RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 KIF6Q6ZMV9 814 aa17.49■□□□□ 0.39
SP140-213ENST00000543928 ZNF428Q96B54 188 aa17.48■□□□□ 0.39
SP140-213ENST00000543928 PHAXQ9H814 394 aaKnown RBP17.48■□□□□ 0.39
SP140-213ENST00000543928 BCL2L12Q9HB09 334 aa17.48■□□□□ 0.39
SP140-213ENST00000543928 ATF5Q9Y2D1 282 aaPredicted RBP17.48■□□□□ 0.39
SP140-213ENST00000543928 MAP3K15Q6ZN16 1313 aa17.47■□□□□ 0.39
SP140-213ENST00000543928 FKBP8Q14318 412 aa17.47■□□□□ 0.39
SP140-213ENST00000543928 NLGN1Q8N2Q7 840 aa17.47■□□□□ 0.39
SP140-213ENST00000543928 ZBTB3Q9H5J0 574 aa17.47■□□□□ 0.39
SP140-213ENST00000543928 SCN7AQ01118 1682 aa17.47■□□□□ 0.39
SP140-213ENST00000543928 BCORQ6W2J9 1755 aa17.46■□□□□ 0.39
SP140-213ENST00000543928 NPM3O75607 178 aaKnown RBP17.46■□□□□ 0.39
SP140-213ENST00000543928 G2E3Q7L622 706 aa17.46■□□□□ 0.39
SP140-213ENST00000543928 SSH1Q8WYL5 1049 aa17.46■□□□□ 0.39
SP140-213ENST00000543928 CACNA1FO60840 1977 aa17.46■□□□□ 0.39
SP140-213ENST00000543928 ERVV-1B6SEH8 477 aa17.45■□□□□ 0.38
SP140-213ENST00000543928 HLFQ16534 295 aa17.45■□□□□ 0.38
SP140-213ENST00000543928 BCL2L13Q9BXK5 485 aa17.45■□□□□ 0.38
SP140-213ENST00000543928 SPON1Q9HCB6 807 aa17.45■□□□□ 0.38
SP140-213ENST00000543928 ZNF652Q9Y2D9 606 aa17.45■□□□□ 0.38
SP140-213ENST00000543928 FLIIQ13045 1269 aa17.44■□□□□ 0.38
SP140-213ENST00000543928 ALDH1L2Q3SY69 923 aa17.44■□□□□ 0.38
SP140-213ENST00000543928 CLEC4GQ6UXB4 293 aa17.44■□□□□ 0.38
SP140-213ENST00000543928 ANKRD13DQ6ZTN6 518 aa17.44■□□□□ 0.38
SP140-213ENST00000543928 MRPL50Q8N5N7 158 aaKnown RBP17.44■□□□□ 0.38
SP140-213ENST00000543928 RGL2O15211 777 aa17.43■□□□□ 0.38
SP140-213ENST00000543928 POLD1P28340 1107 aa17.43■□□□□ 0.38
SP140-213ENST00000543928 TBC1D9BQ66K14 1250 aa17.43■□□□□ 0.38
SP140-213ENST00000543928 PLBD2Q8NHP8 589 aa17.43■□□□□ 0.38
SP140-213ENST00000543928 SMC4Q9NTJ3 1288 aa17.43■□□□□ 0.38
SP140-213ENST00000543928 COL24A1Q17RW2 1714 aa17.42■□□□□ 0.38
SP140-213ENST00000543928 DDX58O95786 925 aaKnown RBP17.42■□□□□ 0.38
SP140-213ENST00000543928 MMP10P09238 476 aa17.42■□□□□ 0.38
SP140-213ENST00000543928 PTGER2P43116 358 aa17.42■□□□□ 0.38
SP140-213ENST00000543928 RARSP54136 660 aaKnown RBP17.42■□□□□ 0.38
SP140-213ENST00000543928 NFIXQ14938 502 aa17.42■□□□□ 0.38
SP140-213ENST00000543928 GIGYF2Q6Y7W6 1299 aaKnown RBP17.42■□□□□ 0.38
SP140-213ENST00000543928 BICDL1Q6ZP65 573 aa17.42■□□□□ 0.38
SP140-213ENST00000543928 RIC3Q7Z5B4 369 aa17.42■□□□□ 0.38
SP140-213ENST00000543928 SGIP1Q9BQI5 828 aa17.42■□□□□ 0.38
SP140-213ENST00000543928 NUP98P52948 1817 aa17.42■□□□□ 0.38
SP140-213ENST00000543928 TM4SF1P30408 202 aa17.41■□□□□ 0.38
SP140-213ENST00000543928 FKBP5Q13451 457 aaPredicted RBP17.41■□□□□ 0.38
SP140-213ENST00000543928 DDR1Q08345 913 aa17.4■□□□□ 0.38
SP140-213ENST00000543928 KSR2Q6VAB6 950 aa17.4■□□□□ 0.38
SP140-213ENST00000543928 NIP7Q9Y221 180 aaKnown RBP eCLIP17.4■□□□□ 0.38
SP140-213ENST00000543928 ARFGEF2Q9Y6D5 1785 aa17.39■□□□□ 0.37
SP140-213ENST00000543928 PI4KAP2A4QPH2 592 aa17.39■□□□□ 0.37
SP140-213ENST00000543928 GPTP24298 496 aa17.39■□□□□ 0.37
SP140-213ENST00000543928 HSP90AB3PQ58FF7 597 aa17.39■□□□□ 0.37
SP140-213ENST00000543928 PI4KAP1Q8N8J0 262 aa17.39■□□□□ 0.37
SP140-213ENST00000543928 SETDB2Q96T68 719 aa17.39■□□□□ 0.37
SP140-213ENST00000543928 MAP3K2Q9Y2U5 619 aa17.39■□□□□ 0.37
SP140-213ENST00000543928 PARP3Q9Y6F1 533 aa17.39■□□□□ 0.37
SP140-213ENST00000543928 ADCY9O60503 1353 aa17.39■□□□□ 0.37
SP140-213ENST00000543928 ATP10DQ9P241 1426 aa17.38■□□□□ 0.37
SP140-213ENST00000543928 POLRMTO00411 1230 aaKnown RBP17.38■□□□□ 0.37
SP140-213ENST00000543928 TCIRG1Q13488 830 aa17.38■□□□□ 0.37
SP140-213ENST00000543928 BCAR3O75815 825 aa17.37■□□□□ 0.37
SP140-213ENST00000543928 BRPF1P55201 1214 aaPredicted RBP17.37■□□□□ 0.37
SP140-213ENST00000543928 ZNF34Q8IZ26 560 aa17.37■□□□□ 0.37
SP140-213ENST00000543928 CARMIL3Q8ND23 1372 aa17.37■□□□□ 0.37
SP140-213ENST00000543928 ANKRD36CQ5JPF3 1778 aa17.36■□□□□ 0.37
SP140-213ENST00000543928 F6X3S4 739 aa17.36■□□□□ 0.37
SP140-213ENST00000543928 SERPINB2P05120 415 aa17.36■□□□□ 0.37
SP140-213ENST00000543928 MYD88Q99836 296 aa17.36■□□□□ 0.37
SP140-213ENST00000543928 METTL22Q9BUU2 404 aaPredicted RBP17.36■□□□□ 0.37
SP140-213ENST00000543928 NOB1Q9ULX3 412 aaKnown RBP17.36■□□□□ 0.37
SP140-213ENST00000543928 PTPRCP08575 1304 aa17.36■□□□□ 0.37
SP140-213ENST00000543928 UBN2Q6ZU65 1347 aa17.36■□□□□ 0.37
SP140-213ENST00000543928 LRP5O75197 1615 aa17.36■□□□□ 0.37
SP140-213ENST00000543928 FAM177BA6PVY3 158 aa17.35■□□□□ 0.37
SP140-213ENST00000543928 ATP5J2-PTCD1G3V325 749 aa17.35■□□□□ 0.37
SP140-213ENST00000543928 DNAAF4Q8WXU2 420 aa17.35■□□□□ 0.37
SP140-213ENST00000543928 ISCA1Q9BUE6 129 aa17.35■□□□□ 0.37
SP140-213ENST00000543928 PPP1R1BQ9UD71 204 aaPredicted RBP17.35■□□□□ 0.37
SP140-213ENST00000543928 KIF16BQ96L93 1317 aa17.35■□□□□ 0.37
SP140-213ENST00000543928 NEXNQ0ZGT2 675 aa17.34■□□□□ 0.37
SP140-213ENST00000543928 PARP10Q53GL7 1025 aa17.34■□□□□ 0.37
SP140-213ENST00000543928 NBPF5PQ86XG9 351 aaPredicted RBP17.34■□□□□ 0.37
SP140-213ENST00000543928 RCAN3Q9UKA8 241 aa17.34■□□□□ 0.37
SP140-213ENST00000543928 AFDNP55196 1824 aaKnown RBP17.33■□□□□ 0.37
SP140-213ENST00000543928 SUSD4Q5VX71 490 aa17.33■□□□□ 0.36
SP140-213ENST00000543928 NLRP10Q86W26 655 aa17.33■□□□□ 0.36
SP140-213ENST00000543928 NPHP1O15259 732 aa17.32■□□□□ 0.36
SP140-213ENST00000543928 TRIM28Q13263 835 aaKnown RBP17.32■□□□□ 0.36
SP140-213ENST00000543928 PRR5LQ6MZQ0 368 aa17.32■□□□□ 0.36
SP140-213ENST00000543928 KLHL34Q8N239 644 aa17.32■□□□□ 0.36
SP140-213ENST00000543928 CNBD1Q8NA66 436 aa17.32■□□□□ 0.36
SP140-213ENST00000543928 FRAT1Q92837 279 aaPredicted RBP17.32■□□□□ 0.36
SP140-213ENST00000543928 NRXN2Q9P2S2 1712 aa17.32■□□□□ 0.36
SP140-213ENST00000543928 IBTKQ9P2D0 1353 aaPredicted RBP17.31■□□□□ 0.36
SP140-213ENST00000543928 IPO8O15397 1037 aaKnown RBP17.31■□□□□ 0.36
SP140-213ENST00000543928 IGKV5-2P06315 115 aa17.31■□□□□ 0.36
SP140-213ENST00000543928 SLC4A10Q6U841 1118 aa17.31■□□□□ 0.36
SP140-213ENST00000543928 TPTE2Q6XPS3 522 aa17.31■□□□□ 0.36
SP140-213ENST00000543928 PPP1R42Q7Z4L9 355 aa17.31■□□□□ 0.36
SP140-213ENST00000543928 CCDC24Q8N4L8 307 aa17.31■□□□□ 0.36
SP140-213ENST00000543928 UTP14AQ9BVJ6 771 aaKnown RBP17.31■□□□□ 0.36
SP140-213ENST00000543928 API5Q9BZZ5 524 aaKnown RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms