RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 NGEFQ8N5V2 710 aa26.37■■□□□ 1.81
DDX11-220ENST00000542244 RBM46Q8TBY0 533 aaKnown RBP26.37■■□□□ 1.81
DDX11-220ENST00000542244 CCDC88AQ3V6T2 1871 aa26.36■■□□□ 1.81
DDX11-220ENST00000542244 DNAJC5GQ8N7S2 189 aa26.36■■□□□ 1.81
DDX11-220ENST00000542244 CLEC4GQ6UXB4 293 aa26.35■■□□□ 1.81
DDX11-220ENST00000542244 NBPF5PQ86XG9 351 aaPredicted RBP26.35■■□□□ 1.81
DDX11-220ENST00000542244 TIAM2Q8IVF5 1701 aa26.35■■□□□ 1.81
DDX11-220ENST00000542244 NIP7Q9Y221 180 aaKnown RBP eCLIP26.35■■□□□ 1.81
DDX11-220ENST00000542244 NPHP1O15259 732 aa26.34■■□□□ 1.81
DDX11-220ENST00000542244 ST5P78524 1137 aa26.34■■□□□ 1.81
DDX11-220ENST00000542244 PRPF40BQ6NWY9 871 aaKnown RBP26.34■■□□□ 1.81
DDX11-220ENST00000542244 CACNA1SQ13698 1873 aa26.34■■□□□ 1.81
DDX11-220ENST00000542244 LAMB4A4D0S4 1761 aa26.33■■□□□ 1.81
DDX11-220ENST00000542244 GLTPD2A6NH11 291 aa26.33■■□□□ 1.81
DDX11-220ENST00000542244 POTECB2RU33 542 aa26.33■■□□□ 1.81
DDX11-220ENST00000542244 APLP1P51693 650 aa26.33■■□□□ 1.81
DDX11-220ENST00000542244 STYK1Q6J9G0 422 aa26.33■■□□□ 1.81
DDX11-220ENST00000542244 OLFM4Q6UX06 510 aa26.33■■□□□ 1.81
DDX11-220ENST00000542244 TTLL7Q6ZT98 887 aa26.33■■□□□ 1.81
DDX11-220ENST00000542244 C16orf71Q8IYS4 520 aaPredicted RBP26.33■■□□□ 1.81
DDX11-220ENST00000542244 FER1L6Q2WGJ9 1857 aa26.33■■□□□ 1.81
DDX11-220ENST00000542244 TNRC6CQ9HCJ0 1690 aaKnown RBP26.32■■□□□ 1.8
DDX11-220ENST00000542244 DDX10Q13206 875 aaKnown RBP26.32■■□□□ 1.8
DDX11-220ENST00000542244 RRP7AQ9Y3A4 280 aaKnown RBP26.32■■□□□ 1.8
DDX11-220ENST00000542244 C7orf43Q8WVR3 580 aa26.31■■□□□ 1.8
DDX11-220ENST00000542244 MASTLQ96GX5 879 aa26.31■■□□□ 1.8
DDX11-220ENST00000542244 PDZRN3Q9UPQ7 1066 aa26.31■■□□□ 1.8
DDX11-220ENST00000542244 CNKSR1Q969H4 720 aa26.3■■□□□ 1.8
DDX11-220ENST00000542244 ZNF652Q9Y2D9 606 aa26.3■■□□□ 1.8
DDX11-220ENST00000542244 NEFMP07197 916 aa26.29■■□□□ 1.8
DDX11-220ENST00000542244 MYL6BP14649 208 aa26.29■■□□□ 1.8
DDX11-220ENST00000542244 SLC51AQ86UW1 340 aa26.29■■□□□ 1.8
DDX11-220ENST00000542244 ZC3H4Q9UPT8 1303 aaKnown RBP26.29■■□□□ 1.8
DDX11-220ENST00000542244 KLRG2A4D1S0 409 aaPredicted RBP26.28■■□□□ 1.8
DDX11-220ENST00000542244 PNISRQ8TF01 805 aaKnown RBP26.28■■□□□ 1.8
DDX11-220ENST00000542244 ABCC12Q96J65 1359 aa26.28■■□□□ 1.8
DDX11-220ENST00000542244 FSTL1Q12841 308 aa26.27■■□□□ 1.8
DDX11-220ENST00000542244 ERFEQ4G0M1 354 aa26.27■■□□□ 1.8
DDX11-220ENST00000542244 NUTM1Q86Y26 1132 aa26.27■■□□□ 1.8
DDX11-220ENST00000542244 MAPK8IP3Q9UPT6 1336 aa26.27■■□□□ 1.8
DDX11-220ENST00000542244 WDR90Q96KV7 1748 aa26.27■■□□□ 1.8
DDX11-220ENST00000542244 ARFGEF2Q9Y6D5 1785 aa26.26■■□□□ 1.79
DDX11-220ENST00000542244 TPTE2Q6XPS3 522 aa26.26■■□□□ 1.79
DDX11-220ENST00000542244 TAOK3Q9H2K8 898 aa26.26■■□□□ 1.79
DDX11-220ENST00000542244 UBN2Q6ZU65 1347 aa26.25■■□□□ 1.79
DDX11-220ENST00000542244 LTBP3Q9NS15 1303 aa26.25■■□□□ 1.79
DDX11-220ENST00000542244 RIPK4P57078 832 aa26.25■■□□□ 1.79
DDX11-220ENST00000542244 CCDC146Q8IYE0 955 aa26.25■■□□□ 1.79
DDX11-220ENST00000542244 ZBTB3Q9H5J0 574 aa26.25■■□□□ 1.79
DDX11-220ENST00000542244 MAP3K15Q6ZN16 1313 aa26.24■■□□□ 1.79
DDX11-220ENST00000542244 VEGFAP15692 232 aaPredicted RBP26.24■■□□□ 1.79
DDX11-220ENST00000542244 NPR1P16066 1061 aa26.24■■□□□ 1.79
DDX11-220ENST00000542244 GPTP24298 496 aa26.24■■□□□ 1.79
DDX11-220ENST00000542244 RALBP1Q15311 655 aa26.24■■□□□ 1.79
DDX11-220ENST00000542244 LRP10Q7Z4F1 713 aa26.24■■□□□ 1.79
DDX11-220ENST00000542244 RGL2O15211 777 aa26.23■■□□□ 1.79
DDX11-220ENST00000542244 ANXA1P04083 346 aa26.23■■□□□ 1.79
DDX11-220ENST00000542244 TMPOP42166 694 aaKnown RBP26.23■■□□□ 1.79
DDX11-220ENST00000542244 PDIA6Q15084 440 aa26.23■■□□□ 1.79
DDX11-220ENST00000542244 PROSER3Q2NL68 480 aa26.23■■□□□ 1.79
DDX11-220ENST00000542244 TSPYL4Q9UJ04 414 aa26.23■■□□□ 1.79
DDX11-220ENST00000542244 DICER1Q9UPY3 1922 aaKnown RBP26.22■■□□□ 1.79
DDX11-220ENST00000542244 DDNO94850 711 aaPredicted RBP26.22■■□□□ 1.79
DDX11-220ENST00000542244 NUP98P52948 1817 aa26.21■■□□□ 1.79
DDX11-220ENST00000542244 ERVV-1B6SEH8 477 aa26.21■■□□□ 1.79
DDX11-220ENST00000542244 POTEIP0CG38 1075 aa26.21■■□□□ 1.79
DDX11-220ENST00000542244 POTEJP0CG39 1038 aa26.21■■□□□ 1.79
DDX11-220ENST00000542244 SUSD4Q5VX71 490 aa26.21■■□□□ 1.79
DDX11-220ENST00000542244 SMC1BQ8NDV3 1235 aa26.21■■□□□ 1.79
DDX11-220ENST00000542244 KRT24Q2M2I5 525 aa26.2■■□□□ 1.78
DDX11-220ENST00000542244 C3orf67Q6ZVT6 689 aa26.2■■□□□ 1.78
DDX11-220ENST00000542244 ZNF277Q9NRM2 450 aaPredicted RBP26.2■■□□□ 1.78
DDX11-220ENST00000542244 EIF2S2P20042 333 aaKnown RBP26.19■■□□□ 1.78
DDX11-220ENST00000542244 NEUROD2Q15784 382 aa26.19■■□□□ 1.78
DDX11-220ENST00000542244 PNNQ9H307 717 aaKnown RBP26.19■■□□□ 1.78
DDX11-220ENST00000542244 CCDC93Q567U6 631 aa26.18■■□□□ 1.78
DDX11-220ENST00000542244 ZNF34Q8IZ26 560 aa26.18■■□□□ 1.78
DDX11-220ENST00000542244 NECTIN2Q92692 538 aa26.18■■□□□ 1.78
DDX11-220ENST00000542244 MYBBP1AQ9BQG0 1328 aaKnown RBP26.17■■□□□ 1.78
DDX11-220ENST00000542244 GTF2E1P29083 439 aaPredicted RBP26.17■■□□□ 1.78
DDX11-220ENST00000542244 DPY19L2Q6NUT2 758 aa26.17■■□□□ 1.78
DDX11-220ENST00000542244 KIF6Q6ZMV9 814 aa26.17■■□□□ 1.78
DDX11-220ENST00000542244 SNED1Q8TER0 1413 aa26.16■■□□□ 1.78
DDX11-220ENST00000542244 CRY2Q49AN0 593 aa26.16■■□□□ 1.78
DDX11-220ENST00000542244 KLRG1Q96E93 195 aa26.16■■□□□ 1.78
DDX11-220ENST00000542244 TRIM35Q9UPQ4 493 aa26.16■■□□□ 1.78
DDX11-220ENST00000542244 ZNF541Q9H0D2 1346 aa26.15■■□□□ 1.78
DDX11-220ENST00000542244 NTSR2O95665 410 aa26.15■■□□□ 1.78
DDX11-220ENST00000542244 FKBP4Q02790 459 aaKnown RBP eCLIP26.15■■□□□ 1.78
DDX11-220ENST00000542244 SOGA3Q5TF21 947 aa26.15■■□□□ 1.78
DDX11-220ENST00000542244 GIGYF2Q6Y7W6 1299 aaKnown RBP26.14■■□□□ 1.78
DDX11-220ENST00000542244 IFFO2Q5TF58 517 aa26.13■■□□□ 1.77
DDX11-220ENST00000542244 COL4A5P29400 1685 aa26.12■■□□□ 1.77
DDX11-220ENST00000542244 SYNE4Q8N205 404 aa26.12■■□□□ 1.77
DDX11-220ENST00000542244 ZNF428Q96B54 188 aa26.12■■□□□ 1.77
DDX11-220ENST00000542244 NYXQ9GZU5 481 aa26.12■■□□□ 1.77
DDX11-220ENST00000542244 ADAMTS8Q9UP79 889 aa26.12■■□□□ 1.77
DDX11-220ENST00000542244 ERBB4Q15303 1308 aa26.12■■□□□ 1.77
DDX11-220ENST00000542244 TCERG1O14776 1098 aaKnown RBP26.1■■□□□ 1.77
DDX11-220ENST00000542244 CHL1O00533 1208 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms