RNA–Protein interactions for RNA: ENST00000543772.2

PSMC1-202, Transcript of proteasome 26S subunit, ATPase 1, humanhuman

TSL 2 BASIC

Gene PSMC1, Length 1,389 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC1-202ENST00000543772 U2AF1Q01081 240 aaKnown RBP eCLIP11.11□□□□□ -0.63
PSMC1-202ENST00000543772 RSPH6AQ9H0K4 717 aa11.11□□□□□ -0.63
PSMC1-202ENST00000543772 NUDCQ9Y266 331 aa11.11□□□□□ -0.63
PSMC1-202ENST00000543772 U2SURPO15042 1029 aaKnown RBP11.1□□□□□ -0.63
PSMC1-202ENST00000543772 PHACTR3Q96KR7 559 aa11.1□□□□□ -0.63
PSMC1-202ENST00000543772 EPAS1Q99814 870 aa11.1□□□□□ -0.63
PSMC1-202ENST00000543772 NCAPD2Q15021 1401 aa11.09□□□□□ -0.63
PSMC1-202ENST00000543772 KDRP35968 1356 aa11.09□□□□□ -0.63
PSMC1-202ENST00000543772 HMOX1P09601 288 aa11.09□□□□□ -0.63
PSMC1-202ENST00000543772 C1QTNF8P60827 252 aa11.09□□□□□ -0.63
PSMC1-202ENST00000543772 E2F4Q16254 413 aa11.09□□□□□ -0.63
PSMC1-202ENST00000543772 SULT6B1Q6IMI4 303 aa11.09□□□□□ -0.63
PSMC1-202ENST00000543772 USHBP1Q8N6Y0 703 aa11.09□□□□□ -0.63
PSMC1-202ENST00000543772 COL9A1P20849 921 aa11.08□□□□□ -0.64
PSMC1-202ENST00000543772 WDR43Q15061 677 aaKnown RBP eCLIP11.08□□□□□ -0.64
PSMC1-202ENST00000543772 GPR162Q16538 588 aa11.08□□□□□ -0.64
PSMC1-202ENST00000543772 QSER1Q2KHR3 1735 aa11.08□□□□□ -0.64
PSMC1-202ENST00000543772 UTRNP46939 3433 aa11.07□□□□□ -0.64
PSMC1-202ENST00000543772 CCDC146Q8IYE0 955 aa11.07□□□□□ -0.64
PSMC1-202ENST00000543772 TUBGCP6Q96RT7 1819 aa11.07□□□□□ -0.64
PSMC1-202ENST00000543772 KAT6BQ8WYB5 2073 aa11.07□□□□□ -0.64
PSMC1-202ENST00000543772 COL24A1Q17RW2 1714 aa11.07□□□□□ -0.64
PSMC1-202ENST00000543772 PNPLA7Q6ZV29 1317 aa11.06□□□□□ -0.64
PSMC1-202ENST00000543772 SPDYE16A6NNV3 312 aaPredicted RBP11.06□□□□□ -0.64
PSMC1-202ENST00000543772 PRKAR2BP31323 418 aa11.06□□□□□ -0.64
PSMC1-202ENST00000543772 KCNQ4P56696 695 aa11.06□□□□□ -0.64
PSMC1-202ENST00000543772 DDX54Q8TDD1 881 aaKnown RBP11.06□□□□□ -0.64
PSMC1-202ENST00000543772 RUNDC1Q96C34 613 aa11.06□□□□□ -0.64
PSMC1-202ENST00000543772 APAF1O14727 1248 aa11.05□□□□□ -0.64
PSMC1-202ENST00000543772 POLD1P28340 1107 aa11.05□□□□□ -0.64
PSMC1-202ENST00000543772 SLC27A3Q5K4L6 730 aa11.05□□□□□ -0.64
PSMC1-202ENST00000543772 NLGN2Q8NFZ4 835 aa11.05□□□□□ -0.64
PSMC1-202ENST00000543772 SLC16A10Q8TF71 515 aa11.05□□□□□ -0.64
PSMC1-202ENST00000543772 DOT1LQ8TEK3 1739 aa11.05□□□□□ -0.64
PSMC1-202ENST00000543772 FAM208AQ9UK61 1670 aaKnown RBP11.05□□□□□ -0.64
PSMC1-202ENST00000543772 KCTD12Q96CX2 325 aaKnown RBP11.04□□□□□ -0.64
PSMC1-202ENST00000543772 SHANK3Q9BYB0 1731 aa11.04□□□□□ -0.64
PSMC1-202ENST00000543772 LY75O60449 1722 aa11.03□□□□□ -0.64
PSMC1-202ENST00000543772 GIGYF1O75420 1035 aaPredicted RBP11.03□□□□□ -0.64
PSMC1-202ENST00000543772 PRIM1P49642 420 aaKnown RBP11.03□□□□□ -0.64
PSMC1-202ENST00000543772 C6orf132Q5T0Z8 1188 aa11.03□□□□□ -0.64
PSMC1-202ENST00000543772 DDX12PQ92771 950 aa11.03□□□□□ -0.64
PSMC1-202ENST00000543772 SYTL4Q96C24 671 aaPredicted RBP11.03□□□□□ -0.64
PSMC1-202ENST00000543772 TFCP2L1Q9NZI6 479 aa11.03□□□□□ -0.64
PSMC1-202ENST00000543772 TMPOP42166 694 aaKnown RBP11.03□□□□□ -0.64
PSMC1-202ENST00000543772 MTHFSDQ2M296 383 aaKnown RBP11.03□□□□□ -0.64
PSMC1-202ENST00000543772 PROX2Q3B8N5 592 aa11.03□□□□□ -0.64
PSMC1-202ENST00000543772 RGPD2P0DJD1 1756 aa11.02□□□□□ -0.64
PSMC1-202ENST00000543772 MEGF6O75095 1541 aa11.02□□□□□ -0.65
PSMC1-202ENST00000543772 YBX3P16989 372 aaKnown RBP eCLIP11.02□□□□□ -0.65
PSMC1-202ENST00000543772 PNNQ9H307 717 aaKnown RBP11.02□□□□□ -0.65
PSMC1-202ENST00000543772 WDR70Q9NW82 654 aa11.02□□□□□ -0.65
PSMC1-202ENST00000543772 RABGEF1Q9UJ41 708 aa11.02□□□□□ -0.65
PSMC1-202ENST00000543772 CENPBP07199 599 aaPredicted RBP11.01□□□□□ -0.65
PSMC1-202ENST00000543772 NFE2L2Q16236 605 aa11.01□□□□□ -0.65
PSMC1-202ENST00000543772 NBPF3Q9H094 633 aa11.01□□□□□ -0.65
PSMC1-202ENST00000543772 RRP7AQ9Y3A4 280 aaKnown RBP11.01□□□□□ -0.65
PSMC1-202ENST00000543772 ZNF521Q96K83 1311 aa11□□□□□ -0.65
PSMC1-202ENST00000543772 MRPL50Q8N5N7 158 aaKnown RBP11□□□□□ -0.65
PSMC1-202ENST00000543772 CCNL1Q9UK58 526 aaPredicted RBP11□□□□□ -0.65
PSMC1-202ENST00000543772 CYP27B1O15528 508 aa10.99□□□□□ -0.65
PSMC1-202ENST00000543772 HNRNPUQ00839 825 aaKnown RBP eCLIP10.99□□□□□ -0.65
PSMC1-202ENST00000543772 NBR1Q14596 966 aa10.99□□□□□ -0.65
PSMC1-202ENST00000543772 CCDC27Q2M243 656 aa10.99□□□□□ -0.65
PSMC1-202ENST00000543772 PLEKHO1Q53GL0 409 aaPredicted RBP10.99□□□□□ -0.65
PSMC1-202ENST00000543772 MSL1Q68DK7 614 aa10.99□□□□□ -0.65
PSMC1-202ENST00000543772 THSD4Q6ZMP0 1018 aa10.99□□□□□ -0.65
PSMC1-202ENST00000543772 COL23A1Q86Y22 540 aaPredicted RBP10.99□□□□□ -0.65
PSMC1-202ENST00000543772 ZCRB1Q8TBF4 217 aaKnown RBP10.99□□□□□ -0.65
PSMC1-202ENST00000543772 RAPGEF4Q8WZA2 1011 aa10.99□□□□□ -0.65
PSMC1-202ENST00000543772 TSHZ2Q9NRE2 1034 aa10.99□□□□□ -0.65
PSMC1-202ENST00000543772 GOLGB1Q14789 3259 aaKnown RBP10.99□□□□□ -0.65
PSMC1-202ENST00000543772 CEP350Q5VT06 3117 aa10.98□□□□□ -0.65
PSMC1-202ENST00000543772 TATP17735 454 aaPredicted RBP10.98□□□□□ -0.65
PSMC1-202ENST00000543772 RIPK4P57078 832 aa10.98□□□□□ -0.65
PSMC1-202ENST00000543772 AMOTQ4VCS5 1084 aa10.98□□□□□ -0.65
PSMC1-202ENST00000543772 WWC1Q8IX03 1113 aa10.98□□□□□ -0.65
PSMC1-202ENST00000543772 IL17REQ8NFR9 667 aa10.98□□□□□ -0.65
PSMC1-202ENST00000543772 SALL2Q9Y467 1007 aaPredicted RBP10.98□□□□□ -0.65
PSMC1-202ENST00000543772 GRIN3BO60391 1043 aa10.97□□□□□ -0.65
PSMC1-202ENST00000543772 NEUROD2Q15784 382 aa10.97□□□□□ -0.65
PSMC1-202ENST00000543772 NGEFQ8N5V2 710 aa10.97□□□□□ -0.65
PSMC1-202ENST00000543772 YTHDC1Q96MU7 727 aaKnown RBP10.97□□□□□ -0.65
PSMC1-202ENST00000543772 ATP10DQ9P241 1426 aa10.97□□□□□ -0.65
PSMC1-202ENST00000543772 PLEKHG2Q9H7P9 1386 aa10.96□□□□□ -0.65
PSMC1-202ENST00000543772 C5P01031 1676 aa10.96□□□□□ -0.65
PSMC1-202ENST00000543772 DCTN1Q14203 1278 aa10.96□□□□□ -0.65
PSMC1-202ENST00000543772 GAS2L2Q8NHY3 880 aa10.96□□□□□ -0.65
PSMC1-202ENST00000543772 LGR6Q9HBX8 967 aa10.96□□□□□ -0.65
PSMC1-202ENST00000543772 MAPK8IP3Q9UPT6 1336 aa10.96□□□□□ -0.66
PSMC1-202ENST00000543772 HTATSF1O43719 755 aaKnown RBP10.95□□□□□ -0.66
PSMC1-202ENST00000543772 PHKG2P15735 406 aa10.95□□□□□ -0.66
PSMC1-202ENST00000543772 TSR1Q2NL82 804 aaKnown RBP10.95□□□□□ -0.66
PSMC1-202ENST00000543772 IFFO2Q5TF58 517 aa10.95□□□□□ -0.66
PSMC1-202ENST00000543772 ZNF530Q6P9A1 599 aaPredicted RBP10.95□□□□□ -0.66
PSMC1-202ENST00000543772 LAPTM4BQ86VI4 370 aa10.95□□□□□ -0.66
PSMC1-202ENST00000543772 TRMT2AQ8IZ69 625 aaKnown RBP10.95□□□□□ -0.66
PSMC1-202ENST00000543772 THUMPD2Q9BTF0 503 aaKnown RBP10.95□□□□□ -0.66
PSMC1-202ENST00000543772 SPG7Q9UQ90 795 aa10.95□□□□□ -0.66
PSMC1-202ENST00000543772 GNAT3A8MTJ3 354 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 1667.3 ms