RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 AMIGO3Q86WK7 504 aa29.42■■■□□ 2.3
HOMER3-205ENST00000542541 API5Q9BZZ5 524 aaKnown RBP29.42■■■□□ 2.3
HOMER3-205ENST00000542541 ERVV-1B6SEH8 477 aa29.41■■■□□ 2.3
HOMER3-205ENST00000542541 ZPR1O75312 459 aa29.41■■■□□ 2.3
HOMER3-205ENST00000542541 RIC3Q7Z5B4 369 aa29.41■■■□□ 2.3
HOMER3-205ENST00000542541 NARFQ9UHQ1 456 aa29.41■■■□□ 2.3
HOMER3-205ENST00000542541 MAP3K15Q6ZN16 1313 aa29.4■■■□□ 2.3
HOMER3-205ENST00000542541 SMIM5Q71RC9 77 aa29.4■■■□□ 2.3
HOMER3-205ENST00000542541 PI4KAP2A4QPH2 592 aa29.39■■■□□ 2.3
HOMER3-205ENST00000542541 PI4KAP1Q8N8J0 262 aa29.39■■■□□ 2.3
HOMER3-205ENST00000542541 RGL2O15211 777 aa29.38■■■□□ 2.29
HOMER3-205ENST00000542541 ATF7IPQ6VMQ6 1270 aa29.38■■■□□ 2.29
HOMER3-205ENST00000542541 ZBTB3Q9H5J0 574 aa29.38■■■□□ 2.29
HOMER3-205ENST00000542541 QSER1Q2KHR3 1735 aa29.38■■■□□ 2.29
HOMER3-205ENST00000542541 PNPLA7Q6ZV29 1317 aa29.38■■■□□ 2.29
HOMER3-205ENST00000542541 UBR3Q6ZT12 1888 aa29.38■■■□□ 2.29
HOMER3-205ENST00000542541 MSH5O43196 834 aa29.37■■■□□ 2.29
HOMER3-205ENST00000542541 MS4A1P11836 297 aa29.37■■■□□ 2.29
HOMER3-205ENST00000542541 COL23A1Q86Y22 540 aaPredicted RBP29.37■■■□□ 2.29
HOMER3-205ENST00000542541 ZNF652Q9Y2D9 606 aa29.37■■■□□ 2.29
HOMER3-205ENST00000542541 CAMTA2O94983 1202 aa29.36■■■□□ 2.29
HOMER3-205ENST00000542541 MAP3K2Q9Y2U5 619 aa29.36■■■□□ 2.29
HOMER3-205ENST00000542541 USP42Q9H9J4 1324 aaKnown RBP29.35■■■□□ 2.29
HOMER3-205ENST00000542541 CLEC4GQ6UXB4 293 aa29.35■■■□□ 2.29
HOMER3-205ENST00000542541 DNAAF4Q8WXU2 420 aa29.35■■■□□ 2.29
HOMER3-205ENST00000542541 SUPT16HQ9Y5B9 1047 aaKnown RBP29.35■■■□□ 2.29
HOMER3-205ENST00000542541 TRIM27P14373 513 aa29.34■■■□□ 2.29
HOMER3-205ENST00000542541 GIGYF2Q6Y7W6 1299 aaKnown RBP29.34■■■□□ 2.29
HOMER3-205ENST00000542541 RRP1P56182 461 aaKnown RBP29.34■■■□□ 2.29
HOMER3-205ENST00000542541 HSP90AB3PQ58FF7 597 aa29.34■■■□□ 2.29
HOMER3-205ENST00000542541 USPL1Q5W0Q7 1092 aa29.34■■■□□ 2.29
HOMER3-205ENST00000542541 ADCY9O60503 1353 aa29.33■■■□□ 2.29
HOMER3-205ENST00000542541 NEXNQ0ZGT2 675 aa29.33■■■□□ 2.29
HOMER3-205ENST00000542541 F6X3S4 739 aa29.32■■■□□ 2.28
HOMER3-205ENST00000542541 PLIN1O60240 522 aa29.32■■■□□ 2.28
HOMER3-205ENST00000542541 METTL22Q9BUU2 404 aaPredicted RBP29.32■■■□□ 2.28
HOMER3-205ENST00000542541 SRP68Q9UHB9 627 aaKnown RBP29.32■■■□□ 2.28
HOMER3-205ENST00000542541 FTSJ3Q8IY81 847 aaKnown RBP29.31■■■□□ 2.28
HOMER3-205ENST00000542541 HLFQ16534 295 aa29.31■■■□□ 2.28
HOMER3-205ENST00000542541 SLC4A10Q6U841 1118 aa29.31■■■□□ 2.28
HOMER3-205ENST00000542541 DZIP1LQ8IYY4 767 aaKnown RBP29.31■■■□□ 2.28
HOMER3-205ENST00000542541 RNF123Q5XPI4 1314 aa29.3■■■□□ 2.28
HOMER3-205ENST00000542541 TCIRG1Q13488 830 aa29.3■■■□□ 2.28
HOMER3-205ENST00000542541 CASZ1Q86V15 1759 aa29.3■■■□□ 2.28
HOMER3-205ENST00000542541 PDE3AQ14432 1141 aa29.29■■■□□ 2.28
HOMER3-205ENST00000542541 CLUAP1Q96AJ1 413 aa29.29■■■□□ 2.28
HOMER3-205ENST00000542541 R3HDM1Q15032 1099 aaKnown RBP29.28■■■□□ 2.28
HOMER3-205ENST00000542541 SLC16A10Q8TF71 515 aa29.28■■■□□ 2.28
HOMER3-205ENST00000542541 GYS1P13807 737 aa29.27■■■□□ 2.28
HOMER3-205ENST00000542541 NLGN1Q8N2Q7 840 aa29.27■■■□□ 2.28
HOMER3-205ENST00000542541 MYD88Q99836 296 aa29.27■■■□□ 2.28
HOMER3-205ENST00000542541 BCL2L12Q9HB09 334 aa29.27■■■□□ 2.28
HOMER3-205ENST00000542541 CCT4P50991 539 aaKnown RBP29.27■■■□□ 2.28
HOMER3-205ENST00000542541 LINS1Q8NG48 757 aa29.27■■■□□ 2.28
HOMER3-205ENST00000542541 ABCC4O15439 1325 aa29.26■■■□□ 2.28
HOMER3-205ENST00000542541 C4AP0C0L4 1744 aa29.25■■■□□ 2.27
HOMER3-205ENST00000542541 SRCIN1Q9C0H9 1055 aa29.25■■■□□ 2.27
HOMER3-205ENST00000542541 TRIM28Q13263 835 aaKnown RBP29.24■■■□□ 2.27
HOMER3-205ENST00000542541 BEND3Q5T5X7 828 aa29.24■■■□□ 2.27
HOMER3-205ENST00000542541 FKBP8Q14318 412 aa29.23■■■□□ 2.27
HOMER3-205ENST00000542541 INTS3Q68E01 1043 aaKnown RBP29.23■■■□□ 2.27
HOMER3-205ENST00000542541 ZNF34Q8IZ26 560 aa29.23■■■□□ 2.27
HOMER3-205ENST00000542541 ISCA1Q9BUE6 129 aa29.23■■■□□ 2.27
HOMER3-205ENST00000542541 TNNQ9UQP3 1299 aa29.23■■■□□ 2.27
HOMER3-205ENST00000542541 NIP7Q9Y221 180 aaKnown RBP eCLIP29.23■■■□□ 2.27
HOMER3-205ENST00000542541 ATP10DQ9P241 1426 aa29.23■■■□□ 2.27
HOMER3-205ENST00000542541 PXDNLA1KZ92 1463 aa29.23■■■□□ 2.27
HOMER3-205ENST00000542541 ALDH1L1O75891 902 aa29.23■■■□□ 2.27
HOMER3-205ENST00000542541 ATP5J2-PTCD1G3V325 749 aa29.22■■■□□ 2.27
HOMER3-205ENST00000542541 PARP10Q53GL7 1025 aa29.22■■■□□ 2.27
HOMER3-205ENST00000542541 CCDC191Q8NCU4 936 aa29.22■■■□□ 2.27
HOMER3-205ENST00000542541 SETDB2Q96T68 719 aa29.22■■■□□ 2.27
HOMER3-205ENST00000542541 SCN7AQ01118 1682 aa29.22■■■□□ 2.27
HOMER3-205ENST00000542541 PSDA5PKW4 1024 aaPredicted RBP29.21■■■□□ 2.27
HOMER3-205ENST00000542541 TBC1D9BQ66K14 1250 aa29.21■■■□□ 2.27
HOMER3-205ENST00000542541 PANK1Q8TE04 598 aa29.21■■■□□ 2.27
HOMER3-205ENST00000542541 BCORQ6W2J9 1755 aa29.21■■■□□ 2.27
HOMER3-205ENST00000542541 ARFGEF2Q9Y6D5 1785 aa29.21■■■□□ 2.27
HOMER3-205ENST00000542541 IGKV5-2P06315 115 aa29.2■■■□□ 2.27
HOMER3-205ENST00000542541 GPTP24298 496 aa29.2■■■□□ 2.27
HOMER3-205ENST00000542541 TMEM57Q8N5G2 664 aa29.2■■■□□ 2.27
HOMER3-205ENST00000542541 NEURL1BA8MQ27 555 aa29.2■■■□□ 2.26
HOMER3-205ENST00000542541 RLBP1P12271 317 aa29.2■■■□□ 2.26
HOMER3-205ENST00000542541 BICDL1Q6ZP65 573 aa29.2■■■□□ 2.26
HOMER3-205ENST00000542541 PDGFDQ9GZP0 370 aaPredicted RBP29.2■■■□□ 2.26
HOMER3-205ENST00000542541 CWF19L2Q2TBE0 894 aaKnown RBP29.19■■■□□ 2.26
HOMER3-205ENST00000542541 CWC25Q9NXE8 425 aaPredicted RBP29.19■■■□□ 2.26
HOMER3-205ENST00000542541 NFIXQ14938 502 aa29.18■■■□□ 2.26
HOMER3-205ENST00000542541 NLRP10Q86W26 655 aa29.18■■■□□ 2.26
HOMER3-205ENST00000542541 NUP98P52948 1817 aa29.17■■■□□ 2.26
HOMER3-205ENST00000542541 TM4SF1P30408 202 aa29.17■■■□□ 2.26
HOMER3-205ENST00000542541 C20orf194Q5TEA3 1177 aa29.17■■■□□ 2.26
HOMER3-205ENST00000542541 PPP1R42Q7Z4L9 355 aa29.17■■■□□ 2.26
HOMER3-205ENST00000542541 ITPRIPQ8IWB1 547 aa29.17■■■□□ 2.26
HOMER3-205ENST00000542541 GCKRQ14397 625 aa29.16■■■□□ 2.26
HOMER3-205ENST00000542541 IBTKQ9P2D0 1353 aaPredicted RBP29.16■■■□□ 2.26
HOMER3-205ENST00000542541 UBN2Q6ZU65 1347 aa29.15■■■□□ 2.26
HOMER3-205ENST00000542541 MVPQ14764 893 aaKnown RBP29.15■■■□□ 2.26
HOMER3-205ENST00000542541 MSL1Q68DK7 614 aa29.15■■■□□ 2.26
HOMER3-205ENST00000542541 MTFR1LQ9H019 292 aa29.15■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms