RNA–Protein interactions for RNA: ENST00000544451.2

PCMTD1-208, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PCMTD1, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-208ENST00000544451 ZBTB9Q96C00 473 aa15.69■□□□□ 0.1
PCMTD1-208ENST00000544451 DYNC1I1O14576 645 aa15.69■□□□□ 0.1
PCMTD1-208ENST00000544451 SGSM2O43147 1006 aa15.69■□□□□ 0.1
PCMTD1-208ENST00000544451 ANO6Q4KMQ2 910 aa15.69■□□□□ 0.1
PCMTD1-208ENST00000544451 NMIQ13287 307 aaPredicted RBP15.68■□□□□ 0.1
PCMTD1-208ENST00000544451 PLEKHO1Q53GL0 409 aaPredicted RBP15.68■□□□□ 0.1
PCMTD1-208ENST00000544451 ISM2Q6H9L7 571 aa15.68■□□□□ 0.1
PCMTD1-208ENST00000544451 CHST3Q7LGC8 479 aa15.68■□□□□ 0.1
PCMTD1-208ENST00000544451 ERCC4Q92889 916 aaPredicted RBP15.68■□□□□ 0.1
PCMTD1-208ENST00000544451 INTS4Q96HW7 963 aaKnown RBP15.68■□□□□ 0.1
PCMTD1-208ENST00000544451 RUFY3Q7L099 469 aa15.68■□□□□ 0.1
PCMTD1-208ENST00000544451 CCAR2Q8N163 923 aaKnown RBP15.68■□□□□ 0.1
PCMTD1-208ENST00000544451 MYD88Q99836 296 aa15.68■□□□□ 0.1
PCMTD1-208ENST00000544451 DNAJC25Q9H1X3 360 aa15.68■□□□□ 0.1
PCMTD1-208ENST00000544451 DDX46Q7L014 1031 aaKnown RBP15.67■□□□□ 0.1
PCMTD1-208ENST00000544451 HOMER1Q86YM7 354 aa15.67■□□□□ 0.1
PCMTD1-208ENST00000544451 APPP05067 770 aa15.67■□□□□ 0.1
PCMTD1-208ENST00000544451 MROH2AA6NES4 1674 aa15.67■□□□□ 0.1
PCMTD1-208ENST00000544451 ADGRB3O60242 1522 aa15.67■□□□□ 0.1
PCMTD1-208ENST00000544451 NRDCO43847 1150 aa15.67■□□□□ 0.1
PCMTD1-208ENST00000544451 HSPA4P34932 840 aa15.67■□□□□ 0.1
PCMTD1-208ENST00000544451 FAM177A1Q8N128 213 aaPredicted RBP15.67■□□□□ 0.1
PCMTD1-208ENST00000544451 RAPGEF4Q8WZA2 1011 aa15.67■□□□□ 0.1
PCMTD1-208ENST00000544451 CHMP4AQ9BY43 222 aa15.67■□□□□ 0.1
PCMTD1-208ENST00000544451 PNPLA6Q8IY17 1366 aa15.67■□□□□ 0.1
PCMTD1-208ENST00000544451 A0A087WWV3 80 aa15.66■□□□□ 0.1
PCMTD1-208ENST00000544451 SMC2O95347 1197 aa15.66■□□□□ 0.1
PCMTD1-208ENST00000544451 ZNF165P49910 485 aa15.66■□□□□ 0.1
PCMTD1-208ENST00000544451 CPLX1O14810 134 aa15.66■□□□□ 0.1
PCMTD1-208ENST00000544451 KINO60870 393 aaKnown RBP15.66■□□□□ 0.1
PCMTD1-208ENST00000544451 HS1BP3Q53T59 392 aa15.66■□□□□ 0.1
PCMTD1-208ENST00000544451 ZSCAN31Q96LW9 406 aaPredicted RBP15.66■□□□□ 0.1
PCMTD1-208ENST00000544451 ABCC3O15438 1527 aa15.66■□□□□ 0.1
PCMTD1-208ENST00000544451 UHRF1BP1LA0JNW5 1464 aa15.66■□□□□ 0.1
PCMTD1-208ENST00000544451 BIN1O00499 593 aa15.66■□□□□ 0.1
PCMTD1-208ENST00000544451 MCM5P33992 734 aa15.66■□□□□ 0.1
PCMTD1-208ENST00000544451 CCDC129Q6ZRS4 1044 aa15.66■□□□□ 0.1
PCMTD1-208ENST00000544451 ATP2B1P20020 1258 aa15.65■□□□□ 0.1
PCMTD1-208ENST00000544451 CDC37L1Q7L3B6 337 aa15.65■□□□□ 0.1
PCMTD1-208ENST00000544451 FKBP4Q02790 459 aaKnown RBP eCLIP15.65■□□□□ 0.1
PCMTD1-208ENST00000544451 BRF1Q92994 677 aa15.65■□□□□ 0.1
PCMTD1-208ENST00000544451 PPP6R1Q9UPN7 881 aa15.65■□□□□ 0.1
PCMTD1-208ENST00000544451 CYP2E1P05181 493 aaPredicted RBP15.65■□□□□ 0.1
PCMTD1-208ENST00000544451 CREB3L3Q68CJ9 461 aa15.65■□□□□ 0.1
PCMTD1-208ENST00000544451 MTERF4Q7Z6M4 381 aaKnown RBP15.65■□□□□ 0.1
PCMTD1-208ENST00000544451 ERC1Q8IUD2 1116 aa15.65■□□□□ 0.1
PCMTD1-208ENST00000544451 DBF4Q9UBU7 674 aaPredicted RBP15.65■□□□□ 0.1
PCMTD1-208ENST00000544451 CLIP2Q9UDT6 1046 aa15.65■□□□□ 0.1
PCMTD1-208ENST00000544451 RAD50Q92878 1312 aa15.64■□□□□ 0.09
PCMTD1-208ENST00000544451 HOXC9P31274 260 aa15.64■□□□□ 0.09
PCMTD1-208ENST00000544451 CCDC112Q8NEF3 446 aa15.64■□□□□ 0.09
PCMTD1-208ENST00000544451 ADGRB1O14514 1584 aa15.64■□□□□ 0.09
PCMTD1-208ENST00000544451 SETD1BQ9UPS6 1966 aaKnown RBP15.64■□□□□ 0.09
PCMTD1-208ENST00000544451 PRAMEF22A3QJZ6 481 aa15.64■□□□□ 0.09
PCMTD1-208ENST00000544451 ZNF500O60304 480 aaPredicted RBP15.64■□□□□ 0.09
PCMTD1-208ENST00000544451 TNNT1P13805 278 aa15.64■□□□□ 0.09
PCMTD1-208ENST00000544451 LTKP29376 864 aa15.64■□□□□ 0.09
PCMTD1-208ENST00000544451 LRMPQ12912 555 aa15.64■□□□□ 0.09
PCMTD1-208ENST00000544451 ME3Q16798 604 aa15.64■□□□□ 0.09
PCMTD1-208ENST00000544451 LARP1Q6PKG0 1096 aaKnown RBP15.64■□□□□ 0.09
PCMTD1-208ENST00000544451 SYTL4Q96C24 671 aaPredicted RBP15.64■□□□□ 0.09
PCMTD1-208ENST00000544451 NCOA3Q9Y6Q9 1424 aa15.64■□□□□ 0.09
PCMTD1-208ENST00000544451 LIG1P18858 919 aa15.64■□□□□ 0.09
PCMTD1-208ENST00000544451 UBE3BQ7Z3V4 1068 aa15.64■□□□□ 0.09
PCMTD1-208ENST00000544451 FLT4P35916 1363 aa15.64■□□□□ 0.09
PCMTD1-208ENST00000544451 TYRO3Q06418 890 aa15.63■□□□□ 0.09
PCMTD1-208ENST00000544451 SNRKQ9NRH2 765 aa15.63■□□□□ 0.09
PCMTD1-208ENST00000544451 HAND2P61296 217 aa15.63■□□□□ 0.09
PCMTD1-208ENST00000544451 EVI5LQ96CN4 794 aa15.63■□□□□ 0.09
PCMTD1-208ENST00000544451 SH2B1Q9NRF2 756 aaPredicted RBP15.63■□□□□ 0.09
PCMTD1-208ENST00000544451 JAK2O60674 1132 aa15.63■□□□□ 0.09
PCMTD1-208ENST00000544451 MAPK8IP2Q13387 824 aaPredicted RBP15.62■□□□□ 0.09
PCMTD1-208ENST00000544451 BICC1Q9H694 974 aaKnown RBP15.62■□□□□ 0.09
PCMTD1-208ENST00000544451 PYCARDQ9ULZ3 195 aa15.62■□□□□ 0.09
PCMTD1-208ENST00000544451 SHPRHQ149N8 1683 aa15.62■□□□□ 0.09
PCMTD1-208ENST00000544451 IBTKQ9P2D0 1353 aaPredicted RBP15.62■□□□□ 0.09
PCMTD1-208ENST00000544451 CUL4AQ13619 759 aa15.61■□□□□ 0.09
PCMTD1-208ENST00000544451 PROSER3Q2NL68 480 aa15.61■□□□□ 0.09
PCMTD1-208ENST00000544451 RIOK3O14730 519 aaKnown RBP15.61■□□□□ 0.09
PCMTD1-208ENST00000544451 POLR3DP05423 398 aaPredicted RBP15.61■□□□□ 0.09
PCMTD1-208ENST00000544451 OSBPL3Q9H4L5 887 aa15.61■□□□□ 0.09
PCMTD1-208ENST00000544451 CAMSAP1Q5T5Y3 1602 aa15.61■□□□□ 0.09
PCMTD1-208ENST00000544451 KIAA0232Q92628 1395 aa15.61■□□□□ 0.09
PCMTD1-208ENST00000544451 HSP90AA4PQ58FG1 418 aa15.61■□□□□ 0.09
PCMTD1-208ENST00000544451 NBPF6Q5VWK0 638 aa15.61■□□□□ 0.09
PCMTD1-208ENST00000544451 NBPF4Q96M43 638 aa15.61■□□□□ 0.09
PCMTD1-208ENST00000544451 PHF8Q9UPP1 1060 aa15.61■□□□□ 0.09
PCMTD1-208ENST00000544451 GOLIM4O00461 696 aa15.6■□□□□ 0.09
PCMTD1-208ENST00000544451 U2AF2P26368 475 aaKnown RBP eCLIP15.6■□□□□ 0.094e-7■■■■□ 19.7
PCMTD1-208ENST00000544451 STK38Q15208 465 aa15.6■□□□□ 0.09
PCMTD1-208ENST00000544451 HSP90AB3PQ58FF7 597 aa15.6■□□□□ 0.09
PCMTD1-208ENST00000544451 SCAND2PQ9GZW5 306 aaPredicted RBP15.6■□□□□ 0.09
PCMTD1-208ENST00000544451 TMX1Q9H3N1 280 aa15.6■□□□□ 0.09
PCMTD1-208ENST00000544451 TPCN1Q9ULQ1 816 aa15.6■□□□□ 0.09
PCMTD1-208ENST00000544451 ATP10DQ9P241 1426 aa15.6■□□□□ 0.09
PCMTD1-208ENST00000544451 ANKRD1Q15327 319 aa15.6■□□□□ 0.09
PCMTD1-208ENST00000544451 UVSSAQ2YD98 709 aa15.6■□□□□ 0.09
PCMTD1-208ENST00000544451 FAM200AQ8TCP9 573 aa15.6■□□□□ 0.09
PCMTD1-208ENST00000544451 SSH3Q8TE77 659 aa15.6■□□□□ 0.09
PCMTD1-208ENST00000544451 PIBF1Q8WXW3 757 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms