RNA–Protein interactions for RNA: ENST00000542095.6

NECAP1-206, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 2,385 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-206ENST00000542095 SUCLG2Q96I99 432 aa13.23□□□□□ -0.29
NECAP1-206ENST00000542095 NEURL1BA8MQ27 555 aa13.23□□□□□ -0.29
NECAP1-206ENST00000542095 ST18O60284 1047 aa13.23□□□□□ -0.29
NECAP1-206ENST00000542095 IL2RBP14784 551 aa13.23□□□□□ -0.29
NECAP1-206ENST00000542095 MCCP23508 829 aa13.23□□□□□ -0.29
NECAP1-206ENST00000542095 ANKRD13DQ6ZTN6 518 aa13.23□□□□□ -0.29
NECAP1-206ENST00000542095 CLASRPQ8N2M8 674 aaKnown RBP13.23□□□□□ -0.29
NECAP1-206ENST00000542095 PI4K2BQ8TCG2 481 aa13.23□□□□□ -0.29
NECAP1-206ENST00000542095 TTC41PQ6P2S7 1318 aa13.22□□□□□ -0.29
NECAP1-206ENST00000542095 USP42Q9H9J4 1324 aaKnown RBP13.22□□□□□ -0.29
NECAP1-206ENST00000542095 ERVV-2B6SEH9 535 aa13.22□□□□□ -0.29
NECAP1-206ENST00000542095 LRP10Q7Z4F1 713 aa13.22□□□□□ -0.29
NECAP1-206ENST00000542095 MYD88Q99836 296 aa13.22□□□□□ -0.29
NECAP1-206ENST00000542095 MCM4P33991 863 aa13.22□□□□□ -0.29
NECAP1-206ENST00000542095 EVA1CP58658 441 aa13.22□□□□□ -0.29
NECAP1-206ENST00000542095 NKX1-1Q15270 411 aaPredicted RBP13.22□□□□□ -0.29
NECAP1-206ENST00000542095 UNC5CLQ8IV45 518 aa13.22□□□□□ -0.29
NECAP1-206ENST00000542095 BICC1Q9H694 974 aaKnown RBP13.22□□□□□ -0.29
NECAP1-206ENST00000542095 ERBB4Q15303 1308 aa13.21□□□□□ -0.29
NECAP1-206ENST00000542095 GCKRQ14397 625 aa13.21□□□□□ -0.29
NECAP1-206ENST00000542095 CNTROBQ8N137 903 aa13.21□□□□□ -0.29
NECAP1-206ENST00000542095 KAZALD1Q96I82 304 aa13.21□□□□□ -0.29
NECAP1-206ENST00000542095 EPB41L2O43491 1005 aaKnown RBP13.21□□□□□ -0.3
NECAP1-206ENST00000542095 GPATCH3Q96I76 525 aa13.21□□□□□ -0.3
NECAP1-206ENST00000542095 STRN4Q9NRL3 753 aa13.21□□□□□ -0.3
NECAP1-206ENST00000542095 GLRX3O76003 335 aaKnown RBP13.2□□□□□ -0.3
NECAP1-206ENST00000542095 PA2G4Q9UQ80 394 aaKnown RBP13.2□□□□□ -0.3
NECAP1-206ENST00000542095 G3BP1Q13283 466 aaKnown RBP eCLIP13.2□□□□□ -0.3
NECAP1-206ENST00000542095 ANO2Q9NQ90 1003 aa13.2□□□□□ -0.3
NECAP1-206ENST00000542095 NUP188Q5SRE5 1749 aa13.19□□□□□ -0.3
NECAP1-206ENST00000542095 KCPQ6ZWJ8 1503 aa13.19□□□□□ -0.3
NECAP1-206ENST00000542095 IFIT2P09913 472 aaKnown RBP13.19□□□□□ -0.3
NECAP1-206ENST00000542095 ANAPC15P60006 121 aa13.19□□□□□ -0.3
NECAP1-206ENST00000542095 RAB3GAP1Q15042 981 aa13.19□□□□□ -0.3
NECAP1-206ENST00000542095 FOXD4L1Q9NU39 408 aa13.19□□□□□ -0.3
NECAP1-206ENST00000542095 TOGARAM1Q9Y4F4 1720 aa13.19□□□□□ -0.3
NECAP1-206ENST00000542095 DDX11L8A8MPP1 907 aa13.18□□□□□ -0.3
NECAP1-206ENST00000542095 PIP4K2AP48426 406 aaPredicted RBP13.18□□□□□ -0.3
NECAP1-206ENST00000542095 PLBD2Q8NHP8 589 aa13.18□□□□□ -0.3
NECAP1-206ENST00000542095 MAP4K4O95819 1239 aaPredicted RBP13.18□□□□□ -0.3
NECAP1-206ENST00000542095 DDX54Q8TDD1 881 aaKnown RBP13.18□□□□□ -0.3
NECAP1-206ENST00000542095 ECHDC1Q9NTX5 307 aa13.18□□□□□ -0.3
NECAP1-206ENST00000542095 COL15A1P39059 1388 aa13.18□□□□□ -0.3
NECAP1-206ENST00000542095 GBP4Q96PP9 640 aa13.17□□□□□ -0.3
NECAP1-206ENST00000542095 COL14A1Q05707 1796 aaKnown RBP13.17□□□□□ -0.3
NECAP1-206ENST00000542095 AACSQ86V21 672 aa13.17□□□□□ -0.3
NECAP1-206ENST00000542095 TNPO1Q92973 898 aaKnown RBP13.17□□□□□ -0.3
NECAP1-206ENST00000542095 MCM2P49736 904 aa13.16□□□□□ -0.3
NECAP1-206ENST00000542095 IL17RAQ96F46 866 aa13.16□□□□□ -0.3
NECAP1-206ENST00000542095 TNS2Q63HR2 1409 aa13.16□□□□□ -0.3
NECAP1-206ENST00000542095 SASH1O94885 1247 aa13.16□□□□□ -0.3
NECAP1-206ENST00000542095 ITGB4P16144 1822 aa13.16□□□□□ -0.3
NECAP1-206ENST00000542095 SGSM2O43147 1006 aa13.15□□□□□ -0.3
NECAP1-206ENST00000542095 IL27Q8NEV9 243 aa13.15□□□□□ -0.3
NECAP1-206ENST00000542095 CWC22Q9HCG8 908 aaKnown RBP13.15□□□□□ -0.3
NECAP1-206ENST00000542095 NBPF26B4DH59 902 aa13.15□□□□□ -0.3
NECAP1-206ENST00000542095 NEK4P51957 841 aa13.15□□□□□ -0.3
NECAP1-206ENST00000542095 EPHA10Q5JZY3 1008 aa13.15□□□□□ -0.3
NECAP1-206ENST00000542095 NBPF14Q5TI25 921 aa13.15□□□□□ -0.3
NECAP1-206ENST00000542095 NBPF10Q6P3W6 841 aaKnown RBP13.15□□□□□ -0.3
NECAP1-206ENST00000542095 UBE3BQ7Z3V4 1068 aa13.15□□□□□ -0.3
NECAP1-206ENST00000542095 NBPF15Q8N660 670 aa13.15□□□□□ -0.3
NECAP1-206ENST00000542095 RUFY2Q8WXA3 655 aa13.15□□□□□ -0.3
NECAP1-206ENST00000542095 ROBO1Q9Y6N7 1651 aa13.15□□□□□ -0.3
NECAP1-206ENST00000542095 A0A087WZG4 1122 aa13.14□□□□□ -0.31
NECAP1-206ENST00000542095 PTMSP20962 102 aa13.14□□□□□ -0.31
NECAP1-206ENST00000542095 TJP1Q07157 1748 aa13.14□□□□□ -0.31
NECAP1-206ENST00000542095 RABL6Q3YEC7 729 aaPredicted RBP13.14□□□□□ -0.31
NECAP1-206ENST00000542095 EVI5LQ96CN4 794 aa13.14□□□□□ -0.31
NECAP1-206ENST00000542095 SIL1Q9H173 461 aa13.14□□□□□ -0.31
NECAP1-206ENST00000542095 COPRSQ9NQ92 184 aa13.14□□□□□ -0.31
NECAP1-206ENST00000542095 DIAPH3Q9NSV4 1193 aa13.14□□□□□ -0.31
NECAP1-206ENST00000542095 PALD1Q9ULE6 856 aa13.14□□□□□ -0.31
NECAP1-206ENST00000542095 COL22A1Q8NFW1 1626 aaPredicted RBP13.14□□□□□ -0.31
NECAP1-206ENST00000542095 RAD50Q92878 1312 aa13.14□□□□□ -0.31
NECAP1-206ENST00000542095 ATP5J2-PTCD1G3V325 749 aa13.14□□□□□ -0.31
NECAP1-206ENST00000542095 PTCD1O75127 700 aaKnown RBP13.14□□□□□ -0.31
NECAP1-206ENST00000542095 HSPA4P34932 840 aa13.14□□□□□ -0.31
NECAP1-206ENST00000542095 NUCB2P80303 420 aa13.14□□□□□ -0.31
NECAP1-206ENST00000542095 KIAA1211Q6ZU35 1233 aa13.14□□□□□ -0.31
NECAP1-206ENST00000542095 IL25Q9H293 177 aa13.14□□□□□ -0.31
NECAP1-206ENST00000542095 TMOD3Q9NYL9 352 aa13.14□□□□□ -0.31
NECAP1-206ENST00000542095 PLCH1Q4KWH8 1693 aa13.13□□□□□ -0.31
NECAP1-206ENST00000542095 TRAK2O60296 914 aa13.13□□□□□ -0.31
NECAP1-206ENST00000542095 EAF2Q96CJ1 260 aaPredicted RBP13.13□□□□□ -0.31
NECAP1-206ENST00000542095 BTG4Q9NY30 223 aa13.13□□□□□ -0.31
NECAP1-206ENST00000542095 WNK3Q9BYP7 1800 aa13.13□□□□□ -0.31
NECAP1-206ENST00000542095 CWC27Q6UX04 472 aaKnown RBP13.13□□□□□ -0.31
NECAP1-206ENST00000542095 AHDC1Q5TGY3 1603 aaPredicted RBP13.13□□□□□ -0.31
NECAP1-206ENST00000542095 A1BGP04217 495 aa13.12□□□□□ -0.31
NECAP1-206ENST00000542095 RFX5P48382 616 aaPredicted RBP13.12□□□□□ -0.31
NECAP1-206ENST00000542095 CASP7P55210 303 aa13.12□□□□□ -0.31
NECAP1-206ENST00000542095 KLHDC4Q8TBB5 520 aa13.12□□□□□ -0.31
NECAP1-206ENST00000542095 JARID2Q92833 1246 aaPredicted RBP13.12□□□□□ -0.31
NECAP1-206ENST00000542095 CCDC8Q9H0W5 538 aaPredicted RBP13.12□□□□□ -0.31
NECAP1-206ENST00000542095 HIP1O00291 1037 aa13.12□□□□□ -0.31
NECAP1-206ENST00000542095 SSFA2P28290 1259 aa13.12□□□□□ -0.31
NECAP1-206ENST00000542095 TTLL7Q6ZT98 887 aa13.12□□□□□ -0.31
NECAP1-206ENST00000542095 LSG1Q9H089 658 aaKnown RBP13.12□□□□□ -0.31
NECAP1-206ENST00000542095 CWC25Q9NXE8 425 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms