RNA–Protein interactions for RNA: ENST00000543585.1

SCNN1A-220, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 4

Gene SCNN1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-220ENST00000543585 TTLL7Q6ZT98 887 aa20.67■□□□□ 0.9
SCNN1A-220ENST00000543585 NPM2Q86SE8 214 aaKnown RBP20.67■□□□□ 0.9
SCNN1A-220ENST00000543585 NGEFQ8N5V2 710 aa20.67■□□□□ 0.9
SCNN1A-220ENST00000543585 CFAP44Q96MT7 982 aa20.67■□□□□ 0.9
SCNN1A-220ENST00000543585 MBIPQ9NS73 344 aa20.67■□□□□ 0.9
SCNN1A-220ENST00000543585 ANXA1P04083 346 aa20.66■□□□□ 0.9
SCNN1A-220ENST00000543585 CCDC24Q8N4L8 307 aa20.66■□□□□ 0.9
SCNN1A-220ENST00000543585 ARFGEF2Q9Y6D5 1785 aa20.66■□□□□ 0.9
SCNN1A-220ENST00000543585 ERBB4Q15303 1308 aa20.65■□□□□ 0.9
SCNN1A-220ENST00000543585 PRR5LQ6MZQ0 368 aa20.65■□□□□ 0.9
SCNN1A-220ENST00000543585 CLEC4GQ6UXB4 293 aa20.65■□□□□ 0.9
SCNN1A-220ENST00000543585 NECTIN2Q92692 538 aa20.65■□□□□ 0.9
SCNN1A-220ENST00000543585 TNRC6CQ9HCJ0 1690 aaKnown RBP20.64■□□□□ 0.9
SCNN1A-220ENST00000543585 BCS1LQ9Y276 419 aa20.64■□□□□ 0.89
SCNN1A-220ENST00000543585 SLX4Q8IY92 1834 aa20.64■□□□□ 0.89
SCNN1A-220ENST00000543585 MAP3K15Q6ZN16 1313 aa20.63■□□□□ 0.89
SCNN1A-220ENST00000543585 SETDB2Q96T68 719 aa20.63■□□□□ 0.89
SCNN1A-220ENST00000543585 IFT57Q9NWB7 429 aa20.63■□□□□ 0.89
SCNN1A-220ENST00000543585 RGL2O15211 777 aa20.62■□□□□ 0.89
SCNN1A-220ENST00000543585 PIM2Q9P1W9 311 aa20.61■□□□□ 0.89
SCNN1A-220ENST00000543585 ZNF652Q9Y2D9 606 aa20.61■□□□□ 0.89
SCNN1A-220ENST00000543585 ATP10DQ9P241 1426 aa20.61■□□□□ 0.89
SCNN1A-220ENST00000543585 ERVV-1B6SEH8 477 aa20.6■□□□□ 0.89
SCNN1A-220ENST00000543585 CCDC27Q2M243 656 aa20.6■□□□□ 0.89
SCNN1A-220ENST00000543585 WWC1Q8IX03 1113 aa20.6■□□□□ 0.89
SCNN1A-220ENST00000543585 ZBTB3Q9H5J0 574 aa20.6■□□□□ 0.89
SCNN1A-220ENST00000543585 NIP7Q9Y221 180 aaKnown RBP eCLIP20.6■□□□□ 0.89
SCNN1A-220ENST00000543585 LAMB2P55268 1798 aa20.59■□□□□ 0.89
SCNN1A-220ENST00000543585 FER1L6Q2WGJ9 1857 aa20.59■□□□□ 0.89
SCNN1A-220ENST00000543585 GNAI1P63096 354 aa20.59■□□□□ 0.89
SCNN1A-220ENST00000543585 DUSP27Q5VZP5 1158 aa20.59■□□□□ 0.89
SCNN1A-220ENST00000543585 CNBD1Q8NA66 436 aa20.59■□□□□ 0.89
SCNN1A-220ENST00000543585 ZNF784Q8NCA9 323 aaPredicted RBP20.59■□□□□ 0.89
SCNN1A-220ENST00000543585 CACNA1FO60840 1977 aa20.59■□□□□ 0.89
SCNN1A-220ENST00000543585 UBN2Q6ZU65 1347 aa20.58■□□□□ 0.89
SCNN1A-220ENST00000543585 HOXB7P09629 217 aa20.58■□□□□ 0.89
SCNN1A-220ENST00000543585 KIF6Q6ZMV9 814 aa20.58■□□□□ 0.89
SCNN1A-220ENST00000543585 C2CD5Q86YS7 1000 aa20.58■□□□□ 0.89
SCNN1A-220ENST00000543585 BRIP1Q9BX63 1249 aa20.58■□□□□ 0.89
SCNN1A-220ENST00000543585 DDX21Q9NR30 783 aaKnown RBP eCLIP20.58■□□□□ 0.89
SCNN1A-220ENST00000543585 CHPF2Q9P2E5 772 aa20.58■□□□□ 0.89
SCNN1A-220ENST00000543585 CALD1Q05682 793 aaKnown RBP20.57■□□□□ 0.88
SCNN1A-220ENST00000543585 DALRD3Q5D0E6 543 aaKnown RBP20.57■□□□□ 0.88
SCNN1A-220ENST00000543585 HDGFL1Q5TGJ6 251 aa20.57■□□□□ 0.88
SCNN1A-220ENST00000543585 NBPF5PQ86XG9 351 aaPredicted RBP20.57■□□□□ 0.88
SCNN1A-220ENST00000543585 FAM9BQ8IZU0 186 aa20.57■□□□□ 0.88
SCNN1A-220ENST00000543585 C8orf58Q8NAV2 365 aa20.57■□□□□ 0.88
SCNN1A-220ENST00000543585 ADCY9O60503 1353 aa20.57■□□□□ 0.88
SCNN1A-220ENST00000543585 FAM177BA6PVY3 158 aa20.56■□□□□ 0.88
SCNN1A-220ENST00000543585 GIGYF2Q6Y7W6 1299 aaKnown RBP20.56■□□□□ 0.88
SCNN1A-220ENST00000543585 XAGE3Q8WTP9 111 aa20.56■□□□□ 0.88
SCNN1A-220ENST00000543585 TSR2Q969E8 191 aaKnown RBP20.56■□□□□ 0.88
SCNN1A-220ENST00000543585 DICER1Q9UPY3 1922 aaKnown RBP20.55■□□□□ 0.88
SCNN1A-220ENST00000543585 ELL2O00472 640 aaPredicted RBP20.55■□□□□ 0.88
SCNN1A-220ENST00000543585 GPTP24298 496 aa20.55■□□□□ 0.88
SCNN1A-220ENST00000543585 NCBP3Q53F19 620 aaKnown RBP20.55■□□□□ 0.88
SCNN1A-220ENST00000543585 COPS6Q7L5N1 327 aa20.55■□□□□ 0.88
SCNN1A-220ENST00000543585 ZNF34Q8IZ26 560 aa20.55■□□□□ 0.88
SCNN1A-220ENST00000543585 SALL2Q9Y467 1007 aaPredicted RBP20.55■□□□□ 0.88
SCNN1A-220ENST00000543585 ABCC12Q96J65 1359 aa20.55■□□□□ 0.88
SCNN1A-220ENST00000543585 H0YIN7 160 aa20.54■□□□□ 0.88
SCNN1A-220ENST00000543585 ST5P78524 1137 aa20.54■□□□□ 0.88
SCNN1A-220ENST00000543585 AIMP1Q12904 312 aaKnown RBP20.54■□□□□ 0.88
SCNN1A-220ENST00000543585 TSPYL6Q8N831 410 aa20.54■□□□□ 0.88
SCNN1A-220ENST00000543585 PDE6BP35913 854 aa20.53■□□□□ 0.88
SCNN1A-220ENST00000543585 ARHGAP27Q6ZUM4 889 aa20.53■□□□□ 0.88
SCNN1A-220ENST00000543585 TAF1P21675 1872 aa20.53■□□□□ 0.88
SCNN1A-220ENST00000543585 NPHP1O15259 732 aa20.52■□□□□ 0.88
SCNN1A-220ENST00000543585 SUSD4Q5VX71 490 aa20.52■□□□□ 0.88
SCNN1A-220ENST00000543585 NUTM1Q86Y26 1132 aa20.52■□□□□ 0.88
SCNN1A-220ENST00000543585 TTLL6Q8N841 843 aa20.52■□□□□ 0.88
SCNN1A-220ENST00000543585 DDX60Q8IY21 1712 aaKnown RBP20.52■□□□□ 0.88
SCNN1A-220ENST00000543585 IL16Q14005 1332 aa20.52■□□□□ 0.87
SCNN1A-220ENST00000543585 IBTKQ9P2D0 1353 aaPredicted RBP20.51■□□□□ 0.87
SCNN1A-220ENST00000543585 SRGNP10124 158 aa20.51■□□□□ 0.87
SCNN1A-220ENST00000543585 TPTE2Q6XPS3 522 aa20.51■□□□□ 0.87
SCNN1A-220ENST00000543585 ZNF622Q969S3 477 aaKnown RBP eCLIP20.51■□□□□ 0.87
SCNN1A-220ENST00000543585 DBF4Q9UBU7 674 aaPredicted RBP20.51■□□□□ 0.87
SCNN1A-220ENST00000543585 KLRG2A4D1S0 409 aaPredicted RBP20.5■□□□□ 0.87
SCNN1A-220ENST00000543585 NTSR2O95665 410 aa20.5■□□□□ 0.87
SCNN1A-220ENST00000543585 ERFEQ4G0M1 354 aa20.5■□□□□ 0.87
SCNN1A-220ENST00000543585 TIAM2Q8IVF5 1701 aa20.5■□□□□ 0.87
SCNN1A-220ENST00000543585 SPINK5Q9NQ38 1064 aaPredicted RBP20.49■□□□□ 0.87
SCNN1A-220ENST00000543585 PDZRN3Q9UPQ7 1066 aa20.49■□□□□ 0.87
SCNN1A-220ENST00000543585 RIC1Q4ADV7 1423 aa20.48■□□□□ 0.87
SCNN1A-220ENST00000543585 PRELPP51888 382 aa20.48■□□□□ 0.87
SCNN1A-220ENST00000543585 PHAXQ9H814 394 aaKnown RBP20.48■□□□□ 0.87
SCNN1A-220ENST00000543585 RASSF7Q02833 373 aa20.47■□□□□ 0.87
SCNN1A-220ENST00000543585 STYK1Q6J9G0 422 aa20.47■□□□□ 0.87
SCNN1A-220ENST00000543585 MASTLQ96GX5 879 aa20.47■□□□□ 0.87
SCNN1A-220ENST00000543585 NYXQ9GZU5 481 aa20.47■□□□□ 0.87
SCNN1A-220ENST00000543585 FANCIQ9NVI1 1328 aa20.47■□□□□ 0.87
SCNN1A-220ENST00000543585 TCIRG1Q13488 830 aa20.46■□□□□ 0.87
SCNN1A-220ENST00000543585 C3orf67Q6ZVT6 689 aa20.46■□□□□ 0.87
SCNN1A-220ENST00000543585 WDR63Q8IWG1 891 aa20.46■□□□□ 0.87
SCNN1A-220ENST00000543585 PLBD2Q8NHP8 589 aa20.46■□□□□ 0.87
SCNN1A-220ENST00000543585 HYPKQ9NX55 129 aa20.46■□□□□ 0.87
SCNN1A-220ENST00000543585 NFKBIEO00221 500 aa20.45■□□□□ 0.86
SCNN1A-220ENST00000543585 C21orf2O43822 256 aa20.45■□□□□ 0.86
SCNN1A-220ENST00000543585 PARP10Q53GL7 1025 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms