RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 ACSBG1Q96GR2 724 aa11.08□□□□□ -0.63
THBS3-211ENST00000541990 GADD45BO75293 160 aaPredicted RBP11.08□□□□□ -0.64
THBS3-211ENST00000541990 PTMAP06454 111 aaKnown RBP11.08□□□□□ -0.64
THBS3-211ENST00000541990 BRPF1P55201 1214 aaPredicted RBP11.08□□□□□ -0.64
THBS3-211ENST00000541990 SMAP1Q8IYB5 467 aaPredicted RBP11.08□□□□□ -0.64
THBS3-211ENST00000541990 ZCRB1Q8TBF4 217 aaKnown RBP11.08□□□□□ -0.64
THBS3-211ENST00000541990 ZNF496Q96IT1 587 aaPredicted RBP11.08□□□□□ -0.64
THBS3-211ENST00000541990 DCTPP1Q9H773 170 aa11.08□□□□□ -0.64
THBS3-211ENST00000541990 USP16Q9Y5T5 823 aa11.08□□□□□ -0.64
THBS3-211ENST00000541990 KIF24Q5T7B8 1368 aa11.08□□□□□ -0.64
THBS3-211ENST00000541990 KIF1AQ12756 1690 aa11.08□□□□□ -0.64
THBS3-211ENST00000541990 AMOTQ4VCS5 1084 aa11.08□□□□□ -0.64
THBS3-211ENST00000541990 ROBO1Q9Y6N7 1651 aa11.08□□□□□ -0.64
THBS3-211ENST00000541990 KCNQ4P56696 695 aa11.07□□□□□ -0.64
THBS3-211ENST00000541990 CSPP1Q1MSJ5 1256 aa11.07□□□□□ -0.64
THBS3-211ENST00000541990 INTS3Q68E01 1043 aaKnown RBP11.07□□□□□ -0.64
THBS3-211ENST00000541990 MEIS3Q99687 375 aa11.07□□□□□ -0.64
THBS3-211ENST00000541990 TTC12Q9H892 705 aaPredicted RBP11.07□□□□□ -0.64
THBS3-211ENST00000541990 ST18O60284 1047 aa11.07□□□□□ -0.64
THBS3-211ENST00000541990 IL2RBP14784 551 aa11.07□□□□□ -0.64
THBS3-211ENST00000541990 IFNL2Q8IZJ0 200 aa11.07□□□□□ -0.64
THBS3-211ENST00000541990 TMX3Q96JJ7 454 aa11.07□□□□□ -0.64
THBS3-211ENST00000541990 SPG7Q9UQ90 795 aa11.07□□□□□ -0.64
THBS3-211ENST00000541990 ATP10DQ9P241 1426 aa11.06□□□□□ -0.64
THBS3-211ENST00000541990 CABP4P57796 275 aa11.06□□□□□ -0.64
THBS3-211ENST00000541990 DNTTIP2Q5QJE6 756 aaKnown RBP11.06□□□□□ -0.64
THBS3-211ENST00000541990 ARHGAP45Q92619 1136 aa11.06□□□□□ -0.64
THBS3-211ENST00000541990 CWC22Q9HCG8 908 aaKnown RBP11.06□□□□□ -0.64
THBS3-211ENST00000541990 ZSCAN20P17040 1043 aaPredicted RBP11.06□□□□□ -0.64
THBS3-211ENST00000541990 HSPA1LP34931 641 aa11.06□□□□□ -0.64
THBS3-211ENST00000541990 NGLY1Q96IV0 654 aa11.06□□□□□ -0.64
THBS3-211ENST00000541990 PALD1Q9ULE6 856 aa11.06□□□□□ -0.64
THBS3-211ENST00000541990 KDM6AO15550 1401 aaPredicted RBP11.06□□□□□ -0.64
THBS3-211ENST00000541990 COL5A2P05997 1499 aaPredicted RBP11.06□□□□□ -0.64
THBS3-211ENST00000541990 DTNBO60941 627 aa11.05□□□□□ -0.64
THBS3-211ENST00000541990 NEK4P51957 841 aa11.05□□□□□ -0.64
THBS3-211ENST00000541990 CBX1P83916 185 aa11.05□□□□□ -0.64
THBS3-211ENST00000541990 KIAA2012Q0VF49 1180 aa11.05□□□□□ -0.64
THBS3-211ENST00000541990 FLIIQ13045 1269 aa11.05□□□□□ -0.64
THBS3-211ENST00000541990 CCDC94Q9BW85 323 aaPredicted RBP11.05□□□□□ -0.64
THBS3-211ENST00000541990 STK31Q9BXU1 1019 aa11.05□□□□□ -0.64
THBS3-211ENST00000541990 USP25Q9UHP3 1055 aa11.05□□□□□ -0.64
THBS3-211ENST00000541990 CEMIPQ8WUJ3 1361 aa11.05□□□□□ -0.64
THBS3-211ENST00000541990 MCM5P33992 734 aa11.05□□□□□ -0.64
THBS3-211ENST00000541990 ZNF790Q6PG37 636 aa11.05□□□□□ -0.64
THBS3-211ENST00000541990 TSPY26PQ9H489 355 aa11.05□□□□□ -0.64
THBS3-211ENST00000541990 SLC52A2Q9HAB3 445 aa11.05□□□□□ -0.64
THBS3-211ENST00000541990 ATP2B3Q16720 1220 aa11.05□□□□□ -0.64
THBS3-211ENST00000541990 FAM98CQ17RN3 349 aaKnown RBP11.05□□□□□ -0.64
THBS3-211ENST00000541990 SMIM5Q71RC9 77 aa11.05□□□□□ -0.64
THBS3-211ENST00000541990 PTF1AQ7RTS3 328 aa11.05□□□□□ -0.64
THBS3-211ENST00000541990 MYRIPQ8NFW9 859 aa11.05□□□□□ -0.64
THBS3-211ENST00000541990 ASAP1Q9ULH1 1129 aa11.05□□□□□ -0.64
THBS3-211ENST00000541990 CPDO75976 1380 aa11.04□□□□□ -0.64
THBS3-211ENST00000541990 BRD1O95696 1058 aa11.04□□□□□ -0.64
THBS3-211ENST00000541990 CEP85Q6P2H3 762 aa11.04□□□□□ -0.64
THBS3-211ENST00000541990 PI4KAP2A4QPH2 592 aa11.04□□□□□ -0.64
THBS3-211ENST00000541990 GIGYF1O75420 1035 aaPredicted RBP11.04□□□□□ -0.64
THBS3-211ENST00000541990 PI4KAP1Q8N8J0 262 aa11.04□□□□□ -0.64
THBS3-211ENST00000541990 PHRF1Q9P1Y6 1649 aaKnown RBP11.04□□□□□ -0.64
THBS3-211ENST00000541990 UTRNP46939 3433 aa11.04□□□□□ -0.64
THBS3-211ENST00000541990 CARD10Q9BWT7 1032 aa11.03□□□□□ -0.64
THBS3-211ENST00000541990 HTATSF1O43719 755 aaKnown RBP11.03□□□□□ -0.64
THBS3-211ENST00000541990 DMTNQ08495 405 aa11.03□□□□□ -0.64
THBS3-211ENST00000541990 ANKRD44Q8N8A2 993 aa11.03□□□□□ -0.64
THBS3-211ENST00000541990 A1BGP04217 495 aa11.02□□□□□ -0.64
THBS3-211ENST00000541990 CWF19L2Q2TBE0 894 aaKnown RBP11.02□□□□□ -0.64
THBS3-211ENST00000541990 CCDC30Q5VVM6 783 aa11.02□□□□□ -0.64
THBS3-211ENST00000541990 UPF3BQ9BZI7 483 aaKnown RBP11.02□□□□□ -0.65
THBS3-211ENST00000541990 API5Q9BZZ5 524 aaKnown RBP11.02□□□□□ -0.65
THBS3-211ENST00000541990 COL18A1P39060 1754 aa11.02□□□□□ -0.65
THBS3-211ENST00000541990 RGS12O14924 1447 aa11.02□□□□□ -0.65
THBS3-211ENST00000541990 SPDYE4A6NLX3 237 aa11.02□□□□□ -0.65
THBS3-211ENST00000541990 ERC2O15083 957 aa11.02□□□□□ -0.65
THBS3-211ENST00000541990 KCNQ2O43526 872 aa11.02□□□□□ -0.65
THBS3-211ENST00000541990 MBD3O95983 291 aa11.02□□□□□ -0.65
THBS3-211ENST00000541990 NOLC1Q14978 699 aaKnown RBP eCLIP11.02□□□□□ -0.65
THBS3-211ENST00000541990 IGSF3O75054 1194 aa11.01□□□□□ -0.65
THBS3-211ENST00000541990 MTERF4Q7Z6M4 381 aaKnown RBP11.01□□□□□ -0.65
THBS3-211ENST00000541990 USP48Q86UV5 1035 aa11.01□□□□□ -0.65
THBS3-211ENST00000541990 TTC5Q8N0Z6 440 aa11.01□□□□□ -0.65
THBS3-211ENST00000541990 PIBF1Q8WXW3 757 aa11.01□□□□□ -0.65
THBS3-211ENST00000541990 CHMP4BQ9H444 224 aaKnown RBP11.01□□□□□ -0.65
THBS3-211ENST00000541990 HCLS1P14317 486 aaPredicted RBP11.01□□□□□ -0.65
THBS3-211ENST00000541990 PPP4R3BQ5MIZ7 849 aa11.01□□□□□ -0.65
THBS3-211ENST00000541990 DCAF5Q96JK2 942 aa11.01□□□□□ -0.65
THBS3-211ENST00000541990 REC8O95072 547 aa11□□□□□ -0.65
THBS3-211ENST00000541990 ADCY5O95622 1261 aa11□□□□□ -0.65
THBS3-211ENST00000541990 PIGBQ92521 554 aa11□□□□□ -0.65
THBS3-211ENST00000541990 IL25Q9H293 177 aa11□□□□□ -0.65
THBS3-211ENST00000541990 ATP5J2-PTCD1G3V325 749 aa11□□□□□ -0.65
THBS3-211ENST00000541990 AP5Z1O43299 807 aa11□□□□□ -0.65
THBS3-211ENST00000541990 LARP6Q9BRS8 491 aaKnown RBP11□□□□□ -0.65
THBS3-211ENST00000541990 BCL2L12Q9HB09 334 aa11□□□□□ -0.65
THBS3-211ENST00000541990 NBPF7P0C2Y1 421 aaPredicted RBP10.99□□□□□ -0.65
THBS3-211ENST00000541990 CASC1Q6TDU7 716 aa10.99□□□□□ -0.65
THBS3-211ENST00000541990 USP54Q70EL1 1684 aa10.99□□□□□ -0.65
THBS3-211ENST00000541990 EXOC5O00471 708 aa10.99□□□□□ -0.65
THBS3-211ENST00000541990 PLCB2Q00722 1185 aa10.99□□□□□ -0.65
THBS3-211ENST00000541990 COPS6Q7L5N1 327 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms