RNA–Protein interactions for RNA: ENST00000543184.5

PRAME-214, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,758 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-214ENST00000543184 KIF24Q5T7B8 1368 aa17.16■□□□□ 0.34
PRAME-214ENST00000543184 CUL4AQ13619 759 aa17.16■□□□□ 0.34
PRAME-214ENST00000543184 NHSL1Q5SYE7 1610 aa17.16■□□□□ 0.34
PRAME-214ENST00000543184 FIBPO43427 364 aa17.15■□□□□ 0.34
PRAME-214ENST00000543184 MEX3CQ5U5Q3 659 aaKnown RBP17.15■□□□□ 0.34
PRAME-214ENST00000543184 CHMP3Q9Y3E7 222 aa17.15■□□□□ 0.34
PRAME-214ENST00000543184 SRCAPQ6ZRS2 3230 aa17.15■□□□□ 0.34
PRAME-214ENST00000543184 OSBPL3Q9H4L5 887 aa17.15■□□□□ 0.34
PRAME-214ENST00000543184 MCCP23508 829 aa17.14■□□□□ 0.33
PRAME-214ENST00000543184 SASS6Q6UVJ0 657 aa17.14■□□□□ 0.33
PRAME-214ENST00000543184 ADCY5O95622 1261 aa17.14■□□□□ 0.33
PRAME-214ENST00000543184 KIAA2012Q0VF49 1180 aa17.14■□□□□ 0.33
PRAME-214ENST00000543184 RTF1Q92541 710 aaKnown RBP17.14■□□□□ 0.33
PRAME-214ENST00000543184 SALL3Q9BXA9 1300 aa17.14■□□□□ 0.33
PRAME-214ENST00000543184 COL16A1Q07092 1604 aaPredicted RBP17.13■□□□□ 0.33
PRAME-214ENST00000543184 GIMAP6Q6P9H5 292 aa17.13■□□□□ 0.33
PRAME-214ENST00000543184 BCL11BQ9C0K0 894 aaPredicted RBP17.13■□□□□ 0.33
PRAME-214ENST00000543184 SPG7Q9UQ90 795 aa17.13■□□□□ 0.33
PRAME-214ENST00000543184 LTN1O94822 1766 aa17.13■□□□□ 0.33
PRAME-214ENST00000543184 FLIIQ13045 1269 aa17.13■□□□□ 0.33
PRAME-214ENST00000543184 RASEFQ8IZ41 740 aa17.13■□□□□ 0.33
PRAME-214ENST00000543184 A0A0G2JS52 829 aa17.12■□□□□ 0.33
PRAME-214ENST00000543184 LARGE1O95461 756 aa17.12■□□□□ 0.33
PRAME-214ENST00000543184 CSPP1Q1MSJ5 1256 aa17.12■□□□□ 0.33
PRAME-214ENST00000543184 SLIT3O75094 1523 aa17.12■□□□□ 0.33
PRAME-214ENST00000543184 CCT4P50991 539 aaKnown RBP17.11■□□□□ 0.33
PRAME-214ENST00000543184 SPC24Q8NBT2 197 aa17.11■□□□□ 0.33
PRAME-214ENST00000543184 CRB1P82279 1406 aa17.11■□□□□ 0.33
PRAME-214ENST00000543184 AHDC1Q5TGY3 1603 aaPredicted RBP17.11■□□□□ 0.33
PRAME-214ENST00000543184 CAMTA1Q9Y6Y1 1673 aa17.11■□□□□ 0.33
PRAME-214ENST00000543184 AP5Z1O43299 807 aa17.11■□□□□ 0.33
PRAME-214ENST00000543184 TERF1P54274 439 aa17.11■□□□□ 0.33
PRAME-214ENST00000543184 STK31Q9BXU1 1019 aa17.11■□□□□ 0.33
PRAME-214ENST00000543184 PHAXQ9H814 394 aaKnown RBP17.11■□□□□ 0.33
PRAME-214ENST00000543184 CWC27Q6UX04 472 aaKnown RBP17.11■□□□□ 0.33
PRAME-214ENST00000543184 RPAP1Q9BWH6 1393 aaPredicted RBP17.1■□□□□ 0.33
PRAME-214ENST00000543184 PRDM4Q9UKN5 801 aa17.1■□□□□ 0.33
PRAME-214ENST00000543184 ZHX1Q9UKY1 873 aaPredicted RBP17.1■□□□□ 0.33
PRAME-214ENST00000543184 RGPD5Q99666 1765 aa17.1■□□□□ 0.33
PRAME-214ENST00000543184 JCADQ9P266 1359 aa17.1■□□□□ 0.33
PRAME-214ENST00000543184 DYNC1I1O14576 645 aa17.1■□□□□ 0.33
PRAME-214ENST00000543184 SURF6O75683 361 aaKnown RBP17.1■□□□□ 0.33
PRAME-214ENST00000543184 AK2P54819 239 aa17.1■□□□□ 0.33
PRAME-214ENST00000543184 ATP8B2P98198 1209 aa17.1■□□□□ 0.33
PRAME-214ENST00000543184 COL9A3Q14050 684 aaPredicted RBP17.09■□□□□ 0.33
PRAME-214ENST00000543184 NOLC1Q14978 699 aaKnown RBP eCLIP17.09■□□□□ 0.33
PRAME-214ENST00000543184 IGSF1Q8N6C5 1336 aa17.09■□□□□ 0.33
PRAME-214ENST00000543184 PHRF1Q9P1Y6 1649 aaKnown RBP17.09■□□□□ 0.33
PRAME-214ENST00000543184 SYAP1Q96A49 352 aaPredicted RBP17.09■□□□□ 0.33
PRAME-214ENST00000543184 ANXA1P04083 346 aa17.08■□□□□ 0.33
PRAME-214ENST00000543184 MCM2P49736 904 aa17.08■□□□□ 0.33
PRAME-214ENST00000543184 FAM173BQ6P4H8 233 aa17.08■□□□□ 0.33
PRAME-214ENST00000543184 ZNF710Q8N1W2 664 aa17.08■□□□□ 0.33
PRAME-214ENST00000543184 SYT1P21579 422 aa17.08■□□□□ 0.32
PRAME-214ENST00000543184 RUFY3Q7L099 469 aa17.08■□□□□ 0.32
PRAME-214ENST00000543184 USP44Q9H0E7 712 aa17.08■□□□□ 0.32
PRAME-214ENST00000543184 SNX14Q9Y5W7 946 aa17.08■□□□□ 0.32
PRAME-214ENST00000543184 WDR33Q9C0J8 1336 aaKnown RBP17.07■□□□□ 0.32
PRAME-214ENST00000543184 EIF2S2P20042 333 aaKnown RBP17.07■□□□□ 0.32
PRAME-214ENST00000543184 MCM5P33992 734 aa17.07■□□□□ 0.32
PRAME-214ENST00000543184 CBX1P83916 185 aa17.07■□□□□ 0.32
PRAME-214ENST00000543184 DNM1Q05193 864 aaKnown RBP17.07■□□□□ 0.32
PRAME-214ENST00000543184 CCDC83Q8IWF9 413 aa17.07■□□□□ 0.32
PRAME-214ENST00000543184 INTS4Q96HW7 963 aaKnown RBP17.07■□□□□ 0.32
PRAME-214ENST00000543184 LRP6O75581 1613 aa17.07■□□□□ 0.32
PRAME-214ENST00000543184 FAM182BQ5T319 152 aa17.06■□□□□ 0.32
PRAME-214ENST00000543184 PPP1R42Q7Z4L9 355 aa17.06■□□□□ 0.32
PRAME-214ENST00000543184 RGPD2P0DJD1 1756 aa17.06■□□□□ 0.32
PRAME-214ENST00000543184 HSPA4P34932 840 aa17.06■□□□□ 0.32
PRAME-214ENST00000543184 NECAB1Q8N987 351 aa17.06■□□□□ 0.32
PRAME-214ENST00000543184 RAPGEF4Q8WZA2 1011 aa17.06■□□□□ 0.32
PRAME-214ENST00000543184 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.05■□□□□ 0.32
PRAME-214ENST00000543184 STX6O43752 255 aa17.05■□□□□ 0.32
PRAME-214ENST00000543184 UBTFL1P0CB47 393 aaPredicted RBP17.05■□□□□ 0.32
PRAME-214ENST00000543184 ZSCAN22P10073 491 aaPredicted RBP17.05■□□□□ 0.32
PRAME-214ENST00000543184 CAMK4Q16566 473 aa17.05■□□□□ 0.32
PRAME-214ENST00000543184 ADCK5Q3MIX3 580 aa17.05■□□□□ 0.32
PRAME-214ENST00000543184 MPRIPQ6WCQ1 1025 aa17.05■□□□□ 0.32
PRAME-214ENST00000543184 FERMT3Q86UX7 667 aa17.05■□□□□ 0.32
PRAME-214ENST00000543184 PYCARDQ9ULZ3 195 aa17.05■□□□□ 0.32
PRAME-214ENST00000543184 CPDO75976 1380 aa17.05■□□□□ 0.32
PRAME-214ENST00000543184 WDR17Q8IZU2 1322 aa17.05■□□□□ 0.32
PRAME-214ENST00000543184 CASTP20810 708 aaKnown RBP17.05■□□□□ 0.32
PRAME-214ENST00000543184 CCDC183Q5T5S1 534 aa17.05■□□□□ 0.32
PRAME-214ENST00000543184 TCEANC2Q96MN5 208 aa17.05■□□□□ 0.32
PRAME-214ENST00000543184 VPS37CA5D8V6 355 aaPredicted RBP17.04■□□□□ 0.32
PRAME-214ENST00000543184 GNAI3P08754 354 aa17.04■□□□□ 0.32
PRAME-214ENST00000543184 NBPF7P0C2Y1 421 aaPredicted RBP17.04■□□□□ 0.32
PRAME-214ENST00000543184 MYRIPQ8NFW9 859 aa17.04■□□□□ 0.32
PRAME-214ENST00000543184 SOS1Q07889 1333 aaPredicted RBP17.04■□□□□ 0.32
PRAME-214ENST00000543184 COL5A2P05997 1499 aaPredicted RBP17.04■□□□□ 0.32
PRAME-214ENST00000543184 SPDYE4A6NLX3 237 aa17.04■□□□□ 0.32
PRAME-214ENST00000543184 ANAPC15P60006 121 aa17.04■□□□□ 0.32
PRAME-214ENST00000543184 FAM98CQ17RN3 349 aaKnown RBP17.04■□□□□ 0.32
PRAME-214ENST00000543184 PIBF1Q8WXW3 757 aa17.04■□□□□ 0.32
PRAME-214ENST00000543184 USP21Q9UK80 565 aa17.04■□□□□ 0.32
PRAME-214ENST00000543184 SRGAP3O43295 1099 aa17.03■□□□□ 0.32
PRAME-214ENST00000543184 SMC3Q9UQE7 1217 aa17.03■□□□□ 0.32
PRAME-214ENST00000543184 PTH1RQ03431 593 aa17.03■□□□□ 0.32
PRAME-214ENST00000543184 ZNF530Q6P9A1 599 aaPredicted RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms