RNA–Protein interactions for RNA: ENST00000544128.5

SP140-214, Transcript of SP140 nuclear body protein, humanhuman

TSL 3

Gene SP140, Length 910 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-214ENST00000544128 DBF4Q9UBU7 674 aaPredicted RBP12.13□□□□□ -0.47
SP140-214ENST00000544128 CCNL1Q9UK58 526 aaPredicted RBP12.13□□□□□ -0.47
SP140-214ENST00000544128 LY75O60449 1722 aa12.12□□□□□ -0.47
SP140-214ENST00000544128 MYL6BP14649 208 aa12.12□□□□□ -0.47
SP140-214ENST00000544128 CANXP27824 592 aaKnown RBP12.12□□□□□ -0.47
SP140-214ENST00000544128 RRP1P56182 461 aaKnown RBP12.12□□□□□ -0.47
SP140-214ENST00000544128 PROSER3Q2NL68 480 aa12.12□□□□□ -0.47
SP140-214ENST00000544128 G2E3Q7L622 706 aa12.12□□□□□ -0.47
SP140-214ENST00000544128 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.12□□□□□ -0.47
SP140-214ENST00000544128 ANO8Q9HCE9 1232 aaPredicted RBP12.12□□□□□ -0.47
SP140-214ENST00000544128 DDX21Q9NR30 783 aaKnown RBP eCLIP12.12□□□□□ -0.47
SP140-214ENST00000544128 NOB1Q9ULX3 412 aaKnown RBP12.12□□□□□ -0.47
SP140-214ENST00000544128 PLSCR1O15162 318 aa12.11□□□□□ -0.47
SP140-214ENST00000544128 BRPF1P55201 1214 aaPredicted RBP12.11□□□□□ -0.47
SP140-214ENST00000544128 PDIA6Q15084 440 aa12.11□□□□□ -0.47
SP140-214ENST00000544128 LINC00116Q8NCU8 138 aa12.11□□□□□ -0.47
SP140-214ENST00000544128 ARXQ96QS3 562 aa12.11□□□□□ -0.47
SP140-214ENST00000544128 PHAXQ9H814 394 aaKnown RBP12.11□□□□□ -0.47
SP140-214ENST00000544128 HYPKQ9NX55 129 aa12.11□□□□□ -0.47
SP140-214ENST00000544128 ERBB4Q15303 1308 aa12.11□□□□□ -0.47
SP140-214ENST00000544128 RNF123Q5XPI4 1314 aa12.11□□□□□ -0.47
SP140-214ENST00000544128 KIF16BQ96L93 1317 aa12.11□□□□□ -0.47
SP140-214ENST00000544128 ZNF831Q5JPB2 1677 aa12.1□□□□□ -0.47
SP140-214ENST00000544128 NBPF26B4DH59 902 aa12.1□□□□□ -0.47
SP140-214ENST00000544128 RIOK3O14730 519 aaKnown RBP12.1□□□□□ -0.47
SP140-214ENST00000544128 IPO8O15397 1037 aaKnown RBP12.1□□□□□ -0.47
SP140-214ENST00000544128 GTPBP6O43824 516 aaPredicted RBP12.1□□□□□ -0.47
SP140-214ENST00000544128 CRKLP46109 303 aaKnown RBP12.1□□□□□ -0.47
SP140-214ENST00000544128 TXNRD1Q16881 649 aa12.1□□□□□ -0.47
SP140-214ENST00000544128 ZKSCAN2Q63HK3 967 aa12.1□□□□□ -0.47
SP140-214ENST00000544128 NBPF10Q6P3W6 841 aaKnown RBP12.1□□□□□ -0.47
SP140-214ENST00000544128 NBPF15Q8N660 670 aa12.1□□□□□ -0.47
SP140-214ENST00000544128 LRRC4BQ9NT99 713 aa12.1□□□□□ -0.47
SP140-214ENST00000544128 CCDC87Q9NVE4 849 aa12.1□□□□□ -0.47
SP140-214ENST00000544128 CICQ96RK0 1608 aaPredicted RBP12.1□□□□□ -0.47
SP140-214ENST00000544128 CACNA1FO60840 1977 aa12.1□□□□□ -0.47
SP140-214ENST00000544128 AIMP1Q12904 312 aaKnown RBP12.09□□□□□ -0.47
SP140-214ENST00000544128 FLIIQ13045 1269 aa12.09□□□□□ -0.47
SP140-214ENST00000544128 TMEM132AQ24JP5 1023 aa12.09□□□□□ -0.47
SP140-214ENST00000544128 SLC27A3Q5K4L6 730 aa12.09□□□□□ -0.47
SP140-214ENST00000544128 INTS5Q6P9B9 1019 aaKnown RBP12.09□□□□□ -0.47
SP140-214ENST00000544128 TNNQ9UQP3 1299 aa12.09□□□□□ -0.47
SP140-214ENST00000544128 ZBTB1Q9Y2K1 713 aa12.09□□□□□ -0.47
SP140-214ENST00000544128 ZNF330Q9Y3S2 320 aaPredicted RBP12.09□□□□□ -0.47
SP140-214ENST00000544128 COL5A3P25940 1745 aaPredicted RBP12.08□□□□□ -0.47
SP140-214ENST00000544128 IRX6P78412 446 aaPredicted RBP12.08□□□□□ -0.48
SP140-214ENST00000544128 FKBP5Q13451 457 aaPredicted RBP12.08□□□□□ -0.48
SP140-214ENST00000544128 ATF7IPQ6VMQ6 1270 aa12.08□□□□□ -0.48
SP140-214ENST00000544128 COPS6Q7L5N1 327 aa12.08□□□□□ -0.48
SP140-214ENST00000544128 XAGE3Q8WTP9 111 aa12.08□□□□□ -0.48
SP140-214ENST00000544128 ARHGAP45Q92619 1136 aa12.08□□□□□ -0.48
SP140-214ENST00000544128 CLUAP1Q96AJ1 413 aa12.08□□□□□ -0.48
SP140-214ENST00000544128 TAF1LQ8IZX4 1826 aa12.08□□□□□ -0.48
SP140-214ENST00000544128 TRIM27P14373 513 aa12.07□□□□□ -0.48
SP140-214ENST00000544128 RC3H1Q5TC82 1133 aaKnown RBP12.07□□□□□ -0.48
SP140-214ENST00000544128 C20orf194Q5TEA3 1177 aa12.07□□□□□ -0.48
SP140-214ENST00000544128 LRP10Q7Z4F1 713 aa12.07□□□□□ -0.48
SP140-214ENST00000544128 API5Q9BZZ5 524 aaKnown RBP12.07□□□□□ -0.48
SP140-214ENST00000544128 RGPD3A6NKT7 1758 aaPredicted RBP12.07□□□□□ -0.48
SP140-214ENST00000544128 RGPD4Q7Z3J3 1758 aa12.07□□□□□ -0.48
SP140-214ENST00000544128 PTPRCP08575 1304 aa12.07□□□□□ -0.48
SP140-214ENST00000544128 CNTNAP4Q9C0A0 1308 aa12.07□□□□□ -0.48
SP140-214ENST00000544128 MYH14Q7Z406 1995 aaKnown RBP12.07□□□□□ -0.48
SP140-214ENST00000544128 IL6STP40189 918 aaPredicted RBP12.06□□□□□ -0.48
SP140-214ENST00000544128 GPR162Q16538 588 aa12.06□□□□□ -0.48
SP140-214ENST00000544128 TTLL7Q6ZT98 887 aa12.06□□□□□ -0.48
SP140-214ENST00000544128 NPM2Q86SE8 214 aaKnown RBP12.06□□□□□ -0.48
SP140-214ENST00000544128 PANK1Q8TE04 598 aa12.06□□□□□ -0.48
SP140-214ENST00000544128 PI4KAP2A4QPH2 592 aa12.05□□□□□ -0.48
SP140-214ENST00000544128 F6X3S4 739 aa12.05□□□□□ -0.48
SP140-214ENST00000544128 GNPATO15228 680 aa12.05□□□□□ -0.48
SP140-214ENST00000544128 DDX58O95786 925 aaKnown RBP12.05□□□□□ -0.48
SP140-214ENST00000544128 NEFLP07196 543 aa12.05□□□□□ -0.48
SP140-214ENST00000544128 MS4A1P11836 297 aa12.05□□□□□ -0.48
SP140-214ENST00000544128 EIF5P55010 431 aaKnown RBP12.05□□□□□ -0.48
SP140-214ENST00000544128 FTSJ3Q8IY81 847 aaKnown RBP12.05□□□□□ -0.48
SP140-214ENST00000544128 DZIP1LQ8IYY4 767 aaKnown RBP12.05□□□□□ -0.48
SP140-214ENST00000544128 PI4KAP1Q8N8J0 262 aa12.05□□□□□ -0.48
SP140-214ENST00000544128 AK7Q96M32 723 aa12.05□□□□□ -0.48
SP140-214ENST00000544128 C4BP0C0L5 1744 aa12.05□□□□□ -0.48
SP140-214ENST00000544128 RPS6KA4O75676 772 aa12.04□□□□□ -0.48
SP140-214ENST00000544128 RLBP1P12271 317 aa12.04□□□□□ -0.48
SP140-214ENST00000544128 HMGB2P26583 209 aaKnown RBP12.04□□□□□ -0.48
SP140-214ENST00000544128 PDE3AQ14432 1141 aa12.04□□□□□ -0.48
SP140-214ENST00000544128 SLC4A10Q6U841 1118 aa12.04□□□□□ -0.48
SP140-214ENST00000544128 KSR2Q6VAB6 950 aa12.04□□□□□ -0.48
SP140-214ENST00000544128 ANKRD13DQ6ZTN6 518 aa12.04□□□□□ -0.48
SP140-214ENST00000544128 SMIM5Q71RC9 77 aa12.04□□□□□ -0.48
SP140-214ENST00000544128 RIC3Q7Z5B4 369 aa12.04□□□□□ -0.48
SP140-214ENST00000544128 SGIP1Q9BQI5 828 aa12.04□□□□□ -0.48
SP140-214ENST00000544128 MAP3K2Q9Y2U5 619 aa12.04□□□□□ -0.48
SP140-214ENST00000544128 STK25O00506 426 aa12.03□□□□□ -0.48
SP140-214ENST00000544128 HSPA6P17066 643 aa12.03□□□□□ -0.48
SP140-214ENST00000544128 KIF6Q6ZMV9 814 aa12.03□□□□□ -0.48
SP140-214ENST00000544128 PLBD2Q8NHP8 589 aa12.03□□□□□ -0.48
SP140-214ENST00000544128 DNAAF4Q8WXU2 420 aa12.03□□□□□ -0.48
SP140-214ENST00000544128 ZBTB3Q9H5J0 574 aa12.03□□□□□ -0.48
SP140-214ENST00000544128 TBC1D2BQ9UPU7 963 aa12.03□□□□□ -0.48
SP140-214ENST00000544128 RTCBQ9Y3I0 505 aaKnown RBP12.03□□□□□ -0.48
SP140-214ENST00000544128 ADCY9O60503 1353 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms