00000544585 A0A0G2JS52 829 aa8.91□□□□□ -0.98
CPSF7-222ENST00000544585 FAM83GA6ND36 823 aa8.91□□□□□ -0.98
CPSF7-222ENST00000544585 UNCXA6NJT0 531 aa8.91□□□□□ -0.98
CPSF7-222ENST00000544585 MYT1Q01538 1121 aa8.91□□□□□ -0.98
CPSF7-222ENST00000544585 TSGA10IPQ3SY00 556 aa8.91□□□□□ -0.98
CPSF7-222ENST00000544585 OXLD1Q5BKU9 147 aa8.91□□□□□ -0.98
CPSF7-222ENST00000544585 DNAJC14Q6Y2X3 702 aaPredicted RBP8.91□□□□□ -0.98
CPSF7-222ENST00000544585 CCDC24Q8N4L8 307 aa8.91□□□□□ -0.98
CPSF7-222ENST00000544585 C1orf216Q8TAB5 229 aa8.91□□□□□ -0.98
CPSF7-222ENST00000544585 UNC93B1Q9H1C4 597 aa8.91□□□□□ -0.98
CPSF7-222ENST00000544585 PRDM9Q9NQV7 894 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms