RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 TTLL7Q6ZT98 887 aa8.08□□□□□ -1.12
LTBR-212ENST00000543542 RIC3Q7Z5B4 369 aa8.08□□□□□ -1.12
LTBR-212ENST00000543542 PHAXQ9H814 394 aaKnown RBP8.08□□□□□ -1.12
LTBR-212ENST00000543542 PARP3Q9Y6F1 533 aa8.08□□□□□ -1.12
LTBR-212ENST00000543542 SCN7AQ01118 1682 aa8.08□□□□□ -1.12
LTBR-212ENST00000543542 BCORQ6W2J9 1755 aa8.07□□□□□ -1.12
LTBR-212ENST00000543542 MAP3K15Q6ZN16 1313 aa8.07□□□□□ -1.12
LTBR-212ENST00000543542 FAM177BA6PVY3 158 aa8.07□□□□□ -1.12
LTBR-212ENST00000543542 CAMTA2O94983 1202 aa8.07□□□□□ -1.12
LTBR-212ENST00000543542 MMP10P09238 476 aa8.07□□□□□ -1.12
LTBR-212ENST00000543542 CT47B1P0C2W7 299 aaPredicted RBP8.07□□□□□ -1.12
LTBR-212ENST00000543542 FKBP5Q13451 457 aaPredicted RBP8.07□□□□□ -1.12
LTBR-212ENST00000543542 FKBP8Q14318 412 aa8.07□□□□□ -1.12
LTBR-212ENST00000543542 PDIA6Q15084 440 aa8.07□□□□□ -1.12
LTBR-212ENST00000543542 ANKRD13DQ6ZTN6 518 aa8.07□□□□□ -1.12
LTBR-212ENST00000543542 TRMT2AQ8IZ69 625 aaKnown RBP8.07□□□□□ -1.12
LTBR-212ENST00000543542 SMC4Q9NTJ3 1288 aa8.07□□□□□ -1.12
LTBR-212ENST00000543542 CACNA1FO60840 1977 aa8.06□□□□□ -1.12
LTBR-212ENST00000543542 NUP98P52948 1817 aa8.06□□□□□ -1.12
LTBR-212ENST00000543542 ERVV-1B6SEH8 477 aa8.06□□□□□ -1.12
LTBR-212ENST00000543542 GTF2E1P29083 439 aaPredicted RBP8.06□□□□□ -1.12
LTBR-212ENST00000543542 HSP90AB3PQ58FF7 597 aa8.06□□□□□ -1.12
LTBR-212ENST00000543542 ZNF428Q96B54 188 aa8.06□□□□□ -1.12
LTBR-212ENST00000543542 SETDB2Q96T68 719 aa8.06□□□□□ -1.12
LTBR-212ENST00000543542 BCL2L13Q9BXK5 485 aa8.06□□□□□ -1.12
LTBR-212ENST00000543542 NIP7Q9Y221 180 aaKnown RBP eCLIP8.06□□□□□ -1.12
LTBR-212ENST00000543542 ARFGEF2Q9Y6D5 1785 aa8.05□□□□□ -1.12
LTBR-212ENST00000543542 GPTP24298 496 aa8.05□□□□□ -1.12
LTBR-212ENST00000543542 NEXNQ0ZGT2 675 aa8.05□□□□□ -1.12
LTBR-212ENST00000543542 FLIIQ13045 1269 aa8.05□□□□□ -1.12
LTBR-212ENST00000543542 HLFQ16534 295 aa8.05□□□□□ -1.12
LTBR-212ENST00000543542 ALDH1L2Q3SY69 923 aa8.05□□□□□ -1.12
LTBR-212ENST00000543542 TBC1D9BQ66K14 1250 aa8.05□□□□□ -1.12
LTBR-212ENST00000543542 CLEC4GQ6UXB4 293 aa8.05□□□□□ -1.12
LTBR-212ENST00000543542 GIGYF2Q6Y7W6 1299 aaKnown RBP8.05□□□□□ -1.12
LTBR-212ENST00000543542 G2E3Q7L622 706 aa8.05□□□□□ -1.12
LTBR-212ENST00000543542 PLBD2Q8NHP8 589 aa8.05□□□□□ -1.12
LTBR-212ENST00000543542 SSH1Q8WYL5 1049 aa8.05□□□□□ -1.12
LTBR-212ENST00000543542 MYD88Q99836 296 aa8.05□□□□□ -1.12
LTBR-212ENST00000543542 ANKRD36CQ5JPF3 1778 aa8.05□□□□□ -1.12
LTBR-212ENST00000543542 PI4KAP2A4QPH2 592 aa8.04□□□□□ -1.12
LTBR-212ENST00000543542 SERPINB2P05120 415 aa8.04□□□□□ -1.12
LTBR-212ENST00000543542 NFIXQ14938 502 aa8.04□□□□□ -1.12
LTBR-212ENST00000543542 SLC4A10Q6U841 1118 aa8.04□□□□□ -1.12
LTBR-212ENST00000543542 KSR2Q6VAB6 950 aa8.04□□□□□ -1.12
LTBR-212ENST00000543542 LRP10Q7Z4F1 713 aa8.04□□□□□ -1.12
LTBR-212ENST00000543542 NBPF5PQ86XG9 351 aaPredicted RBP8.04□□□□□ -1.12
LTBR-212ENST00000543542 MRPL50Q8N5N7 158 aaKnown RBP8.04□□□□□ -1.12
LTBR-212ENST00000543542 PI4KAP1Q8N8J0 262 aa8.04□□□□□ -1.12
LTBR-212ENST00000543542 FRAT1Q92837 279 aaPredicted RBP8.04□□□□□ -1.12
LTBR-212ENST00000543542 BCL2L12Q9HB09 334 aa8.04□□□□□ -1.12
LTBR-212ENST00000543542 MAP3K2Q9Y2U5 619 aa8.04□□□□□ -1.12
LTBR-212ENST00000543542 CARMIL3Q8ND23 1372 aa8.04□□□□□ -1.12
LTBR-212ENST00000543542 AFDNP55196 1824 aaKnown RBP8.03□□□□□ -1.12
LTBR-212ENST00000543542 ATP5J2-PTCD1G3V325 749 aa8.03□□□□□ -1.12
LTBR-212ENST00000543542 POLRMTO00411 1230 aaKnown RBP8.03□□□□□ -1.12
LTBR-212ENST00000543542 TM4SF1P30408 202 aa8.03□□□□□ -1.12
LTBR-212ENST00000543542 RARSP54136 660 aaKnown RBP8.03□□□□□ -1.12
LTBR-212ENST00000543542 ST5P78524 1137 aa8.03□□□□□ -1.12
LTBR-212ENST00000543542 TCIRG1Q13488 830 aa8.03□□□□□ -1.12
LTBR-212ENST00000543542 TPTE2Q6XPS3 522 aa8.03□□□□□ -1.12
LTBR-212ENST00000543542 PPP1R42Q7Z4L9 355 aa8.03□□□□□ -1.12
LTBR-212ENST00000543542 CNBD1Q8NA66 436 aa8.03□□□□□ -1.12
LTBR-212ENST00000543542 NYXQ9GZU5 481 aa8.03□□□□□ -1.12
LTBR-212ENST00000543542 COL24A1Q17RW2 1714 aa8.03□□□□□ -1.12
LTBR-212ENST00000543542 LRP5O75197 1615 aa8.03□□□□□ -1.12
LTBR-212ENST00000543542 PTPRCP08575 1304 aa8.03□□□□□ -1.12
LTBR-212ENST00000543542 RGL2O15211 777 aa8.02□□□□□ -1.13
LTBR-212ENST00000543542 IPO8O15397 1037 aaKnown RBP8.02□□□□□ -1.13
LTBR-212ENST00000543542 PTGER2P43116 358 aa8.02□□□□□ -1.13
LTBR-212ENST00000543542 DDR1Q08345 913 aa8.02□□□□□ -1.13
LTBR-212ENST00000543542 PARP10Q53GL7 1025 aa8.02□□□□□ -1.13
LTBR-212ENST00000543542 CCDC24Q8N4L8 307 aa8.02□□□□□ -1.13
LTBR-212ENST00000543542 DNAAF4Q8WXU2 420 aa8.02□□□□□ -1.13
LTBR-212ENST00000543542 METTL22Q9BUU2 404 aaPredicted RBP8.02□□□□□ -1.13
LTBR-212ENST00000543542 TRMT112Q9UI30 125 aaKnown RBP8.02□□□□□ -1.13
LTBR-212ENST00000543542 NOB1Q9ULX3 412 aaKnown RBP8.02□□□□□ -1.13
LTBR-212ENST00000543542 ATP10DQ9P241 1426 aa8.02□□□□□ -1.13
LTBR-212ENST00000543542 KIF16BQ96L93 1317 aa8.02□□□□□ -1.13
LTBR-212ENST00000543542 ADCY9O60503 1353 aa8.01□□□□□ -1.13
LTBR-212ENST00000543542 F6X3S4 739 aa8.01□□□□□ -1.13
LTBR-212ENST00000543542 BCAR3O75815 825 aa8.01□□□□□ -1.13
LTBR-212ENST00000543542 RTL5Q5HYW3 569 aaPredicted RBP8.01□□□□□ -1.13
LTBR-212ENST00000543542 SUSD4Q5VX71 490 aa8.01□□□□□ -1.13
LTBR-212ENST00000543542 ZNF34Q8IZ26 560 aa8.01□□□□□ -1.13
LTBR-212ENST00000543542 SGIP1Q9BQI5 828 aa8.01□□□□□ -1.13
LTBR-212ENST00000543542 UTP14AQ9BVJ6 771 aaKnown RBP8.01□□□□□ -1.13
LTBR-212ENST00000543542 API5Q9BZZ5 524 aaKnown RBP8.01□□□□□ -1.13
LTBR-212ENST00000543542 FHDC1Q9C0D6 1143 aaPredicted RBP8.01□□□□□ -1.13
LTBR-212ENST00000543542 CWC25Q9NXE8 425 aaPredicted RBP8.01□□□□□ -1.13
LTBR-212ENST00000543542 RCAN3Q9UKA8 241 aa8.01□□□□□ -1.13
LTBR-212ENST00000543542 ERFEQ4G0M1 354 aa8□□□□□ -1.13
LTBR-212ENST00000543542 PRR5LQ6MZQ0 368 aa8□□□□□ -1.13
LTBR-212ENST00000543542 NLRP10Q86W26 655 aa8□□□□□ -1.13
LTBR-212ENST00000543542 NUTM1Q86Y26 1132 aa8□□□□□ -1.13
LTBR-212ENST00000543542 PELP1Q8IZL8 1130 aaKnown RBP8□□□□□ -1.13
LTBR-212ENST00000543542 GOLGA6L2Q8N9W4 650 aaPredicted RBP8□□□□□ -1.13
LTBR-212ENST00000543542 SRCIN1Q9C0H9 1055 aa8□□□□□ -1.13
LTBR-212ENST00000543542 UBN2Q6ZU65 1347 aa8□□□□□ -1.13
LTBR-212ENST00000543542 DCAF8L1A6NGE4 600 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms