RNA–Protein interactions for RNA: ENST00000544018.6

LRCOL1-203, Transcript of leucine rich colipase like 1, humanhuman

TSL 5

Gene LRCOL1, Length 825 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCOL1-203ENST00000544018 SOGA3Q5TF21 947 aa22.03■■□□□ 1.12
LRCOL1-203ENST00000544018 GTF2E1P29083 439 aaPredicted RBP22.02■■□□□ 1.12
LRCOL1-203ENST00000544018 EIF4A1P60842 406 aaKnown RBP22.02■■□□□ 1.12
LRCOL1-203ENST00000544018 STYK1Q6J9G0 422 aa22.02■■□□□ 1.12
LRCOL1-203ENST00000544018 KIF6Q6ZMV9 814 aa22.02■■□□□ 1.12
LRCOL1-203ENST00000544018 BABAM1Q9NWV8 329 aa22.02■■□□□ 1.12
LRCOL1-203ENST00000544018 TSPYL4Q9UJ04 414 aa22.02■■□□□ 1.12
LRCOL1-203ENST00000544018 NIP7Q9Y221 180 aaKnown RBP eCLIP22.02■■□□□ 1.12
LRCOL1-203ENST00000544018 ANKRD31Q8N7Z5 1873 aa22.02■■□□□ 1.12
LRCOL1-203ENST00000544018 HSPA6P17066 643 aa22.01■■□□□ 1.11
LRCOL1-203ENST00000544018 NBPF26B4DH59 902 aa22■■□□□ 1.11
LRCOL1-203ENST00000544018 NBPF10Q6P3W6 841 aaKnown RBP22■■□□□ 1.11
LRCOL1-203ENST00000544018 NBPF15Q8N660 670 aa22■■□□□ 1.11
LRCOL1-203ENST00000544018 MASTLQ96GX5 879 aa22■■□□□ 1.11
LRCOL1-203ENST00000544018 ERBB4Q15303 1308 aa22■■□□□ 1.11
LRCOL1-203ENST00000544018 ERVV-1B6SEH8 477 aa21.99■■□□□ 1.11
LRCOL1-203ENST00000544018 THUMPD2Q9BTF0 503 aaKnown RBP21.99■■□□□ 1.11
LRCOL1-203ENST00000544018 NYXQ9GZU5 481 aa21.99■■□□□ 1.11
LRCOL1-203ENST00000544018 RRP7AQ9Y3A4 280 aaKnown RBP21.99■■□□□ 1.11
LRCOL1-203ENST00000544018 TMPOP42166 694 aaKnown RBP21.98■■□□□ 1.11
LRCOL1-203ENST00000544018 RASSF7Q02833 373 aa21.98■■□□□ 1.11
LRCOL1-203ENST00000544018 CCDC24Q8N4L8 307 aa21.98■■□□□ 1.11
LRCOL1-203ENST00000544018 NGEFQ8N5V2 710 aa21.98■■□□□ 1.11
LRCOL1-203ENST00000544018 SRGNP10124 158 aa21.97■■□□□ 1.11
LRCOL1-203ENST00000544018 NMRK2Q9NPI5 230 aa21.97■■□□□ 1.11
LRCOL1-203ENST00000544018 TNRC6CQ9HCJ0 1690 aaKnown RBP21.97■■□□□ 1.11
LRCOL1-203ENST00000544018 C21orf2O43822 256 aa21.96■■□□□ 1.11
LRCOL1-203ENST00000544018 NPR1P16066 1061 aa21.96■■□□□ 1.11
LRCOL1-203ENST00000544018 DPY19L2Q6NUT2 758 aa21.96■■□□□ 1.11
LRCOL1-203ENST00000544018 RUNDC1Q96C34 613 aa21.96■■□□□ 1.11
LRCOL1-203ENST00000544018 MAP3K15Q6ZN16 1313 aa21.96■■□□□ 1.11
LRCOL1-203ENST00000544018 CCDC88AQ3V6T2 1871 aa21.96■■□□□ 1.11
LRCOL1-203ENST00000544018 MYL6BP14649 208 aa21.95■■□□□ 1.1
LRCOL1-203ENST00000544018 RBM46Q8TBY0 533 aaKnown RBP21.95■■□□□ 1.1
LRCOL1-203ENST00000544018 ZNF219Q9P2Y4 722 aaPredicted RBP21.95■■□□□ 1.1
LRCOL1-203ENST00000544018 COL11A2P13942 1736 aaPredicted RBP21.94■■□□□ 1.1
LRCOL1-203ENST00000544018 PRPF40BQ6NWY9 871 aaKnown RBP21.94■■□□□ 1.1
LRCOL1-203ENST00000544018 TAOK3Q9H2K8 898 aa21.94■■□□□ 1.1
LRCOL1-203ENST00000544018 CACNA1SQ13698 1873 aa21.94■■□□□ 1.1
LRCOL1-203ENST00000544018 FAM177BA6PVY3 158 aa21.93■■□□□ 1.1
LRCOL1-203ENST00000544018 ALDH1B1P30837 517 aa21.93■■□□□ 1.1
LRCOL1-203ENST00000544018 APLP1P51693 650 aa21.93■■□□□ 1.1
LRCOL1-203ENST00000544018 NEUROD2Q15784 382 aa21.93■■□□□ 1.1
LRCOL1-203ENST00000544018 LTBP3Q9NS15 1303 aa21.93■■□□□ 1.1
LRCOL1-203ENST00000544018 ARFGEF2Q9Y6D5 1785 aa21.93■■□□□ 1.1
LRCOL1-203ENST00000544018 NUP98P52948 1817 aa21.92■■□□□ 1.1
LRCOL1-203ENST00000544018 GLTPD2A6NH11 291 aa21.92■■□□□ 1.1
LRCOL1-203ENST00000544018 NFKBIEO00221 500 aa21.92■■□□□ 1.1
LRCOL1-203ENST00000544018 FSTL1Q12841 308 aa21.92■■□□□ 1.1
LRCOL1-203ENST00000544018 HLFQ16534 295 aa21.92■■□□□ 1.1
LRCOL1-203ENST00000544018 RRAGCQ9HB90 399 aa21.92■■□□□ 1.1
LRCOL1-203ENST00000544018 FER1L6Q2WGJ9 1857 aa21.92■■□□□ 1.1
LRCOL1-203ENST00000544018 TIAM2Q8IVF5 1701 aa21.92■■□□□ 1.1
LRCOL1-203ENST00000544018 EIF2S2P20042 333 aaKnown RBP21.91■■□□□ 1.1
LRCOL1-203ENST00000544018 ZEB1P37275 1124 aaPredicted RBP21.91■■□□□ 1.1
LRCOL1-203ENST00000544018 ERFEQ4G0M1 354 aa21.91■■□□□ 1.1
LRCOL1-203ENST00000544018 CCDC93Q567U6 631 aa21.91■■□□□ 1.1
LRCOL1-203ENST00000544018 CCDC146Q8IYE0 955 aa21.91■■□□□ 1.1
LRCOL1-203ENST00000544018 VEGFAP15692 232 aaPredicted RBP21.9■■□□□ 1.1
LRCOL1-203ENST00000544018 PRKRIP1Q9H875 184 aaPredicted RBP21.9■■□□□ 1.1
LRCOL1-203ENST00000544018 DICER1Q9UPY3 1922 aaKnown RBP21.9■■□□□ 1.1
LRCOL1-203ENST00000544018 SLX4Q8IY92 1834 aa21.9■■□□□ 1.1
LRCOL1-203ENST00000544018 IBTKQ9P2D0 1353 aaPredicted RBP21.89■■□□□ 1.1
LRCOL1-203ENST00000544018 KLRG2A4D1S0 409 aaPredicted RBP21.89■■□□□ 1.09
LRCOL1-203ENST00000544018 PPP1R42Q7Z4L9 355 aa21.89■■□□□ 1.09
LRCOL1-203ENST00000544018 ZBTB3Q9H5J0 574 aa21.89■■□□□ 1.09
LRCOL1-203ENST00000544018 PARP10Q53GL7 1025 aa21.88■■□□□ 1.09
LRCOL1-203ENST00000544018 GIGYF2Q6Y7W6 1299 aaKnown RBP21.88■■□□□ 1.09
LRCOL1-203ENST00000544018 LAS1LQ9Y4W2 734 aaKnown RBP21.88■■□□□ 1.09
LRCOL1-203ENST00000544018 CALD1Q05682 793 aaKnown RBP21.87■■□□□ 1.09
LRCOL1-203ENST00000544018 HSP90AB3PQ58FF7 597 aa21.87■■□□□ 1.09
LRCOL1-203ENST00000544018 TTLL7Q6ZT98 887 aa21.87■■□□□ 1.09
LRCOL1-203ENST00000544018 RTKN2Q8IZC4 609 aa21.87■■□□□ 1.09
LRCOL1-203ENST00000544018 SMC1BQ8NDV3 1235 aa21.87■■□□□ 1.09
LRCOL1-203ENST00000544018 RPGRQ92834 1020 aaKnown RBP21.87■■□□□ 1.09
LRCOL1-203ENST00000544018 ADAMTS8Q9UP79 889 aa21.87■■□□□ 1.09
LRCOL1-203ENST00000544018 GPTP24298 496 aa21.86■■□□□ 1.09
LRCOL1-203ENST00000544018 TMX4Q9H1E5 349 aaPredicted RBP21.86■■□□□ 1.09
LRCOL1-203ENST00000544018 CC2D2BQ6DHV5 1058 aa21.85■■□□□ 1.09
LRCOL1-203ENST00000544018 CHL1O00533 1208 aa21.84■■□□□ 1.09
LRCOL1-203ENST00000544018 GRIPAP1Q4V328 841 aa21.84■■□□□ 1.09
LRCOL1-203ENST00000544018 RIC1Q4ADV7 1423 aa21.83■■□□□ 1.09
LRCOL1-203ENST00000544018 HOXB7P09629 217 aa21.83■■□□□ 1.09
LRCOL1-203ENST00000544018 FKBP4Q02790 459 aaKnown RBP eCLIP21.83■■□□□ 1.09
LRCOL1-203ENST00000544018 NUTM1Q86Y26 1132 aa21.83■■□□□ 1.09
LRCOL1-203ENST00000544018 ZNF34Q8IZ26 560 aa21.83■■□□□ 1.09
LRCOL1-203ENST00000544018 RNF123Q5XPI4 1314 aa21.82■■□□□ 1.08
LRCOL1-203ENST00000544018 RBM17Q96I25 401 aaKnown RBP21.82■■□□□ 1.08
LRCOL1-203ENST00000544018 DDX21Q9NR30 783 aaKnown RBP eCLIP21.82■■□□□ 1.08
LRCOL1-203ENST00000544018 PRELPP51888 382 aa21.81■■□□□ 1.08
LRCOL1-203ENST00000544018 CRY2Q49AN0 593 aa21.81■■□□□ 1.08
LRCOL1-203ENST00000544018 C7orf43Q8WVR3 580 aa21.81■■□□□ 1.08
LRCOL1-203ENST00000544018 CFAP44Q96MT7 982 aa21.81■■□□□ 1.08
LRCOL1-203ENST00000544018 NLRP3Q96P20 1036 aa21.81■■□□□ 1.08
LRCOL1-203ENST00000544018 UTP14AQ9BVJ6 771 aaKnown RBP21.81■■□□□ 1.08
LRCOL1-203ENST00000544018 CHMP4AQ9BY43 222 aa21.81■■□□□ 1.08
LRCOL1-203ENST00000544018 TRIM35Q9UPQ4 493 aa21.81■■□□□ 1.08
LRCOL1-203ENST00000544018 AIMP1Q12904 312 aaKnown RBP21.8■■□□□ 1.08
LRCOL1-203ENST00000544018 PDIA6Q15084 440 aa21.8■■□□□ 1.08
LRCOL1-203ENST00000544018 SUSD4Q5VX71 490 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms