RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 TFCP2L1Q9NZI6 479 aa15.11■□□□□ 0.01
DDB1-223ENST00000543658 PXDNLA1KZ92 1463 aa15.1■□□□□ 0.01
DDB1-223ENST00000543658 PLIN1O60240 522 aa15.09■□□□□ 0.01
DDB1-223ENST00000543658 SSFA2P28290 1259 aa15.09■□□□□ 0.01
DDB1-223ENST00000543658 EIF5P55010 431 aaKnown RBP15.09■□□□□ 0.01
DDB1-223ENST00000543658 NEXNQ0ZGT2 675 aa15.09■□□□□ 0.01
DDB1-223ENST00000543658 TRAPPC3LQ5T215 181 aa15.09■□□□□ 0.01
DDB1-223ENST00000543658 FLAD1Q8NFF5 587 aa15.09■□□□□ 0.01
DDB1-223ENST00000543658 ZPR1O75312 459 aa15.08■□□□□ 0
DDB1-223ENST00000543658 RFC4P35249 363 aa15.08■□□□□ 0
DDB1-223ENST00000543658 SLC4A10Q6U841 1118 aa15.08■□□□□ 0
DDB1-223ENST00000543658 KSR2Q6VAB6 950 aa15.08■□□□□ 0
DDB1-223ENST00000543658 ANKRD13DQ6ZTN6 518 aa15.08■□□□□ 0
DDB1-223ENST00000543658 DZIP1LQ8IYY4 767 aaKnown RBP15.08■□□□□ 0
DDB1-223ENST00000543658 PLBD2Q8NHP8 589 aa15.08■□□□□ 0
DDB1-223ENST00000543658 DNAAF4Q8WXU2 420 aa15.08■□□□□ 0
DDB1-223ENST00000543658 CLUAP1Q96AJ1 413 aa15.08■□□□□ 0
DDB1-223ENST00000543658 ZBTB3Q9H5J0 574 aa15.08■□□□□ 0
DDB1-223ENST00000543658 ZNF652Q9Y2D9 606 aa15.08■□□□□ 0
DDB1-223ENST00000543658 MAP3K15Q6ZN16 1313 aa15.08■□□□□ 0
DDB1-223ENST00000543658 PI4KAP2A4QPH2 592 aa15.07■□□□□ 0
DDB1-223ENST00000543658 MSH5O43196 834 aa15.07■□□□□ 0
DDB1-223ENST00000543658 TRIM27P14373 513 aa15.07■□□□□ 0
DDB1-223ENST00000543658 TTLL7Q6ZT98 887 aa15.07■□□□□ 0
DDB1-223ENST00000543658 LRP10Q7Z4F1 713 aa15.07■□□□□ 0
DDB1-223ENST00000543658 PI4KAP1Q8N8J0 262 aa15.07■□□□□ 0
DDB1-223ENST00000543658 AKT1S1Q96B36 256 aa15.07■□□□□ 0
DDB1-223ENST00000543658 TBC1D2BQ9UPU7 963 aa15.07■□□□□ 0
DDB1-223ENST00000543658 MAP3K2Q9Y2U5 619 aa15.07■□□□□ 0
DDB1-223ENST00000543658 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.06■□□□□ 0
DDB1-223ENST00000543658 PDE3AQ14432 1141 aa15.06■□□□□ 0
DDB1-223ENST00000543658 ZNF827Q17R98 1081 aa15.06■□□□□ 0
DDB1-223ENST00000543658 HSP90AB3PQ58FF7 597 aa15.06■□□□□ 0
DDB1-223ENST00000543658 ADCY9O60503 1353 aa15.06■□□□□ 0
DDB1-223ENST00000543658 ERVV-1B6SEH8 477 aa15.05■□□□□ -0
DDB1-223ENST00000543658 F6X3S4 739 aa15.05■□□□□ -0
DDB1-223ENST00000543658 CCT4P50991 539 aaKnown RBP15.05■□□□□ -0
DDB1-223ENST00000543658 SLC15A2Q16348 729 aa15.05■□□□□ -0
DDB1-223ENST00000543658 ABCC4O15439 1325 aa15.05■□□□□ -0
DDB1-223ENST00000543658 RNF123Q5XPI4 1314 aa15.05■□□□□ -0
DDB1-223ENST00000543658 GIGYF2Q6Y7W6 1299 aaKnown RBP15.04■□□□□ -0
DDB1-223ENST00000543658 ITPRIPQ8IWB1 547 aa15.04■□□□□ -0
DDB1-223ENST00000543658 ARHGEF1Q92888 912 aaKnown RBP15.04■□□□□ -0
DDB1-223ENST00000543658 MYD88Q99836 296 aa15.04■□□□□ -0
DDB1-223ENST00000543658 METTL22Q9BUU2 404 aaPredicted RBP15.04■□□□□ -0
DDB1-223ENST00000543658 ANO8Q9HCE9 1232 aaPredicted RBP15.04■□□□□ -0
DDB1-223ENST00000543658 NARFQ9UHQ1 456 aa15.04■□□□□ -0
DDB1-223ENST00000543658 ATP10DQ9P241 1426 aa15.03■□□□□ -0
DDB1-223ENST00000543658 USP42Q9H9J4 1324 aaKnown RBP15.03■□□□□ -0
DDB1-223ENST00000543658 USPL1Q5W0Q7 1092 aa15.03■□□□□ -0
DDB1-223ENST00000543658 SRCIN1Q9C0H9 1055 aa15.03■□□□□ -0
DDB1-223ENST00000543658 CHMP4BQ9H444 224 aaKnown RBP15.03■□□□□ -0
DDB1-223ENST00000543658 CAMTA2O94983 1202 aa15.02■□□□□ -0
DDB1-223ENST00000543658 SMIM5Q71RC9 77 aa15.02■□□□□ -0
DDB1-223ENST00000543658 PIAS4Q8N2W9 510 aaPredicted RBP15.02■□□□□ -0
DDB1-223ENST00000543658 PANK1Q8TE04 598 aa15.02■□□□□ -0
DDB1-223ENST00000543658 TNNQ9UQP3 1299 aa15.02■□□□□ -0
DDB1-223ENST00000543658 COL24A1Q17RW2 1714 aa15.01□□□□□ -0.01
DDB1-223ENST00000543658 PNPLA7Q6ZV29 1317 aa15.01□□□□□ -0.01
DDB1-223ENST00000543658 RGL2O15211 777 aa15.01□□□□□ -0.01
DDB1-223ENST00000543658 MVPQ14764 893 aaKnown RBP15.01□□□□□ -0.01
DDB1-223ENST00000543658 CLEC4GQ6UXB4 293 aa15.01□□□□□ -0.01
DDB1-223ENST00000543658 TMEM57Q8N5G2 664 aa15.01□□□□□ -0.01
DDB1-223ENST00000543658 LINS1Q8NG48 757 aa15.01□□□□□ -0.01
DDB1-223ENST00000543658 SRP68Q9UHB9 627 aaKnown RBP15.01□□□□□ -0.01
DDB1-223ENST00000543658 DDX19BQ9UMR2 479 aa15.01□□□□□ -0.01
DDB1-223ENST00000543658 COG6Q9Y2V7 657 aa15.01□□□□□ -0.01
DDB1-223ENST00000543658 MYH3P11055 1940 aa15.01□□□□□ -0.01
DDB1-223ENST00000543658 ALDH1L1O75891 902 aa15□□□□□ -0.01
DDB1-223ENST00000543658 IRX6P78412 446 aaPredicted RBP15□□□□□ -0.01
DDB1-223ENST00000543658 TCIRG1Q13488 830 aa15□□□□□ -0.01
DDB1-223ENST00000543658 HLFQ16534 295 aa15□□□□□ -0.01
DDB1-223ENST00000543658 C20orf194Q5TEA3 1177 aa15□□□□□ -0.01
DDB1-223ENST00000543658 INTS3Q68E01 1043 aaKnown RBP15□□□□□ -0.01
DDB1-223ENST00000543658 AMIGO3Q86WK7 504 aa15□□□□□ -0.01
DDB1-223ENST00000543658 ATP5J2-PTCD1G3V325 749 aa14.99□□□□□ -0.01
DDB1-223ENST00000543658 RLBP1P12271 317 aa14.99□□□□□ -0.01
DDB1-223ENST00000543658 GPTP24298 496 aa14.99□□□□□ -0.01
DDB1-223ENST00000543658 BEND3Q5T5X7 828 aa14.99□□□□□ -0.01
DDB1-223ENST00000543658 COL23A1Q86Y22 540 aaPredicted RBP14.99□□□□□ -0.01
DDB1-223ENST00000543658 NIP7Q9Y221 180 aaKnown RBP eCLIP14.99□□□□□ -0.01
DDB1-223ENST00000543658 LAMB2P55268 1798 aa14.98□□□□□ -0.01
DDB1-223ENST00000543658 CASZ1Q86V15 1759 aa14.98□□□□□ -0.01
DDB1-223ENST00000543658 NEURL1BA8MQ27 555 aa14.98□□□□□ -0.01
DDB1-223ENST00000543658 NPHP1O15259 732 aa14.98□□□□□ -0.01
DDB1-223ENST00000543658 CWF19L2Q2TBE0 894 aaKnown RBP14.98□□□□□ -0.01
DDB1-223ENST00000543658 PARP10Q53GL7 1025 aa14.98□□□□□ -0.01
DDB1-223ENST00000543658 BICDL1Q6ZP65 573 aa14.98□□□□□ -0.01
DDB1-223ENST00000543658 CCDC191Q8NCU4 936 aa14.98□□□□□ -0.01
DDB1-223ENST00000543658 CRBNQ96SW2 442 aa14.98□□□□□ -0.01
DDB1-223ENST00000543658 CWC25Q9NXE8 425 aaPredicted RBP14.98□□□□□ -0.01
DDB1-223ENST00000543658 C9orf78Q9NZ63 289 aaPredicted RBP14.98□□□□□ -0.01
DDB1-223ENST00000543658 HDAC5Q9UQL6 1122 aa14.98□□□□□ -0.01
DDB1-223ENST00000543658 PPP1R42Q7Z4L9 355 aa14.97□□□□□ -0.01
DDB1-223ENST00000543658 SETDB2Q96T68 719 aa14.97□□□□□ -0.01
DDB1-223ENST00000543658 GNAI3P08754 354 aa14.96□□□□□ -0.01
DDB1-223ENST00000543658 GYS1P13807 737 aa14.96□□□□□ -0.01
DDB1-223ENST00000543658 NLGN1Q8N2Q7 840 aa14.96□□□□□ -0.01
DDB1-223ENST00000543658 ISCA1Q9BUE6 129 aa14.96□□□□□ -0.01
DDB1-223ENST00000543658 CARMIL3Q8ND23 1372 aa14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms