RNA–Protein interactions for RNA: ENST00000542107.5

CX3CR1-206, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 4 BASIC

Gene CX3CR1, Length 3,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-206ENST00000542107 ADCK5Q3MIX3 580 aa12.11□□□□□ -0.47
CX3CR1-206ENST00000542107 AMOTQ4VCS5 1084 aa12.11□□□□□ -0.47
CX3CR1-206ENST00000542107 TCEANC2Q96MN5 208 aa12.11□□□□□ -0.47
CX3CR1-206ENST00000542107 SMC3Q9UQE7 1217 aa12.11□□□□□ -0.47
CX3CR1-206ENST00000542107 CNPY2Q9Y2B0 182 aa12.11□□□□□ -0.47
CX3CR1-206ENST00000542107 FIBPO43427 364 aa12.11□□□□□ -0.47
CX3CR1-206ENST00000542107 LARGE1O95461 756 aa12.11□□□□□ -0.47
CX3CR1-206ENST00000542107 MBD3O95983 291 aa12.11□□□□□ -0.47
CX3CR1-206ENST00000542107 RUFY3Q7L099 469 aa12.11□□□□□ -0.47
CX3CR1-206ENST00000542107 ARHGEF25Q86VW2 580 aa12.11□□□□□ -0.47
CX3CR1-206ENST00000542107 BICC1Q9H694 974 aaKnown RBP12.11□□□□□ -0.47
CX3CR1-206ENST00000542107 ZSCAN30Q86W11 494 aa12.11□□□□□ -0.47
CX3CR1-206ENST00000542107 FAM227BQ96M60 508 aa12.11□□□□□ -0.47
CX3CR1-206ENST00000542107 AOX1Q06278 1338 aa12.11□□□□□ -0.47
CX3CR1-206ENST00000542107 WDR33Q9C0J8 1336 aaKnown RBP12.11□□□□□ -0.47
CX3CR1-206ENST00000542107 CSB-PGBD3P0DP91 1061 aa12.1□□□□□ -0.47
CX3CR1-206ENST00000542107 KRT28Q7Z3Y7 464 aa12.1□□□□□ -0.47
CX3CR1-206ENST00000542107 NECAB1Q8N987 351 aa12.1□□□□□ -0.47
CX3CR1-206ENST00000542107 HOXB7P09629 217 aa12.1□□□□□ -0.47
CX3CR1-206ENST00000542107 GPATCH3Q96I76 525 aa12.1□□□□□ -0.47
CX3CR1-206ENST00000542107 CHMP4AQ9BY43 222 aa12.1□□□□□ -0.47
CX3CR1-206ENST00000542107 TLR7Q9NYK1 1049 aaKnown RBP12.1□□□□□ -0.47
CX3CR1-206ENST00000542107 LIMCH1Q9UPQ0 1083 aa12.1□□□□□ -0.47
CX3CR1-206ENST00000542107 GRM8O00222 908 aa12.09□□□□□ -0.47
CX3CR1-206ENST00000542107 PTMAP06454 111 aaKnown RBP12.09□□□□□ -0.47
CX3CR1-206ENST00000542107 PLCB2Q00722 1185 aa12.09□□□□□ -0.47
CX3CR1-206ENST00000542107 NFATC2IPQ8NCF5 419 aa12.09□□□□□ -0.47
CX3CR1-206ENST00000542107 RUFY2Q8WXA3 655 aa12.09□□□□□ -0.47
CX3CR1-206ENST00000542107 EAF2Q96CJ1 260 aaPredicted RBP12.09□□□□□ -0.47
CX3CR1-206ENST00000542107 PDRG1Q9NUG6 133 aa12.09□□□□□ -0.47
CX3CR1-206ENST00000542107 VPS37CA5D8V6 355 aaPredicted RBP12.09□□□□□ -0.47
CX3CR1-206ENST00000542107 SYT1P21579 422 aa12.09□□□□□ -0.47
CX3CR1-206ENST00000542107 PROSER2Q86WR7 435 aaPredicted RBP12.09□□□□□ -0.47
CX3CR1-206ENST00000542107 CABLES1Q8TDN4 633 aa12.09□□□□□ -0.47
CX3CR1-206ENST00000542107 EDC3Q96F86 508 aaKnown RBP12.09□□□□□ -0.47
CX3CR1-206ENST00000542107 CHMP3Q9Y3E7 222 aa12.09□□□□□ -0.47
CX3CR1-206ENST00000542107 RAPGEF4Q8WZA2 1011 aa12.09□□□□□ -0.47
CX3CR1-206ENST00000542107 MYD88Q99836 296 aa12.09□□□□□ -0.47
CX3CR1-206ENST00000542107 NDUFB9Q9Y6M9 179 aa12.09□□□□□ -0.47
CX3CR1-206ENST00000542107 SASH1O94885 1247 aa12.08□□□□□ -0.48
CX3CR1-206ENST00000542107 DDX58O95786 925 aaKnown RBP12.08□□□□□ -0.48
CX3CR1-206ENST00000542107 TSPY26PQ9H489 355 aa12.08□□□□□ -0.48
CX3CR1-206ENST00000542107 STX6O43752 255 aa12.08□□□□□ -0.48
CX3CR1-206ENST00000542107 ALDH1L1O75891 902 aa12.08□□□□□ -0.48
CX3CR1-206ENST00000542107 COL9A3Q14050 684 aaPredicted RBP12.08□□□□□ -0.48
CX3CR1-206ENST00000542107 COPS6Q7L5N1 327 aa12.08□□□□□ -0.48
CX3CR1-206ENST00000542107 XAGE3Q8WTP9 111 aa12.08□□□□□ -0.48
CX3CR1-206ENST00000542107 FSD1Q9BTV5 496 aa12.08□□□□□ -0.48
CX3CR1-206ENST00000542107 HYPKQ9NX55 129 aa12.08□□□□□ -0.48
CX3CR1-206ENST00000542107 XRN1Q8IZH2 1706 aaKnown RBP12.07□□□□□ -0.48
CX3CR1-206ENST00000542107 GJB2P29033 226 aa12.07□□□□□ -0.48
CX3CR1-206ENST00000542107 NMIQ13287 307 aaPredicted RBP12.07□□□□□ -0.48
CX3CR1-206ENST00000542107 LINS1Q8NG48 757 aa12.07□□□□□ -0.48
CX3CR1-206ENST00000542107 KAZALD1Q96I82 304 aa12.07□□□□□ -0.48
CX3CR1-206ENST00000542107 TTC14Q96N46 770 aa12.07□□□□□ -0.48
CX3CR1-206ENST00000542107 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.07□□□□□ -0.48
CX3CR1-206ENST00000542107 PXDNQ92626 1479 aa12.07□□□□□ -0.48
CX3CR1-206ENST00000542107 TTC41PQ6P2S7 1318 aa12.07□□□□□ -0.48
CX3CR1-206ENST00000542107 CHRNA2Q15822 529 aa12.07□□□□□ -0.48
CX3CR1-206ENST00000542107 FERMT3Q86UX7 667 aa12.07□□□□□ -0.48
CX3CR1-206ENST00000542107 SYAP1Q96A49 352 aaPredicted RBP12.07□□□□□ -0.48
CX3CR1-206ENST00000542107 CYP46A1Q9Y6A2 500 aa12.07□□□□□ -0.48
CX3CR1-206ENST00000542107 ATP5J2-PTCD1G3V325 749 aa12.07□□□□□ -0.48
CX3CR1-206ENST00000542107 PTCD1O75127 700 aaKnown RBP12.07□□□□□ -0.48
CX3CR1-206ENST00000542107 ZSCAN22P10073 491 aaPredicted RBP12.07□□□□□ -0.48
CX3CR1-206ENST00000542107 ZKSCAN1P17029 563 aaPredicted RBP12.07□□□□□ -0.48
CX3CR1-206ENST00000542107 RBM8AQ9Y5S9 174 aaKnown RBP12.07□□□□□ -0.48
CX3CR1-206ENST00000542107 FAM208AQ9UK61 1670 aaKnown RBP12.06□□□□□ -0.48
CX3CR1-206ENST00000542107 NEXNQ0ZGT2 675 aa12.06□□□□□ -0.48
CX3CR1-206ENST00000542107 STK3Q13188 491 aa12.06□□□□□ -0.48
CX3CR1-206ENST00000542107 ERC1Q8IUD2 1116 aa12.06□□□□□ -0.48
CX3CR1-206ENST00000542107 DDX21Q9NR30 783 aaKnown RBP eCLIP12.06□□□□□ -0.48
CX3CR1-206ENST00000542107 PXDNLA1KZ92 1463 aa12.06□□□□□ -0.48
CX3CR1-206ENST00000542107 IGKV5-2P06315 115 aa12.06□□□□□ -0.48
CX3CR1-206ENST00000542107 EPHA10Q5JZY3 1008 aa12.06□□□□□ -0.48
CX3CR1-206ENST00000542107 EVI5LQ96CN4 794 aa12.06□□□□□ -0.48
CX3CR1-206ENST00000542107 DNM1Q05193 864 aaKnown RBP12.05□□□□□ -0.48
CX3CR1-206ENST00000542107 FAM173BQ6P4H8 233 aa12.05□□□□□ -0.48
CX3CR1-206ENST00000542107 ZNF790Q6PG37 636 aa12.05□□□□□ -0.48
CX3CR1-206ENST00000542107 R3HCC1Q9Y3T6 440 aaKnown RBP12.05□□□□□ -0.48
CX3CR1-206ENST00000542107 USP16Q9Y5T5 823 aa12.05□□□□□ -0.48
CX3CR1-206ENST00000542107 RPAP1Q9BWH6 1393 aaPredicted RBP12.05□□□□□ -0.48
CX3CR1-206ENST00000542107 A0A0D9SFI3 127 aa12.05□□□□□ -0.48
CX3CR1-206ENST00000542107 CHGBP05060 677 aa12.05□□□□□ -0.48
CX3CR1-206ENST00000542107 MTX1Q13505 466 aa12.05□□□□□ -0.48
CX3CR1-206ENST00000542107 ME3Q16798 604 aa12.05□□□□□ -0.48
CX3CR1-206ENST00000542107 CREB3L3Q68CJ9 461 aa12.05□□□□□ -0.48
CX3CR1-206ENST00000542107 ZNF496Q96IT1 587 aaPredicted RBP12.05□□□□□ -0.48
CX3CR1-206ENST00000542107 TAF6LQ9Y6J9 622 aa12.05□□□□□ -0.48
CX3CR1-206ENST00000542107 F13A1P00488 732 aa12.04□□□□□ -0.48
CX3CR1-206ENST00000542107 PDIA6Q15084 440 aa12.04□□□□□ -0.48
CX3CR1-206ENST00000542107 HDAC5Q9UQL6 1122 aa12.04□□□□□ -0.48
CX3CR1-206ENST00000542107 CCDC171Q6TFL3 1326 aa12.04□□□□□ -0.48
CX3CR1-206ENST00000542107 LARP1Q6PKG0 1096 aaKnown RBP12.04□□□□□ -0.48
CX3CR1-206ENST00000542107 DNAJC2Q99543 621 aaKnown RBP12.04□□□□□ -0.48
CX3CR1-206ENST00000542107 LRRC37A3O60309 1634 aa12.04□□□□□ -0.48
CX3CR1-206ENST00000542107 HCLS1P14317 486 aaPredicted RBP12.03□□□□□ -0.48
CX3CR1-206ENST00000542107 TATP17735 454 aaPredicted RBP12.03□□□□□ -0.48
CX3CR1-206ENST00000542107 GIMAP6Q6P9H5 292 aa12.03□□□□□ -0.48
CX3CR1-206ENST00000542107 TTC5Q8N0Z6 440 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms